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Cow genome map

           
Conread name:
           
Ss1.1-mA2-MI-P-A2-aaq-h-12-1-UM.s1.3.5
        

               
Conread position:
               
70-218
               

               
Cow position:
               
chr18:52421800-52421948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
70-228
               

               
Cow position:
               
chr18:51396942-51397100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
71-174
               

               
Cow position:
               
chr18:51373597-51373494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
104
               

               
Alignm identity:
               
85
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
71-228
               

               
Cow position:
               
chr18:51796380-51796224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
71-228
               

               
Cow position:
               
chr18:51819668-51819512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
71-228
               

               
Cow position:
               
chr18:51867655-51867812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
71-230
               

               
Cow position:
               
chr18:51753302-51753142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
71-233
               

               
Cow position:
               
chr18:51844472-51844310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
73-196
               

               
Cow position:
               
chr18:52015242-52015119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
75-231
               

               
Cow position:
               
chr18:51771795-51771638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
78-210
               

               
Cow position:
               
chr18:50278858-50278990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
78-213
               

               
Cow position:
               
chr18:50653441-50653306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
78-215
               

               
Cow position:
               
chr18:49038975-49038837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
78-216
               

               
Cow position:
               
chr18:50077718-50077854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
80-218
               

               
Cow position:
               
chr18:52442029-52442167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
488-758
               

               
Cow position:
               
chr18:51368947-51368674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
220, 0
               

               
Conread position:
               
757-1371
               

               
Cow position:
               
chr18:44398142-44397511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
419
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 507
               

               
Conread position:
               
759-1459
               

               
Cow position:
               
chr18:51368638-51367922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
717
               

               
Alignm identity:
               
484
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
765-1318
               

               
Cow position:
               
chr18:51969479-51970037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 336
               

               
Conread position:
               
765-1452
               

               
Cow position:
               
chr18:51789503-51788799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
708
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 133
               

               
Conread position:
               
765-1465
               

               
Cow position:
               
chr18:51812662-51811946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
720
               

               
Alignm identity:
               
471
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 150
               

               
Conread position:
               
766-1420
               

               
Cow position:
               
chr18:51969163-51969812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
660
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 79
               

               
Conread position:
               
767-1240
               

               
Cow position:
               
chr18:43119931-43119442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
771-1539
               

               
Cow position:
               
chr18:51368373-51367587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
789
               

               
Alignm identity:
               
531
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 126
               

               
Conread position:
               
773-1447
               

               
Cow position:
               
chr18:55067047-55066358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
693
               

               
Alignm identity:
               
434
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 152
               

               
Conread position:
               
774-1321
               

               
Cow position:
               
chr18:50271609-50272170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
564
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
82, 408
               

               
Conread position:
               
774-1409
               

               
Cow position:
               
chr18:43120175-43119525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
651
               

               
Alignm identity:
               
412
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
775-1406
               

               
Cow position:
               
chr18:49033317-49032671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
649
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 262
               

               
Conread position:
               
775-1458
               

               
Cow position:
               
chr18:42791449-42792148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
702
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 333
               

               
Conread position:
               
776-1238
               

               
Cow position:
               
chr18:55523794-55524271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
61, 158
               

               
Conread position:
               
776-1290
               

               
Cow position:
               
chr18:44153804-44153289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
77, 67
               

               
Conread position:
               
776-1380
               

               
Cow position:
               
chr18:55523710-55524329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
623
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
63, 337
               

               
Conread position:
               
780-1401
               

               
Cow position:
               
chr18:51765928-51765292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
638
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 449
               

               
Conread position:
               
781-1410
               

               
Cow position:
               
chr18:51812561-51811917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 485
               

               
Conread position:
               
781-1425
               

               
Cow position:
               
chr18:51368531-51367872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
665
               

               
Alignm identity:
               
442
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 14
               

               
Conread position:
               
781-1448
               

               
Cow position:
               
chr18:51789402-51788720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
687
               

               
Alignm identity:
               
449
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
97, 133
               

               
Conread position:
               
781-1458
               

               
Cow position:
               
chr18:33064615-33063922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
696
               

               
Alignm identity:
               
440
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 410
               

               
Conread position:
               
781-1458
               

               
Cow position:
               
chr18:43093839-43093158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
688
               

               
Alignm identity:
               
441
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 112
               

               
Conread position:
               
781-1462
               

               
Cow position:
               
chr18:51812729-51812033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
700
               

               
Alignm identity:
               
457
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 116
               

               
Conread position:
               
782-1403
               

               
Cow position:
               
chr18:51752179-51751542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
641
               

               
Alignm identity:
               
424
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 483
               

               
Conread position:
               
783-1313
               

               
Cow position:
               
chr18:50099804-50100347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
47, 139
               

               
Conread position:
               
783-1401
               

               
Cow position:
               
chr18:42791961-42792594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
636
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 386
               

               
Conread position:
               
783-1413
               

               
Cow position:
               
chr18:50848828-50849473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
647
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 641
               

               
Conread position:
               
792-1428
               

               
Cow position:
               
chr18:51874061-51874705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
648
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
61, 52
               

               
Conread position:
               
831-1387
               

               
Cow position:
               
chr18:51838648-51838105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
838-1314
               

               
Cow position:
               
chr18:42693737-42693261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
20, 44
               

               
Conread position:
               
839-1464
               

               
Cow position:
               
chr18:40324987-40324364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
634
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 36
               

               
Conread position:
               
844-1461
               

               
Cow position:
               
chr18:43167775-43168390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
620
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
314, 16
               

               
Conread position:
               
844-1465
               

               
Cow position:
               
chr18:43167943-43168561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
624
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
559, 17
               

               
Conread position:
               
849-1238
               

               
Cow position:
               
chr18:50281660-50282050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
19, 26
               

               
Conread position:
               
857-1239
               

               
Cow position:
               
chr18:50048724-50048343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
184, 24
               

               
Conread position:
               
859-1427
               

               
Cow position:
               
chr18:56493752-56494324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
22, 159
               

               
Conread position:
               
860-1401
               

               
Cow position:
               
chr18:51789811-51789271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 21
               

               
Conread position:
               
860-1403
               

               
Cow position:
               
chr18:50099223-50099767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 132
               

               
Conread position:
               
860-1404
               

               
Cow position:
               
chr18:49022728-49023271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
276, 21
               

               
Conread position:
               
860-1406
               

               
Cow position:
               
chr18:51812970-51812425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 21
               

               
Conread position:
               
860-1410
               

               
Cow position:
               
chr18:40306501-40307053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 142
               

               
Conread position:
               
860-1447
               

               
Cow position:
               
chr18:50848082-50848667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
24, 55
               

               
Conread position:
               
860-1460
               

               
Cow position:
               
chr18:51812802-51812203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
399
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
860-1539
               

               
Cow position:
               
chr18:51969020-51969682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
682
               

               
Alignm identity:
               
436
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
590, 215
               

               
Conread position:
               
861-1423
               

               
Cow position:
               
chr18:50250918-50251476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
60, 20
               

               
Conread position:
               
861-1458
               

               
Cow position:
               
chr18:51789644-51789045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 298
               

               
Conread position:
               
861-1462
               

               
Cow position:
               
chr18:42791045-42791647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
605
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 295
               

               
Conread position:
               
863-1409
               

               
Cow position:
               
chr18:44153785-44153254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
19, 13
               

               
Conread position:
               
863-1462
               

               
Cow position:
               
chr18:42837935-42837336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
602
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 26
               

               
Conread position:
               
864-1221
               

               
Cow position:
               
chr18:42792562-42792918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
150, 16
               

               
Conread position:
               
