Cow genome map
| Conread name: | Ss1.1-mA2-MI-P-A2-aaq-h-12-1-UM.s1.3.5 |
| Conread position: | 795-1404 |
| Cow position: | chr10:21939318-21938710 (view UCSC Genome Browser custom track) |
| Alignm length: | 616 |
| Alignm identity: | 362 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 96, 123 |
| Conread position: | 864-1325 |
| Cow position: | chr10:9010323-9009863 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 288 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 130, 17 |
| Conread position: | 864-1427 |
| Cow position: | chr10:21939317-21938769 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 349 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 141, 17 |
| Conread position: | 864-1458 |
| Cow position: | chr10:8996679-8996085 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 395 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 586, 17 |
| Conread position: | 866-1283 |
| Cow position: | chr10:9031248-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 420 |
| Alignm identity: | 238 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 57, 15 |
| Conread position: | 880-1446 |
| Cow position: | chr10:9010476-9009910 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 350 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 41, 32 |
| Conread position: | 881-1403 |
| Cow position: | chr10:9010391-9009869 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 320 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 118, 111 |
| Conread position: | 881-1404 |
| Cow position: | chr10:8996831-8996308 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 881-1458 |
| Cow position: | chr10:8996747-8996169 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 381 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 569, 0 |
| Conread position: | 881-1461 |
| Cow position: | chr10:8996579-8995998 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 391 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 213, 217 |
| Conread position: | 891-1398 |
| Cow position: | chr10:21939137-21938633 (view UCSC Genome Browser custom track) |
| Alignm length: | 510 |
| Alignm identity: | 308 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 123, 110 |
| Conread position: | 901-1448 |
| Cow position: | chr10:8996895-8996348 (view UCSC Genome Browser custom track) |
| Alignm length: | 550 |
| Alignm identity: | 364 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 426, 435 |
| Conread position: | 928-1457 |
| Cow position: | chr10:21939338-21938822 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 313 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 522, 114 |
| Conread position: | 940-1367 |
| Cow position: | chr10:9031237-9031664 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 214 |
| Conread position: | 946-1458 |
| Cow position: | chr10:8996934-8996421 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 272, 268 |
| Conread position: | 1012-1455 |
| Cow position: | chr10:9010512-9010068 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 315, 328 |
| Conread position: | 1018-1454 |
| Cow position: | chr10:9031231-9031667 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 65, 48 |
| Conread position: | 1053-1457 |
| Cow position: | chr10:9031182-9031587 (view UCSC Genome Browser custom track) |
| Alignm length: | 409 |
| Alignm identity: | 255 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 47, 42 |
| Conread position: | 1087-1409 |
| Cow position: | chr10:9010521-9010199 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 215 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1101-1456 |
| Cow position: | chr10:9010591-9010235 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 304, 313 |
Show alignments to all cow chromosomes.