Cow genome map
| Conread name: | Ss1.1-mA2-MI-P-A2-aaq-h-12-1-UM.s1.3.5 |
| Conread position: | 73-196 |
| Cow position: | chr14:25776407-25776530 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 98 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 78-200 |
| Cow position: | chr14:665822-665700 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 94 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 78-201 |
| Cow position: | chr14:3131090-3130967 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 96 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 846-1401 |
| Cow position: | chr14:25836117-25836668 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 17 |
| Conread position: | 846-1401 |
| Cow position: | chr14:25876473-25877024 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 218, 12 |
| Conread position: | 859-1406 |
| Cow position: | chr14:25859264-25859811 (view UCSC Genome Browser custom track) |
| Alignm length: | 554 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 15 |
| Conread position: | 859-1425 |
| Cow position: | chr14:25876315-25876880 (view UCSC Genome Browser custom track) |
| Alignm length: | 570 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 304, 22 |
| Conread position: | 862-1458 |
| Cow position: | chr14:25783343-25783939 (view UCSC Genome Browser custom track) |
| Alignm length: | 602 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 465, 19 |
| Conread position: | 863-1403 |
| Cow position: | chr14:3128106-3127567 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 342 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 18 |
| Conread position: | 864-1134 |
| Cow position: | chr14:25860529-25860798 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 59, 17 |
| Conread position: | 864-1238 |
| Cow position: | chr14:25910916-25911290 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 243 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 372, 17 |
| Conread position: | 864-1371 |
| Cow position: | chr14:25860277-25860783 (view UCSC Genome Browser custom track) |
| Alignm length: | 509 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 17 |
| Conread position: | 864-1401 |
| Cow position: | chr14:25836552-25837088 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 369, 17 |
| Conread position: | 864-1401 |
| Cow position: | chr14:25859437-25859973 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 17 |
| Conread position: | 864-1401 |
| Cow position: | chr14:25859689-25860225 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 17 |
| Conread position: | 864-1401 |
| Cow position: | chr14:25876572-25877108 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 17 |
| Conread position: | 864-1401 |
| Cow position: | chr14:25876740-25877276 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 17 |
| Conread position: | 864-1401 |
| Cow position: | chr14:25877328-25877864 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 17 |
| Conread position: | 864-1401 |
| Cow position: | chr14:25894947-25895483 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 331 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 42, 17 |
| Conread position: | 864-1403 |
| Cow position: | chr14:25836384-25836922 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 17 |
| Conread position: | 864-1403 |
| Cow position: | chr14:25860109-25860647 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 17 |
| Conread position: | 864-1403 |
| Cow position: | chr14:25877160-25877698 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 17 |
| Conread position: | 864-1406 |
| Cow position: | chr14:25859857-25860399 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 17 |
| Conread position: | 864-1406 |
| Cow position: | chr14:25876908-25877450 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 463, 17 |
| Conread position: | 864-1457 |
| Cow position: | chr14:25895787-25896380 (view UCSC Genome Browser custom track) |
| Alignm length: | 596 |
| Alignm identity: | 358 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 318, 17 |
| Conread position: | 865-1325 |
| Cow position: | chr14:25877413-25877872 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 16 |
| Conread position: | 865-1401 |
| Cow position: | chr14:25895452-25895987 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 335 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 58, 15 |
| Conread position: | 865-1404 |
| Cow position: | chr14:3155900-3156438 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 228, 16 |
| Conread position: | 865-1406 |
| Cow position: | chr14:25860194-25860735 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 16 |
| Conread position: | 865-1406 |
| Cow position: | chr14:25877245-25877786 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 16 |
| Conread position: | 868-1439 |
| Cow position: | chr14:3080925-3080355 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 12 |
| Conread position: | 872-1401 |
| Cow position: | chr14:3081005-3080477 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 321 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 34, 9 |
| Conread position: | 879-1326 |
| Cow position: | chr14:680826-681273 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 381, 374 |
| Conread position: | 879-1400 |
| Cow position: | chr14:447688-448209 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 40 |
| Conread position: | 879-1409 |