864-1221
               

               
Cow position:
               
chr18:51400870-51401226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
285, 17
               

               
Conread position:
               
864-1221
               

               
Cow position:
               
chr18:51970425-51970774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
33, 17
               

               
Conread position:
               
864-1239
               

               
Cow position:
               
chr18:50030815-50030436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
57, 298
               

               
Conread position:
               
864-1251
               

               
Cow position:
               
chr18:51969677-51970054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
234, 17
               

               
Conread position:
               
864-1325
               

               
Cow position:
               
chr18:51838700-51838245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
135, 17
               

               
Conread position:
               
864-1401
               

               
Cow position:
               
chr18:42675319-42674783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 12
               

               
Conread position:
               
864-1401
               

               
Cow position:
               
chr18:50022233-50021691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
114, 17
               

               
Conread position:
               
864-1401
               

               
Cow position:
               
chr18:51367761-51367225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
864-1402
               

               
Cow position:
               
chr18:51789723-51789186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
373
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
400, 17
               

               
Conread position:
               
864-1402
               

               
Cow position:
               
chr18:51838784-51838252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
352, 17
               

               
Conread position:
               
864-1403
               

               
Cow position:
               
chr18:42792310-42792848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
470, 17
               

               
Conread position:
               
864-1403
               

               
Cow position:
               
chr18:50099313-50099851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 17
               

               
Conread position:
               
864-1406
               

               
Cow position:
               
chr18:50048885-50048344 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
864-1406
               

               
Cow position:
               
chr18:50099565-50100106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 17
               

               
Conread position:
               
864-1406
               

               
Cow position:
               
chr18:50245743-50246284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
51, 13
               

               
Conread position:
               
864-1406
               

               
Cow position:
               
chr18:51789219-51788678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
373, 8
               

               
Conread position:
               
864-1409
               

               
Cow position:
               
chr18:49032960-49032416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 17
               

               
Conread position:
               
864-1409
               

               
Cow position:
               
chr18:51969511-51970044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
472, 17
               

               
Conread position:
               
864-1409
               

               
Cow position:
               
chr18:52427551-52428095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 17
               

               
Conread position:
               
864-1410
               

               
Cow position:
               
chr18:52432900-52433445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 17
               

               
Conread position:
               
864-1413
               

               
Cow position:
               
chr18:50059033-50058487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 17
               

               
Conread position:
               
864-1446
               

               
Cow position:
               
chr18:55523394-55523975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 17
               

               
Conread position:
               
864-1447
               

               
Cow position:
               
chr18:51400534-51401116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
285, 17
               

               
Conread position:
               
864-1447
               

               
Cow position:
               
chr18:51752165-51751583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 17
               

               
Conread position:
               
864-1452
               

               
Cow position:
               
chr18:42791638-42792226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
591
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 17
               

               
Conread position:
               
864-1452
               

               
Cow position:
               
chr18:56247727-56247147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 17
               

               
Conread position:
               
864-1457
               

               
Cow position:
               
chr18:49033296-49032702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
577, 17
               

               
Conread position:
               
864-1458
               

               
Cow position:
               
chr18:43094157-43093578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
603
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
129, 12
               

               
Conread position:
               
864-1458
               

               
Cow position:
               
chr18:44398353-44397759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
598
               

               
Alignm identity:
               
403
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 23
               

               
Conread position:
               
864-1458
               

               
Cow position:
               
chr18:50246079-50246673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 17
               

               
Conread position:
               
864-1458
               

               
Cow position:
               
chr18:51368012-51367419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
401, 17
               

               
Conread position:
               
864-1458
               

               
Cow position:
               
chr18:51765660-51765066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 17
               

               
Conread position:
               
864-1458
               

               
Cow position:
               
chr18:51812882-51812288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
409
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 17
               

               
Conread position:
               
864-1458
               

               
Cow position:
               
chr18:51839475-51838881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
586, 17
               

               
Conread position:
               
864-1458
               

               
Cow position:
               
chr18:51969427-51970010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 17
               

               
Conread position:
               
864-1458
               

               
Cow position:
               
chr18:52447530-52448124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
552, 17
               

               
Conread position:
               
864-1460
               

               
Cow position:
               
chr18:51400618-51401213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
600
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
396, 17
               

               
Conread position:
               
864-1460
               

               
Cow position:
               
chr18:51789555-51788960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 17
               

               
Conread position:
               
864-1462
               

               
Cow position:
               
chr18:43093908-43093323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
604
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
18, 11
               

               
Conread position:
               
865-1320
               

               
Cow position:
               
chr18:50083789-50084243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 16
               

               
Conread position:
               
865-1373
               

               
Cow position:
               
chr18:50246332-50246839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
133, 16
               

               
Conread position:
               
865-1401
               

               
Cow position:
               
chr18:56316388-56316923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
50, 15
               

               
Conread position:
               
865-1404
               

               
Cow position:
               
chr18:33064851-33064313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 16
               

               
Conread position:
               
865-1404
               

               
Cow position:
               
chr18:50021977-50021436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
196, 16
               

               
Conread position:
               
865-1409
               

               
Cow position:
               
chr18:42985473-42984930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 16
               

               
Conread position:
               
865-1409
               

               
Cow position:
               
chr18:52427804-52428347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 16
               

               
Conread position:
               
865-1410
               

               
Cow position:
               
chr18:52433153-52433697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 16
               

               
Conread position:
               
865-1439
               

               
Cow position:
               
chr18:42693961-42693388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 16
               

               
Conread position:
               
865-1439
               

               
Cow position:
               
chr18:56316136-56316709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 16
               

               
Conread position:
               
865-1458
               

               
Cow position:
               
chr18:43120152-43119559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
599
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 16
               

               
Conread position:
               
865-1458
               

               
Cow position:
               
chr18:50083537-50084130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
368, 16
               

               
Conread position:
               
865-1458
               

               
Cow position:
               
chr18:52428140-52428733 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
395
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
585, 16
               

               
Conread position:
               
865-1458
               

               
Cow position:
               
chr18:52428392-52428985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 16
               

               
Conread position:
               
865-1458
               

               
Cow position:
               
chr18:52433321-52433914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
595
               

               
Alignm identity:
               
396
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
585, 16
               

               
Conread position:
               
865-1458
               

               
Cow position:
               
chr18:52433573-52434166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
404
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 16
               

               
Conread position:
               
865-1462
               

               
Cow position:
               
chr18:50848674-50849270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
601
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
469, 9
               

               
Conread position:
               
866-1397
               

               
Cow position:
               
chr18:51752247-51751717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
866-1448
               

               
Cow position:
               
chr18:49033378-49032797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
384, 14
               

               
Conread position:
               
866-1458
               

               
Cow position:
               
chr18:52447364-52447956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
584, 15
               

               
Conread position:
               
867-1456
               

               
Cow position:
               
chr18:54979564-54980154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
230, 218
               

               
Conread position:
               
868-1218
               

               
Cow position:
               
chr18:55066685-55066335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
875-1401
               

               
Cow position:
               
chr18:50083293-50083820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 375
               

               
Conread position:
               
875-1404
               

               
Cow position:
               
chr18:50271472-50272002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 129
               

               
Conread position:
               
876-1541
               

               
Cow position:
               
chr18:51789960-51789296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
672
               

               
Alignm identity:
               
420
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 5
               

               
Conread position:
               
878-1417
               

               
Cow position:
               
chr18:40306688-40307229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
136, 124
               

               
Conread position:
               
878-1449
               

               
Cow position:
               
chr18:50246260-50246831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
114, 136
               

               
Conread position:
               
879-1320
               

               
Cow position:
               
chr18:42827420-42827861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
879-1398
               

