Cow genome map
| Conread name: | Ss1.1-bliv-UMC-pblivv1-003-h10.3 |
| Conread position: | 1-180 |
| Cow position: | chrX:15433875-15434052 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 147, 52 |
| Conread position: | 4-143 |
| Cow position: | chrX:8796464-8796600 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 4-173 |
| Cow position: | chrX:45213693-45213526 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 144, 57 |
| Conread position: | 4-180 |
| Cow position: | chrX:6456668-6456842 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 144, 49 |
| Conread position: | 4-180 |
| Cow position: | chrX:16208425-16208252 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 144, 49 |
| Conread position: | 4-180 |
| Cow position: | chrX:16357757-16357931 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 144, 49 |
| Conread position: | 4-180 |
| Cow position: | chrX:23432016-23432190 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 4-180 |
| Cow position: | chrX:24502257-24502083 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 103, 49 |
| Conread position: | 4-180 |
| Cow position: | chrX:24510381-24510207 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 4-180 |
| Cow position: | chrX:29801852-29801678 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 129 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 4-180 |
| Cow position: | chrX:29810247-29810068 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 106, 49 |
| Conread position: | 6-179 |
| Cow position: | chrX:15491632-15491804 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 22, 48 |
| Conread position: | 6-180 |
| Cow position: | chrX:45815042-45815212 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 129 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 142, 47 |
| Conread position: | 44-291 |
| Cow position: | chrX:30471682-30471929 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 53-180 |
| Cow position: | chrX:26283079-26283205 (view UCSC Genome Browser custom track) |
| Alignm length: | 129 |
| Alignm identity: | 99 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 95, 100 |
| Conread position: | 279-391 |
| Cow position: | chrX:30471941-30472054 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 109 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 96, 0 |
Show alignments to all cow chromosomes.