| Cow position: | chr14:25794999-25794469 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 50 |
| Conread position: | 881-1124 |
| Cow position: | chr14:25896223-25896463 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 157 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 183, 0 |
| Conread position: | 881-1157 |
| Cow position: | chr14:25911016-25911292 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 42, 49 |
| Conread position: | 881-1160 |
| Cow position: | chr14:680996-681275 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 210, 217 |
| Conread position: | 881-1194 |
| Cow position: | chr14:3127585-3127272 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 203 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 210, 217 |
| Conread position: | 881-1216 |
| Cow position: | chr14:3079989-3079652 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 44, 49 |
| Conread position: | 881-1231 |
| Cow position: | chr14:3100736-3100386 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 219 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 196, 214 |
| Conread position: | 881-1254 |
| Cow position: | chr14:3080073-3079700 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 881-1324 |
| Cow position: | chr14:447774-448217 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 260 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 212, 217 |
| Conread position: | 881-1324 |
| Cow position: | chr14:3127753-3127310 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 881-1366 |
| Cow position: | chr14:3155999-3156484 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 881-1380 |
| Cow position: | chr14:3080745-3080246 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 881-1380 |
| Cow position: | chr14:25794661-25794160 (view UCSC Genome Browser custom track) |
| Alignm length: | 502 |
| Alignm identity: | 307 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 328, 0 |
| Conread position: | 881-1384 |
| Cow position: | chr14:25836736-25837239 (view UCSC Genome Browser custom track) |
| Alignm length: | 507 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 115 |
| Conread position: | 881-1386 |
| Cow position: | chr14:25895887-25896392 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 317 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 881-1396 |
| Cow position: | chr14:25794913-25794398 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 315 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 881-1401 |
| Cow position: | chr14:25783445-25783965 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 28 |
| Conread position: | 881-1401 |
| Cow position: | chr14:25859369-25859889 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 211, 216 |
| Conread position: | 881-1401 |
| Cow position: | chr14:25860041-25860561 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 325 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 134, 127 |
| Conread position: | 881-1401 |
| Cow position: | chr14:25877092-25877612 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 127 |
| Conread position: | 881-1401 |
| Cow position: | chr14:25895215-25895735 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 318 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 293, 301 |
| Conread position: | 881-1402 |
| Cow position: | chr14:25859201-25859722 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 121, 130 |
| Conread position: | 881-1403 |
| Cow position: | chr14:680744-681266 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 465, 457 |
| Conread position: | 881-1403 |
| Cow position: | chr14:25836316-25836838 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 881-1404 |
| Cow position: | chr14:3080829-3080306 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 68, 56 |
| Conread position: | 881-1404 |
| Cow position: | chr14:3127837-3127314 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 446, 455 |
| Conread position: | 881-1404 |
| Cow position: | chr14:25795249-25794726 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 881-1409 |
| Cow position: | chr14:25784201-25784729 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 28 |
| Conread position: | 881-1409 |
| Cow position: | chr14:25794829-25794300 (view UCSC Genome Browser custom track) |
| Alignm length: | 532 |
| Alignm identity: | 330 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 289, 281 |
| Conread position: | 881-1410 |
| Cow position: | chr14:25784117-25784646 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 881-1431 |
| Cow position: | chr14:680240-680791 (view UCSC Genome Browser custom track) |
| Alignm length: | 555 |
| Alignm identity: | 326 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 378, 397 |
| Conread position: | 881-1439 |
| Cow position: | chr14:3080409-3079851 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 217 |
| Conread position: | 881-1439 |
| Cow position: | chr14:3080577-3080019 (view UCSC Genome Browser custom track) |
| Alignm length: | 561 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 301, 295 |
| Conread position: | 881-1439 |
| Cow position: | chr14:25795165-25794607 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 216 |
| Conread position: | 881-1440 |
| Cow position: | chr14:680492-681051 (view UCSC Genome Browser custom track) |
| Alignm length: | 560 |
| Alignm identity: | 338 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 881-1448 |