               
Cow position:
               
chr18:41948996-41948477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
879-1406
               

               
Cow position:
               
chr18:1417934-1418461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 23
               

               
Conread position:
               
879-1409
               

               
Cow position:
               
chr18:40086671-40086138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 71
               

               
Conread position:
               
879-1423
               

               
Cow position:
               
chr18:33092838-33092299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
35, 23
               

               
Conread position:
               
880-1172
               

               
Cow position:
               
chr18:50849192-50849484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
181, 190
               

               
Conread position:
               
880-1404
               

               
Cow position:
               
chr18:41949163-41948639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
880-1409
               

               
Cow position:
               
chr18:44253874-44253346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
249, 241
               

               
Conread position:
               
880-1410
               

               
Cow position:
               
chr18:54967052-54967582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
270, 278
               

               
Conread position:
               
880-1448
               

               
Cow position:
               
chr18:44240278-44240846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 191
               

               
Conread position:
               
880-1452
               

               
Cow position:
               
chr18:53586898-53586325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 29
               

               
Conread position:
               
880-1458
               

               
Cow position:
               
chr18:50059606-50059027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
338, 334
               

               
Conread position:
               
880-1462
               

               
Cow position:
               
chr18:44240026-44240608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
880-1526
               

               
Cow position:
               
chr18:55017897-55018546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
655
               

               
Alignm identity:
               
401
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 30
               

               
Conread position:
               
881-1122
               

               
Cow position:
               
chr18:51873718-51873959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
881-1150
               

               
Cow position:
               
chr18:52011837-52011568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
213, 217
               

               
Conread position:
               
881-1195
               

               
Cow position:
               
chr18:49032356-49032042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
113, 121
               

               
Conread position:
               
881-1200
               

               
Cow position:
               
chr18:56329161-56328842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
121, 133
               

               
Conread position:
               
881-1218
               

               
Cow position:
               
chr18:1418272-1418609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
881-1220
               

               
Cow position:
               
chr18:55523998-55524337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
34, 49
               

               
Conread position:
               
881-1229
               

               
Cow position:
               
chr18:50084056-50084406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
211, 257
               

               
Conread position:
               
881-1232
               

               
Cow position:
               
chr18:53610029-53609679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
34, 28
               

               
Conread position:
               
881-1239
               

               
Cow position:
               
chr18:50083888-50084246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
265, 274
               

               
Conread position:
               
881-1239
               

               
Cow position:
               
chr18:51765308-51764949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 62
               

               
Conread position:
               
881-1239
               

               
Cow position:
               
chr18:56316655-56317013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
317, 322
               

               
Conread position:
               
881-1243
               

               
Cow position:
               
chr18:51789035-51788673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
881-1246
               

               
Cow position:
               
chr18:51812278-51811913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
881-1246
               

               
Cow position:
               
chr18:51839207-51838842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
881-1266
               

               
Cow position:
               
chr18:51367577-51367193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
372, 0
               

               
Conread position:
               
881-1290
               

               
Cow position:
               
chr18:42827506-42827915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
881-1291
               

               
Cow position:
               
chr18:43048710-43048302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 28
               

               
Conread position:
               
881-1291
               

               
Cow position:
               
chr18:49021753-49022164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
41, 30
               

               
Conread position:
               
881-1293
               

               
Cow position:
               
chr18:44397917-44397505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
881-1295
               

               
Cow position:
               
chr18:44184364-44183950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
881-1296
               

               
Cow position:
               
chr18:14453270-14452855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
267, 274
               

               
Conread position:
               
881-1301
               

               
Cow position:
               
chr18:51400802-51401222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
881-1304
               

               
Cow position:
               
chr18:53586393-53585970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
202, 196
               

               
Conread position:
               
881-1311
               

               
Cow position:
               
chr18:52428575-52429004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
423, 0
               

               
Conread position:
               
881-1311
               

               
Cow position:
               
chr18:52433756-52434185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
423, 0
               

               
Conread position:
               
881-1313
               

               
Cow position:
               
chr18:44154097-44153672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
385, 111
               

               
Conread position:
               
881-1318
               

               
Cow position:
               
chr18:56433905-56434332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
33, 41
               

               
Conread position:
               
881-1319
               

               
Cow position:
               
chr18:52447966-52448406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
323, 0
               

               
Conread position:
               
881-1324
               

               
Cow position:
               
chr18:50099833-50100276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
206, 194
               

               
Conread position:
               
881-1325
               

               
Cow position:
               
chr18:51789119-51788675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
353, 371
               

               
Conread position:
               
881-1325
               

               
Cow position:
               
chr18:51839291-51838847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
881-1327
               

               
Cow position:
               
chr18:56494114-56494558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 122
               

               
Conread position:
               
881-1347
               

               
Cow position:
               
chr18:51874242-51874708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
881-1367
               

               
Cow position:
               
chr18:42984954-42984468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 18
               

               
Conread position:
               
881-1370
               

               
Cow position:
               
chr18:40306859-40307348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
881-1371
               

               
Cow position:
               
chr18:53560280-53560770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
203, 209
               

               
Conread position:
               
881-1372
               

               
Cow position:
               
chr18:42837582-42837091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 196
               

               
Conread position:
               
881-1374
               

               
Cow position:
               
chr18:40075209-40075702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
388, 410
               

               
Conread position:
               
881-1376
               

               
Cow position:
               
chr18:41198265-41198760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
441, 453
               

               
Conread position:
               
881-1377
               

               
Cow position:
               
chr18:42693862-42693366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
99, 117
               

               
Conread position:
               
881-1378
               

               
Cow position:
               
chr18:50271647-50272144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
454, 447
               

               
Conread position:
               
881-1379
               

               
Cow position:
               
chr18:41948826-41948327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
492, 0
               

               
Conread position:
               
881-1379
               

               
Cow position:
               
chr18:44184448-44183950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 196
               

               
Conread position:
               
881-1380
               

               
Cow position:
               
chr18:53559860-53560359 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
40, 36
               

               
Conread position:
               
881-1380
               

               
Cow position:
               
chr18:55018402-55018900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
49, 19
               

               
Conread position:
               
881-1387
               

               
Cow position:
               
chr18:43175002-43174496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 207
               

               
Conread position:
               
881-1392
               

               
Cow position:
               
chr18:56247543-56247043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
881-1396
               

               
Cow position:
               
chr18:51751981-51751470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
361, 377
               

               
Conread position:
               
881-1397
               

               
Cow position:
               
chr18:44154181-44153672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
113, 141
               

               
Conread position:
               
881-1397
               

               
Cow position:
               
chr18:44240111-44240627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 112
               

               
Conread position:
               
881-1398
               

               
Cow position:
               
chr18:42791318-42791835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
40, 36
               

               
Conread position:
               
881-1401
               

               
Cow position:
               
chr18:41949330-41948810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
881-1401
               

               
Cow position:
               
chr18:42724486-42723966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
134, 126
               

               
Conread position:
               
881-1401
               

               
Cow position:
               
chr18:42790982-42791502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 104
               

               
Conread position:
               
881-1401
               

               
Cow position:
               
chr18:42791906-42792426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
881-1401
               

               
Cow position:
               
chr18:42837666-42837146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 217
               

               
Conread position:
               
881-1401
               

               
Cow position:
               
chr18:44239859-44240379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 81
               

               
Conread position:
               
881-1401
               

               
Cow position:
               
chr18:50848857-50849377 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 213
               

               
Conread position:
               
881-1401
               

               
Cow position:
               
chr18:51766064-51765544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 189
               

               
Conread position:
               
881-1401
               

               
Cow position:
               
chr18:51839375-51838855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
881-1401
               