| Cow position: | chr14:3155594-3156146 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 353 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 217, 205 |
| Conread position: | 881-1451 |
| Cow position: | chr14:3080661-3080091 (view UCSC Genome Browser custom track) |
| Alignm length: | 574 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 446, 460 |
| Conread position: | 881-1451 |
| Cow position: | chr14:3156167-3156728 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 217 |
| Conread position: | 881-1457 |
| Cow position: | chr14:25876840-25877417 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 180, 190 |
| Conread position: | 881-1458 |
| Cow position: | chr14:680576-681154 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 283, 293 |
| Conread position: | 881-1458 |
| Cow position: | chr14:25783529-25784107 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 362 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 525, 543 |
| Conread position: | 881-1458 |
| Cow position: | chr14:25783697-25784275 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 544, 529 |
| Conread position: | 881-1458 |
| Cow position: | chr14:25836232-25836810 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 380 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 115 |
| Conread position: | 881-1458 |
| Cow position: | chr14:25876252-25876830 (view UCSC Genome Browser custom track) |
| Alignm length: | 582 |
| Alignm identity: | 354 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 49, 26 |
| Conread position: | 881-1462 |
| Cow position: | chr14:25783613-25784194 (view UCSC Genome Browser custom track) |
| Alignm length: | 583 |
| Alignm identity: | 371 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 212, 217 |
| Conread position: | 881-1541 |
| Cow position: | chr14:25783949-25784612 (view UCSC Genome Browser custom track) |
| Alignm length: | 665 |
| Alignm identity: | 413 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 569, 630 |
| Conread position: | 885-1406 |
| Cow position: | chr14:25836488-25837010 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 336 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 25 |
| Conread position: | 885-1439 |
| Cow position: | chr14:3128001-3127447 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 442, 461 |
| Conread position: | 886-1442 |
| Cow position: | chr14:25876425-25876979 (view UCSC Genome Browser custom track) |
| Alignm length: | 559 |
| Alignm identity: | 366 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 116, 127 |
| Conread position: | 887-1195 |
| Cow position: | chr14:447948-448256 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 194 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 256, 249 |
| Conread position: | 887-1324 |
| Cow position: | chr14:3061550-3061113 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 260 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 53, 48 |
| Conread position: | 887-1365 |
| Cow position: | chr14:3080151-3079673 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 887-1399 |
| Cow position: | chr14:3061718-3061206 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 305 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 43, 37 |
| Conread position: | 887-1451 |
| Cow position: | chr14:3155684-3156233 (view UCSC Genome Browser custom track) |
| Alignm length: | 569 |
| Alignm identity: | 345 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 280, 165 |
| Conread position: | 887-1453 |
| Cow position: | chr14:3061214-3060649 (view UCSC Genome Browser custom track) |
| Alignm length: | 572 |
| Alignm identity: | 333 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 123, 114 |
| Conread position: | 889-1404 |
| Cow position: | chr14:3128165-3127650 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 890-1239 |
| Cow position: | chr14:434004-434353 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 40, 36 |
| Conread position: | 890-1401 |
| Cow position: | chr14:25895392-25895903 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 328 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 125, 118 |
| Conread position: | 890-1403 |
| Cow position: | chr14:25895560-25896073 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 111 |
| Conread position: | 890-1404 |
| Cow position: | chr14:3061631-3061117 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 319 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 102, 108 |
| Conread position: | 890-1406 |
| Cow position: | chr14:25895308-25895825 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 315 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 125, 118 |
| Conread position: | 890-1434 |
| Cow position: | chr14:3080232-3079688 (view UCSC Genome Browser custom track) |
| Alignm length: | 546 |
| Alignm identity: | 328 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 204, 208 |
| Conread position: | 890-1447 |
| Cow position: | chr14:25836661-25837218 (view UCSC Genome Browser custom track) |
| Alignm length: | 562 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 101 |
| Conread position: | 895-1458 |
| Cow position: | chr14:25835910-25836474 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 344 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 28, 34 |
| Conread position: | 911-1406 |
| Cow position: | chr14:3100873-3100378 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 297 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 415, 8 |