               
Cow position:
               
chr18:53498239-53498762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
24, 139
               

               
Conread position:
               
881-1401
               

               
Cow position:
               
chr18:53610365-53609845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
122, 111
               

               
Conread position:
               
881-1401
               

               
Cow position:
               
chr18:56329581-56329061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 217
               

               
Conread position:
               
881-1402
               

               
Cow position:
               
chr18:49033112-49032591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 217
               

               
Conread position:
               
881-1402
               

               
Cow position:
               
chr18:50059437-50058916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
116, 111
               

               
Conread position:
               
881-1402
               

               
Cow position:
               
chr18:53635354-53634835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
321, 0
               

               
Conread position:
               
881-1402
               

               
Cow position:
               
chr18:55067092-55066571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 29
               

               
Conread position:
               
881-1403
               

               
Cow position:
               
chr18:33064248-33063726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 43
               

               
Conread position:
               
881-1403
               

               
Cow position:
               
chr18:42960281-42959759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 126
               

               
Conread position:
               
881-1403
               

               
Cow position:
               
chr18:50083384-50083906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
881-1403
               

               
Cow position:
               
chr18:51765476-51764954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 123
               

               
Conread position:
               
881-1403
               

               
Cow position:
               
chr18:52447042-52447564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
323, 317
               

               
Conread position:
               
881-1404
               

               
Cow position:
               
chr18:1418020-1418543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
881-1404
               

               
Cow position:
               
chr18:33064332-33063809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 217
               

               
Conread position:
               
881-1404
               

               
Cow position:
               
chr18:33064416-33063893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 28
               

               
Conread position:
               
881-1404
               

               
Cow position:
               
chr18:33064668-33064145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 43
               

               
Conread position:
               
881-1404
               

               
Cow position:
               
chr18:33093088-33092565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
508, 514
               

               
Conread position:
               
881-1404
               

               
Cow position:
               
chr18:40306775-40307298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
115, 104
               

               
Conread position:
               
881-1404
               

               
Cow position:
               
chr18:41197509-41198032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
881-1404
               

               
Cow position:
               
chr18:42675135-42674612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
370, 363
               

               
Conread position:
               
881-1404
               

               
Cow position:
               
chr18:42675219-42674696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
881-1404
               

               
Cow position:
               
chr18:43093652-43093129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
881-1404
               

               
Cow position:
               
chr18:49032776-49032253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 104
               

               
Conread position:
               
881-1404
               

               
Cow position:
               
chr18:50246011-50246534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 26
               

               
Conread position:
               
881-1404
               

               
Cow position:
               
chr18:51400298-51400821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
524
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
881-1404
               

               
Cow position:
               
chr18:52012173-52011650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
31, 41
               

               
Conread position:
               
881-1404
               

               
Cow position:
               
chr18:53636110-53635587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
111, 130
               

               
Conread position:
               
881-1404
               

               
Cow position:
               
chr18:55497688-55497165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
134, 120
               

               
Conread position:
               
881-1404
               

               
Cow position:
               
chr18:56128055-56128578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
213, 217
               

               
Conread position:
               
881-1404
               

               
Cow position:
               
chr18:56329833-56329310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 217
               

               
Conread position:
               
881-1404
               

               
Cow position:
               
chr18:56330001-56329478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
127, 133
               

               
Conread position:
               
881-1406
               

               
Cow position:
               
chr18:40306187-40306712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 107
               

               
Conread position:
               
881-1406
               

               
Cow position:
               
chr18:42675051-42674526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
881-1406
               

               
Cow position:
               
chr18:42694196-42693672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
61, 12
               

               
Conread position:
               
881-1406
               

               
Cow position:
               
chr18:43093568-43093043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
881-1406
               

               
Cow position:
               
chr18:43120389-43119864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
881-1406
               

               
Cow position:
               
chr18:50098993-50099518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
881-1406
               

               
Cow position:
               
chr18:50848605-50849130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
881-1407
               

               
Cow position:
               
chr18:55523746-55524272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
116, 104
               

               
Conread position:
               
881-1409
               

               
Cow position:
               
chr18:40086412-40085894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
196, 212
               

               
Conread position:
               
881-1409
               

               
Cow position:
               
chr18:41948910-41948382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
881-1409
               

               
Cow position:
               
chr18:41949078-41948550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
881-1409
               

               
Cow position:
               
chr18:42837834-42837306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
881-1409
               

               
Cow position:
               
chr18:42959945-42959426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 0
               

               
Conread position:
               
881-1409
               

               
Cow position:
               
chr18:42985122-42984594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
881-1409
               

               
Cow position:
               
chr18:42985542-42985014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 48
               

               
Conread position:
               
881-1409
               

               
Cow position:
               
chr18:43022633-43022105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
881-1409
               

               
Cow position:
               
chr18:43022717-43022189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
881-1409
               

               
Cow position:
               
chr18:43022885-43022357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 21
               

               
Conread position:
               
881-1409
               

               
Cow position:
               
chr18:43022969-43022441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
881-1409
               

               
Cow position:
               
chr18:43023053-43022525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
471, 479
               

               
Conread position:
               
881-1409
               

               
Cow position:
               
chr18:43167894-43168422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
881-1409
               

               
Cow position:
               
chr18:44154436-44153906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 455
               

               
Conread position:
               
881-1409
               

               
Cow position:
               
chr18:44184700-44184172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 29
               

               
Conread position:
               
881-1409
               

               
Cow position:
               
chr18:44184784-44184256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
446, 453
               

               
Conread position:
               
881-1409
               

               
Cow position:
               
chr18:44240195-44240723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 29
               

               
Conread position:
               
881-1409
               

               
Cow position:
               
chr18:50848185-50848713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
79, 72
               

               
Conread position:
               
881-1409
               

               
Cow position:
               
chr18:51367828-51367301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 19
               

               
Conread position:
               
881-1409
               

               
Cow position:
               
chr18:52012341-52011813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
197, 217
               

               
Conread position:
               
881-1409
               

               
Cow position:
               
chr18:52427651-52428179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
881-1409
               

               
Cow position:
               
chr18:52427903-52428431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
881-1409
               

               
Cow position:
               
chr18:52433000-52433528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
881-1409
               

               
Cow position:
               
chr18:52447462-52447990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
268, 274
               

               
Conread position:
               
881-1410
               

               
Cow position:
               
chr18:42791150-42791679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 204
               

               
Conread position:
               
881-1410
               

               
Cow position:
               
chr18:42791402-42791931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 125
               

               
Conread position:
               
881-1410
               

               
Cow position:
               
chr18:42960197-42959677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 26
               

               
Conread position:
               
881-1410
               

               
Cow position:
               
chr18:52427735-52428264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 205
               

               
Conread position:
               
881-1410
               

               
Cow position:
               
chr18:52427987-52428516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
881-1410
               

               
Cow position:
               
chr18:52428071-52428600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 217
               

               
Conread position:
               
881-1410
               

               
Cow position:
               
chr18:52433252-52433781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 212
               

               
Conread position:
               
881-1412
               

               
Cow position:
               
chr18:40324446-40323916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 29
               

               
Conread position:
               
881-1412
               

               
Cow position:
               
chr18:44184532-44184001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 30
               

               
Conread position:
               
881-1413
               

               
Cow position:
               
chr18:14454002-14453470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
188, 214
               

               
Conread position:
               
881-1413
               

               
Cow position:
               
chr18:40306439-40306971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
56, 62
               

               
Conread position:
               
881-1413
               

               
Cow position:
               
chr18:42744615-42744083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
881-1413
               

               
Cow position:
               
chr18:50049209-50048673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 126
               

               
Conread position:
               