| Conread position: | 914-1406 |
| Cow position: | chr14:25910799-25911290 (view UCSC Genome Browser custom track) |
| Alignm length: | 497 |
| Alignm identity: | 321 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 261, 22 |
| Conread position: | 917-1458 |
| Cow position: | chr14:25783901-25784443 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 486, 507 |
| Conread position: | 919-1439 |
| Cow position: | chr14:680194-680714 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 305 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 23, 17 |
| Conread position: | 929-1312 |
| Cow position: | chr14:25896019-25896402 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 929-1403 |
| Cow position: | chr14:3101438-3100968 (view UCSC Genome Browser custom track) |
| Alignm length: | 477 |
| Alignm identity: | 288 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 68, 85 |
| Conread position: | 929-1426 |
| Cow position: | chr14:25795453-25794956 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 306 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 156, 145 |
| Conread position: | 929-1458 |
| Cow position: | chr14:25836112-25836642 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 78 |
| Conread position: | 930-1401 |
| Cow position: | chr14:25835777-25836248 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 298 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 162, 167 |
| Conread position: | 936-1211 |
| Cow position: | chr14:420631-420906 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 937-1416 |
| Cow position: | chr14:25910740-25911217 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 310 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 50 |
| Conread position: | 937-1458 |
| Cow position: | chr14:25836036-25836558 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 331 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 71 |
| Conread position: | 938-1406 |
| Cow position: | chr14:25859678-25860147 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 68 |
| Conread position: | 938-1458 |
| Cow position: | chr14:25860014-25860535 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 123, 133 |
| Conread position: | 938-1458 |
| Cow position: | chr14:25877065-25877586 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 70 |
| Conread position: | 940-1403 |
| Cow position: | chr14:25894938-25895401 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 280 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 314, 303 |
| Conread position: | 941-1401 |
| Cow position: | chr14:25859177-25859637 (view UCSC Genome Browser custom track) |
| Alignm length: | 466 |
| Alignm identity: | 297 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 58, 38 |
| Conread position: | 941-1406 |
| Cow position: | chr14:25876228-25876694 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 282 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 179, 188 |
| Conread position: | 947-1325 |
| Cow position: | chr14:3061742-3061364 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 947-1374 |
| Cow position: | chr14:3155408-3155835 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 265 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 146, 151 |
| Conread position: | 959-1457 |
| Cow position: | chr14:3128179-3127680 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 456, 465 |
| Conread position: | 965-1439 |
| Cow position: | chr14:3155261-3155732 (view UCSC Genome Browser custom track) |
| Alignm length: | 476 |
| Alignm identity: | 290 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 19, 26 |
| Conread position: | 974-1451 |
| Cow position: | chr14:447531-448008 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 296 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 279, 292 |
| Conread position: | 1016-1404 |
| Cow position: | chr14:3155882-3156270 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 78, 82 |
| Conread position: | 1021-1446 |
| Cow position: | chr14:25876224-25876649 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 73, 54 |
| Conread position: | 1022-1398 |
| Cow position: | chr14:25859174-25859550 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 230 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1030-1404 |
| Cow position: | chr14:3061743-3061369 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 228 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 36, 49 |
| Conread position: | 1031-1404 |
| Cow position: | chr14:3155408-3155781 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 230 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 63, 67 |
| Conread position: | 1031-1452 |
| Cow position: | chr14:680222-680643 (view UCSC Genome Browser custom track) |
| Alignm length: | 425 |
| Alignm identity: | 260 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 62, 67 |
| Conread position: | 1096-1462 |
| Cow position: | chr14:25783324-25783690 (view UCSC Genome Browser custom track) |
| Alignm length: | 370 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 141, 154 |
| Conread position: | 1097-1447 |
| Cow position: | chr14:25795453-25795103 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 218 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1151-1401 |
| Cow position: | chr14:25783294-25783545 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 1199-1451 |
| Cow position: | chr14:3155408-3155660 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.