881-1413
               

               
Cow position:
               
chr18:56329413-56328881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 273
               

               
Conread position:
               
881-1414
               

               
Cow position:
               
chr18:53509256-53509789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
265, 292
               

               
Conread position:
               
881-1414
               

               
Cow position:
               
chr18:56493946-56494479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 48
               

               
Conread position:
               
881-1421
               

               
Cow position:
               
chr18:43175338-43174796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
262, 258
               

               
Conread position:
               
881-1428
               

               
Cow position:
               
chr18:41197593-41198140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 111
               

               
Conread position:
               
881-1434
               

               
Cow position:
               
chr18:56128139-56128692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
49, 43
               

               
Conread position:
               
881-1434
               

               
Cow position:
               
chr18:56128307-56128860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
134, 113
               

               
Conread position:
               
881-1436
               

               
Cow position:
               
chr18:52433084-52433639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 205
               

               
Conread position:
               
881-1436
               

               
Cow position:
               
chr18:52433420-52433975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
371
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
881-1436
               

               
Cow position:
               
chr18:56316067-56316622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
113, 122
               

               
Conread position:
               
881-1439
               

               
Cow position:
               
chr18:40324782-40324224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
178, 172
               

               
Conread position:
               
881-1439
               

               
Cow position:
               
chr18:56330085-56329527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 34
               

               
Conread position:
               
881-1441
               

               
Cow position:
               
chr18:50281776-50282336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
565
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
355, 385
               

               
Conread position:
               
881-1443
               

               
Cow position:
               
chr18:55008829-55009389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
34, 28
               

               
Conread position:
               
881-1446
               

               
Cow position:
               
chr18:33064752-33064187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 133
               

               
Conread position:
               
881-1446
               

               
Cow position:
               
chr18:40086586-40086017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 28
               

               
Conread position:
               
881-1447
               

               
Cow position:
               
chr18:44398085-44397519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
255, 261
               

               
Conread position:
               
881-1448
               

               
Cow position:
               
chr18:41198181-41198748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
118, 111
               

               
Conread position:
               
881-1448
               

               
Cow position:
               
chr18:41949246-41948679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 29
               

               
Conread position:
               
881-1448
               

               
Cow position:
               
chr18:42985038-42984471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
181, 193
               

               
Conread position:
               
881-1448
               

               
Cow position:
               
chr18:43175170-43174603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
513, 508
               

               
Conread position:
               
881-1448
               

               
Cow position:
               
chr18:49022498-49023063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
66, 71
               

               
Conread position:
               
881-1448
               

               
Cow position:
               
chr18:50049037-50048470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
117, 122
               

               
Conread position:
               
881-1449
               

               
Cow position:
               
chr18:33093004-33092436 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 111
               

               
Conread position:
               
881-1449
               

               
Cow position:
               
chr18:43022801-43022233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
570
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 203
               

               
Conread position:
               
881-1450
               

               
Cow position:
               
chr18:22634658-22635227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
531, 540
               

               
Conread position:
               
881-1451
               

               
Cow position:
               
chr18:49032692-49032122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 217
               

               
Conread position:
               
881-1451
               

               
Cow position:
               
chr18:56330169-56329599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
571
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
881-1451
               

               
Cow position:
               
chr18:56434147-56434717 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
40, 26
               

               
Conread position:
               
881-1452
               

               
Cow position:
               
chr18:44398169-44397597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
575
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
446, 452
               

               
Conread position:
               
881-1454
               

               
Cow position:
               
chr18:50083468-50084042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
366, 373
               

               
Conread position:
               
881-1455
               

               
Cow position:
               
chr18:50049121-50048547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
33, 38
               

               
Conread position:
               
881-1455
               

               
Cow position:
               
chr18:54979998-54980573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
202, 194
               

               
Conread position:
               
881-1456
               

               
Cow position:
               
chr18:43022549-43021973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
35, 27
               

               
Conread position:
               
881-1456
               

               
Cow position:
               
chr18:50848353-50848929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 133
               

               
Conread position:
               
881-1456
               

               
Cow position:
               
chr18:54993258-54993834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
32, 14
               

               
Conread position:
               
881-1457
               

               
Cow position:
               
chr18:14453918-14453341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
49, 42
               

               
Conread position:
               
881-1457
               

               
Cow position:
               
chr18:40306271-40306848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
35, 30
               

               
Conread position:
               
881-1457
               

               
Cow position:
               
chr18:42744447-42743870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 217
               

               
Conread position:
               
881-1457
               

               
Cow position:
               
chr18:42791990-42792567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
380, 372
               

               
Conread position:
               
881-1457
               

               
Cow position:
               
chr18:44398253-44397676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
393
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 277
               

               
Conread position:
               
881-1457
               

               
Cow position:
               
chr18:52447126-52447703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 185
               

               
Conread position:
               
881-1457
               

               
Cow position:
               
chr18:53509424-53509999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 194
               

               
Conread position:
               
881-1457
               

               
Cow position:
               
chr18:53525710-53526287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
265, 292
               

               
Conread position:
               
881-1457
               

               
Cow position:
               
chr18:53525878-53526453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 197
               

               
Conread position:
               
881-1457
               

               
Cow position:
               
chr18:54979914-54980490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
34, 21
               

               
Conread position:
               
881-1457
               

               
Cow position:
               
chr18:54993006-54993583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
346
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
202, 194
               

               
Conread position:
               
881-1457
               

               
Cow position:
               
chr18:54993426-54994000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 26
               

               
Conread position:
               
881-1458
               

               
Cow position:
               
chr18:40324866-40324289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
262, 257
               

               
Conread position:
               
881-1458
               

               
Cow position:
               
chr18:41197677-41198255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 273
               

               
Conread position:
               
881-1458
               

               
Cow position:
               
chr18:41197929-41198507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 228
               

               
Conread position:
               
881-1458
               

               
Cow position:
               
chr18:41198097-41198675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
569, 0
               

               
Conread position:
               
881-1458
               

               
Cow position:
               
chr18:42837750-42837172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 29
               

               
Conread position:
               
881-1458
               

               
Cow position:
               
chr18:42985206-42984628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
569, 0
               

               
Conread position:
               
881-1458
               

               
Cow position:
               
chr18:42985290-42984712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 27
               

               
Conread position:
               
881-1458
               

               
Cow position:
               
chr18:43093484-43092906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 212
               

               
Conread position:
               
881-1458
               

               
Cow position:
               
chr18:43120221-43119643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
379
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
569, 0
               

               
Conread position:
               
881-1458
               

               
Cow position:
               
chr18:43175086-43174508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 205
               

               
Conread position:
               
881-1458
               

               
Cow position:
               
chr18:43175254-43174676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
379, 372
               

               
Conread position:
               
881-1458
               

               
Cow position:
               
chr18:43175506-43174928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 169
               

               
Conread position:
               
881-1458
               

               
Cow position:
               
chr18:43175590-43175012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
525, 544
               

               
Conread position:
               
881-1458
               

               
Cow position:
               
chr18:44154013-44153454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
37, 32
               

               
Conread position:
               
881-1458
               

               
Cow position:
               
chr18:44184868-44184290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 124
               

               
Conread position:
               
881-1458
               

               
Cow position:
               
chr18:44398421-44397843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 273
               

               
Conread position:
               
881-1458
               

               
Cow position:
               
chr18:50022133-50021549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
58, 206
               

               
Conread position:
               
881-1458
               

               
Cow position:
               
chr18:50295206-50295783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 149
               

               
Conread position:
               
881-1458
               

               
Cow position:
               
chr18:51367912-51367336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
111, 104
               

               
Conread position:
               
881-1458
               

               
Cow position:
               
chr18:51400382-51400960 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
386
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
569, 0
               

               
Conread position:
               
881-1458
               

               
Cow position:
               
chr18:51765728-51765150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 198
               

               
Conread position:
               
881-1458
               

               
Cow position:
               
chr18:51765896-51765318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 133
               

               
Conread position:
               
881-1458
               

               
Cow position:
               
chr18:51789875-51789297 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
75, 81
               

               
Conread position:
               
881-1458
               

               
Cow position:
               
chr18:51813034-51812456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
534, 519
               

               
Conread position:
               
881-1458
               

               
Cow position:
               
chr18:51839543-51838965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
532, 519
               

               
Conread position:
               
881-1458
               

               
Cow position:
               
chr18:52447630-52448208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
569, 0
               

               
Conread position:
               
881-1458
               

               
Cow position:
               
chr18:54993090-54993668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
33, 21
               

               
Conread position:
               
881-1459
               

               
Cow position:
               
chr18:42744531-42743953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 29
               

               
Conread position:
               
881-1459
               

               
Cow position:
               
chr18:50059101-50058523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
196, 205
               

               
Conread position:
               
881-1459
               

               
Cow position:
               
chr18:56128727-56129303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
438, 405
               

               
Conread position:
               
881-1460
               

               
Cow position:
               
chr18:42744363-42743784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
382
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 209
               

               
Conread position:
               
881-1461
               

               
Cow position:
               
chr18:33064164-33063584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
374
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 274
               

               
Conread position:
               
881-1461
               

               
Cow position:
               
chr18:42791486-42792066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
379, 372
               

               
Conread position:
               
881-1462
               

               
Cow position:
               
chr18:43093400-43092819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
881-1462
               

               
Cow position:
               
chr18:49022330-49022909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
582
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
246, 0
               

               
Conread position:
               
881-1462
               

               
Cow position:
               
chr18:51874081-51874655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
370
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
532, 78
               

               
Conread position:
               
881-1462
               

               
Cow position:
               
chr18:52446958-52447539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
362, 368
               

               
Conread position:
               
881-1462
               

               
Cow position:
               
chr18:52447714-52448296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
569, 0
               

               
Conread position:
               
881-1463
               

               
Cow position:
               
chr18:50271563-50272145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
585
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 41
               

               
Conread position:
               
881-1464
               

               
Cow position:
               
chr18:42674967-42674383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
589
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 28
               

               
Conread position:
               
881-1465
               

               
Cow position:
               
chr18:52428323-52428907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
387
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 194
               

               
Conread position:
               
881-1465
               

               
Cow position:
               
chr18:52433504-52434088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
380
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 217
               

               
Conread position:
               
881-1526
               

               
Cow position:
               
chr18:54967557-54968200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
654
               

               
Alignm identity:
               
385
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
34, 18
               

               
Conread position:
               
881-1534
               

               
Cow position:
               
chr18:55018150-55018807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
662
               

               
Alignm identity:
               
398
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
34, 26
               

               
Conread position:
               
881-1540
               

               
Cow position:
               
chr18:52428239-52428901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
664
               

               
Alignm identity:
               
428
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
569, 613
               

               
Conread position:
               
881-1541
               

               
Cow position:
               
chr18:40324614-40323951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
669
               

               
Alignm identity:
               
411
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 92
               

               
Conread position:
               
881-1541
               

               
Cow position:
               
chr18:41197761-41198424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
664
               

               
Alignm identity:
               
426
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
569, 0
               

               
Conread position:
               
881-1541
               

               
Cow position:
               
chr18:42744699-42744036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
668
               

               
Alignm identity:
               
427
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 48
               

               
Conread position:
               
881-1541
               

               
Cow position:
               
chr18:42791738-42792401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
665
               

               
Alignm identity:
               
422
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 88
               

               
Conread position:
               
881-1541
               

               
Cow position:
               
chr18:51839123-51838443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
683
               

               
Alignm identity:
               
413
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
339, 532
               

               
Conread position:
               
881-1541
               

               
Cow position:
               
chr18:52447294-52447957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
666
               

               
Alignm identity:
               
429
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 26
               

               
Conread position:
               
882-1372
               

               
Cow position:
               
chr18:53498496-53498986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
21, 14
               

               
Conread position:
               
882-1458
               

               
Cow position:
               
chr18:42675551-42674977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 13
               

               
Conread position:
               
882-1458
               

               
Cow position:
               
chr18:51813114-51812540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
98, 64
               

               
Conread position:
               
882-1459
               

               
Cow position:
               
chr18:44154348-44153778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 47
               

               
Conread position:
               
882-1462
               

               
Cow position:
               
chr18:52447211-52447791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 154
               

               
Conread position:
               
883-1404
               

               
Cow position:
               
chr18:42790900-42791421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
350, 363
               

               
Conread position:
               
883-1457
               

               
Cow position:
               
chr18:1417854-1418429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
268, 272
               

               
Conread position:
               
883-1457
               

               
Cow position:
               
chr18:33064918-33064342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 267
               

               
Conread position:
               
883-1462
               

               
Cow position:
               
chr18:44253951-44253376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
329, 44
               

               
Conread position:
               
885-1401
               

               
Cow position:
               
chr18:42675383-42674867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
885-1404
               

               
Cow position:
               
chr18:42792246-42792765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
885-1460
               

               
Cow position:
               
chr18:51752313-51751738 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
578
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 181
               

               
Conread position:
               
885-1541
               

               
Cow position:
               
chr18:50848441-50849100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
661
               

               
Alignm identity:
               
406
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
581, 618
               

               
Conread position:
               
886-1239
               

               
Cow position:
               
chr18:49032435-49032082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
886-1374
               

               
Cow position:
               
chr18:50295463-50295947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
413, 0
               

               
Conread position:
               
886-1375
               

               
Cow position:
               
chr18:50295379-50295868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
105, 117
               

               
Conread position:
               
886-1401
               

               
Cow position:
               
chr18:56128480-56128995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
114, 106
               

               
Conread position:
               
886-1402
               

               
Cow position:
               
chr18:49032855-49032339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
886-1402
               

               
Cow position:
               
chr18:53635685-53635169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 106
               

               
Conread position:
               
886-1461
               

               
Cow position:
               
chr18:50083221-50083796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
48, 66
               

               
Conread position:
               
887-1292
               

               
Cow position:
               
chr18:1418194-1418599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
887-1321
               

               
Cow position:
               
chr18:52011999-52011565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
32, 23
               

               
Conread position:
               
887-1324
               

               
Cow position:
               
chr18:42792416-42792853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
887-1327
               

               
Cow position:
               
chr18:53610107-53609667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
36, 30
               

               
Conread position:
               
887-1335
               

               
Cow position:
               
chr18:1418110-1418558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 60
               

               
Conread position:
               
887-1351
               

               
Cow position:
               
chr18:50281866-50282330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
265, 271
               

               
Conread position:
               
887-1399
               

               
Cow position:
               
chr18:56316325-56316837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
112, 106
               

               
Conread position:
               
887-1401
               

               
Cow position:
               
chr18:42960437-42959929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
28, 22
               

               
Conread position:
               
887-1402
               

               
Cow position:
               
chr18:53560034-53560549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
127, 114
               

               
Conread position:
               
887-1406
               

               
Cow position:
               
chr18:53587059-53586540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
108, 119
               

               
Conread position:
               
887-1409
               

               
Cow position:
               
chr18:44239781-44240303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
30, 21
               

               
Conread position:
               
887-1419
               

               
Cow position:
               
chr18:56329743-56329211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 206
               

               
Conread position:
               
887-1425
               

               
Cow position:
               
chr18:50083726-50084264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 116
               

               
Conread position:
               
887-1434
               

               
Cow position:
               
chr18:53610443-53609896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
887-1434
               

               
Cow position:
               
chr18:53636020-53635473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
207, 198
               

               
Conread position:
               
887-1439
               

               
Cow position:
               
chr18:42694024-42693472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
93, 99
               

               
Conread position:
               
887-1446
               

               
Cow position:
               
chr18:40075047-40075606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 179
               

               
Conread position:
               
887-1446
               

               
Cow position:
               
chr18:40075131-40075690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
283, 275
               

               
Conread position:
               
887-1457
               

               
Cow position:
               
chr18:53635600-53635029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 43
               

               
Conread position:
               
887-1457
               

               
Cow position:
               
chr18:56493868-56494439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
574
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
34, 29
               

               
Conread position:
               
887-1458
               

               
Cow position:
               
chr18:43094053-43093494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
576
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
47, 28
               

               
Conread position:
               
887-1458
               

               
Cow position:
               
chr18:51400472-51401044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
390
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
563, 0
               

               
Conread position:
               
887-1462
               

               
Cow position:
               
chr18:53525800-53526375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
580
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
19, 28
               

               
Conread position:
               
887-1463
               

               
Cow position:
               
chr18:42693520-42692943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
584
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
55, 51
               

               
Conread position:
               
887-1463
               

               
Cow position:
               
chr18:56128565-56129141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
581
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
38, 43
               

               
Conread position:
               
887-1468
               

               
Cow position:
               
chr18:55523332-55523914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
590
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
205, 211
               

               
Conread position:
               
888-1526
               

               
Cow position:
               
chr18:55008502-55009141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
646
               

               
Alignm identity:
               
378
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
210, 54
               

               
Conread position:
               
889-1213
               

               
Cow position:
               
chr18:42827598-42827922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
107, 94
               

               
Conread position:
               
889-1458
               

               
Cow position:
               
chr18:51765972-51765402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
451, 428
               

               
Conread position:
               
890-1292
               

               
Cow position:
               
chr18:42792503-42792905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
890-1324
               

               
Cow position:
               
chr18:50021869-50021432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
26, 17
               

               
Conread position:
               
890-1402
               

               
Cow position:
               
chr18:50848782-50849294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
401, 408
               

               
Conread position:
               
890-1410
               

               
Cow position:
               
chr18:42792167-42792687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
890-1414
               

               
Cow position:
               
chr18:56434324-56434847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
10, 30
               

               
Conread position:
               
890-1439
               

               
Cow position:
               
chr18:53498338-53498887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
31, 17
               

               
Conread position:
               
890-1452
               

               
Cow position:
               
chr18:53559953-53560516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
567
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
184, 176
               

               
Conread position:
               
890-1458
               

               
Cow position:
               
chr18:40324521-40323952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
572
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
36, 40
               

               
Conread position:
               
890-1459
               

               
Cow position:
               
chr18:50295299-50295868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
573
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
444, 451
               

               
Conread position:
               
890-1526
               

               
Cow position:
               
chr18:55017823-55018462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
645
               

               
Alignm identity:
               
384
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
23, 28
               

               
Conread position:
               
890-1541
               

               
Cow position:
               
chr18:43120296-43119642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
660
               

               
Alignm identity:
               
416
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
275, 262
               

               
Conread position:
               
891-1239
               

               
Cow position:
               
chr18:49022926-49023274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
202, 207
               

               
Conread position:
               
894-1410
               

               
Cow position:
               
chr18:50098921-50099438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
21, 97
               

               
Conread position:
               
895-1458
               

               
Cow position:
               
chr18:51400228-51400792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
566
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
92, 101
               

               
Conread position:
               
896-1317
               

               
Cow position:
               
chr18:51367646-51367225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
896-1318
               

               
Cow position:
               
chr18:50058834-50058413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
46, 42
               

               
Conread position:
               
896-1439
               

               
Cow position:
               
chr18:50059338-50058795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
896-1448
               

               
Cow position:
               
chr18:50022457-50021899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
561
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
41, 121
               

               
Conread position:
               
896-1462
               

               
Cow position:
               
chr18:50059674-50059108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
568
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
466, 461
               

               
Conread position:
               
902-1457
               

               
Cow position:
               
chr18:54979515-54980071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
59, 50
               

               
Conread position:
               
903-1380
               

               
Cow position:
               
chr18:42694093-42693615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
12, 84
               

               
Conread position:
               
912-1458
               

               
Cow position:
               
chr18:51874028-51874568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
364
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
536, 131
               

               
Conread position:
               
913-1539
               

               
Cow position:
               
chr18:51968992-51969600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
633
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
111, 27
               

               
Conread position:
               
913-1541
               

               
Cow position:
               
chr18:44184920-44184289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
634
               

               
Alignm identity:
               
392
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 176
               

               
Conread position:
               
914-1401
               

               
Cow position:
               
chr18:50281641-50282128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
24, 38
               

               
Conread position:
               
917-1404
               

               
Cow position:
               
chr18:52012389-52011902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
170, 161
               

               
Conread position:
               
920-1243
               

               
Cow position:
               
chr18:42959747-42959424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
920-1448
               

               
Cow position:
               
chr18:41949375-41948847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 19
               

               
Conread position:
               
921-1456
               

               
Cow position:
               
chr18:53560152-53560688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 84
               

               
Conread position:
               
923-1386
               

               
Cow position:
               
chr18:51970316-51970771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
142, 56
               

               
Conread position:
               
923-1448
               

               
Cow position:
               
chr18:42790856-42791381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 22
               

               
Conread position:
               
924-1404
               

               
Cow position:
               
chr18:43023094-43022614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
331, 325
               

               
Conread position:
               
926-1406
               

               
Cow position:
               
chr18:14454041-14453561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
168, 172
               

               
Conread position:
               
927-1399
               

               
Cow position:
               
chr18:44253336-44252872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
317, 225
               

               
Conread position:
               
927-1406
               

               
Cow position:
               
chr18:54967267-54967743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
58, 63
               

               
Conread position:
               
927-1406
               

               
Cow position:
               
chr18:54979792-54980271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
58, 63
               

               
Conread position:
               
927-1456
               

               
Cow position:
               
chr18:54992800-54993330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
72, 57
               

               
Conread position:
               
928-1235
               

               
Cow position:
               
chr18:42724271-42723964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
66, 75
               

               
Conread position:
               
928-1241
               

               
Cow position:
               
chr18:40085955-40085641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
208, 0
               

               
Conread position:
               
928-1321
               

               
Cow position:
               
chr18:55008792-55009185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
153, 147
               

               
Conread position:
               
928-1396
               

               
Cow position:
               
chr18:44239990-44240458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 73
               

               
Conread position:
               
928-1403
               

               
Cow position:
               
chr18:50245974-50246449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
63, 94
               

               
Conread position:
               
928-1404
               

               
Cow position:
               
chr18:40075004-40075480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
304, 321
               

               
Conread position:
               
929-1325
               

               
Cow position:
               
chr18:54968104-54968500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
6e-26
               

               
Alignm gaps (pig, cow):
               
75, 55
               

               
Conread position:
               
929-1401
               

               
Cow position:
               
chr18:55523710-55524182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
160, 145
               

               
Conread position:
               
929-1402
               

               
Cow position:
               
chr18:40074921-40075394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 109
               

               
Conread position:
               
929-1405
               

               
Cow position:
               
chr18:53498035-53498514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
262, 326
               

               
Conread position:
               
929-1409
               

               
Cow position:
               
chr18:53586513-53586033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 77
               

               
Conread position:
               
929-1415
               

               
Cow position:
               
chr18:56434111-56434597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
72, 84
               

               
Conread position:
               
929-1446
               

               
Cow position:
               
chr18:54967938-54968453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
159, 93
               

               
Conread position:
               
929-1456
               

               
Cow position:
               
chr18:53559824-53560352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
76, 72
               

               
Conread position:
               
929-1456
               

               
Cow position:
               
chr18:54966933-54967461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
75, 90
               

               
Conread position:
               
929-1457
               

               
Cow position:
               
chr18:43167774-43168304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
474, 484
               

               
Conread position:
               
929-1458
               

               
Cow position:
               
chr18:56247747-56247225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
474, 236
               

               
Conread position:
               
932-1447
               

               
Cow position:
               
chr18:42985575-42985060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 82
               

               
Conread position:
               
933-1409
               

               
Cow position:
               
chr18:40086194-40085725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
460, 183
               

               
Conread position:
               
934-1456
               

               
Cow position:
               
chr18:54979463-54979986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
228, 240
               

               
Conread position:
               
936-1406
               

               
Cow position:
               
chr18:33093117-33092646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 10
               

               
Conread position:
               
936-1406
               

               
Cow position:
               
chr18:43048739-43048270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 229
               

               
Conread position:
               
936-1458
               

               
Cow position:
               
chr18:44239746-44240269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
497, 491
               

               
Conread position:
               
939-1447
               

               
Cow position:
               
chr18:42827397-42827904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
467, 6
               

               
Conread position:
               
939-1448
               

               
Cow position:
               
chr18:53610223-53609714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
153, 146
               

               
Conread position:
               
939-1452
               

               
Cow position:
               
chr18:44398447-44397933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 18
               

               
Conread position:
               
939-1457
               

               
Cow position:
               
chr18:53635716-53635197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
467, 481
               

               
Conread position:
               
939-1457
               

               
Cow position:
               
chr18:56128449-56128968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
466, 481
               

               
Conread position:
               
940-1421
               

               
Cow position:
               
chr18:40306666-40307147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
152, 146
               

               
Conread position:
               
940-1451
               

               
Cow position:
               
chr18:1417827-1418338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
514
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
348, 342
               

               
Conread position:
               
940-1458
               

               
Cow position:
               
chr18:51752341-51751823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 13
               

               
Conread position:
               
941-1402
               

               
Cow position:
               
chr18:50848329-50848790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
941-1425
               

               
Cow position:
               
chr18:53509232-53509716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
166, 160
               

               
Conread position:
               
941-1425
               

               
Cow position:
               
chr18:53525686-53526170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
166, 160
               

               
Conread position:
               
941-1439
               

               
Cow position:
               
chr18:51766087-51765590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 9
               

               
Conread position:
               
941-1448
               

               
Cow position:
               
chr18:55067116-55066609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
513
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 59
               

               
Conread position:
               
941-1451
               

               
Cow position:
               
chr18:52012448-52011939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
229, 44
               

               
Conread position:
               
941-1458
               

               
Cow position:
               
chr18:50059125-50058607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
509, 0
               

               
Conread position:
               
942-1448
               

               
Cow position:
               
chr18:42744722-42744216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
508
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
473, 491
               

               
Conread position:
               
942-1452
               

               
Cow position:
               
chr18:33064943-33064432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
292, 307
               

               
Conread position:
               
944-1323
               

               
Cow position:
               
chr18:56248239-56247869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
45, 15
               

               
Conread position:
               
945-1457
               

               
Cow position:
               
chr18:52446938-52447451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
321, 297
               

               
Conread position:
               
947-1239
               

               
Cow position:
               
chr18:51838371-51838084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
69, 62
               

               
Conread position:
               
947-1376
               

               
Cow position:
               
chr18:14453288-14452859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
947-1406
               

               
Cow position:
               
chr18:33065022-33064563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
80, 72
               

               
Conread position:
               
947-1409
               

               
Cow position:
               
chr18:52432898-52433360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 51
               

               
Conread position:
               
947-1410
               

               
Cow position:
               
chr18:52427549-52428012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
947-1417
               

               
Cow position:
               
chr18:51838786-51838320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
124, 117
               

               
Conread position:
               
947-1434
               

               
Cow position:
               
chr18:56316049-56316536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
388, 369
               

               
Conread position:
               
947-1462
               

               
Cow position:
               
chr18:53587083-53586568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
521
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
52, 45
               

               
Conread position:
               
948-1401
               

               
Cow position:
               
chr18:53636128-53635674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
15, 55
               

               
Conread position:
               
948-1414
               

               
Cow position:
               
chr18:56128037-56128506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
15, 55
               

               
Conread position:
               
949-1404
               

               
Cow position:
               
chr18:56330185-56329730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
377, 395
               

               
Conread position:
               
951-1458
               

               
Cow position:
               
chr18:43120403-43119895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
512
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
66, 29
               

               
Conread position:
               
954-1457
               

               
Cow position:
               
chr18:56247808-56247310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
509
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
17, 306
               

               
Conread position:
               
958-1462
               

               
Cow position:
               
chr18:51839550-51839046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
5.60519e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
961-1406
               

               
Cow position:
               
chr18:41197505-41197950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
961-1428
               

               
Cow position:
               
chr18:50098905-50099372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
137, 132
               

               
Conread position:
               
968-1458
               

               
Cow position:
               
chr18:42675384-42674893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
482, 0
               

               
Conread position:
               
972-1413
               

               
Cow position:
               
chr18:49022673-49023112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
164, 12
               

               
Conread position:
               
973-1458
               

               
Cow position:
               
chr18:43094213-43093734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
151, 29
               

               
Conread position:
               
985-1213
               

               
Cow position:
               
chr18:43053421-43053193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
986-1406
               

               
Cow position:
               
chr18:50059668-50059247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
423
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
161, 168
               

               
Conread position:
               
995-1462
               

               
Cow position:
               
chr18:51874027-51874487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 91
               

               
Conread position:
               
998-1355
               

               
Cow position:
               
chr18:51873670-51874024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
1004-1448
               

               
Cow position:
               
chr18:42985587-42985143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
58, 86
               

               
Conread position:
               
1012-1458
               

               
Cow position:
               
chr18:40074920-40075367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
79, 85
               

               
Conread position:
               
1012-1534
               

               
Cow position:
               
chr18:55017777-55018302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
65, 85
               

               
Conread position:
               
1013-1398
               

               
Cow position:
               
chr18:53610485-53610100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1013-1406
               

               
Cow position:
               
chr18:44253334-44252942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 0
               

               
Conread position:
               
1013-1539
               

               
Cow position:
               
chr18:22634540-22635066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
39, 76
               

               
Conread position:
               
1016-1449
               

               
Cow position:
               
chr18:43023086-43022653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
239, 227
               

               
Conread position:
               
1017-1414
               

               
Cow position:
               
chr18:44398453-44398057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 138
               

               
Conread position:
               
1017-1448
               

               
Cow position:
               
chr18:52427535-52427966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1017-1458
               

               
Cow position:
               
chr18:52432884-52433326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
433, 0
               

               
Conread position:
               
1017-1552
               

               
Cow position:
               
chr18:42827390-42827928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
18, 10
               

               
Conread position:
               
1018-1437
               

               
Cow position:
               
chr18:56316036-56316455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
14, 6
               

               
Conread position:
               
1019-1406
               

               
Cow position:
               
chr18:33093118-33092731 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1019-1458
               

               
Cow position:
               
chr18:51766093-51765654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
431, 15
               

               
Conread position:
               
1019-1460
               

               
Cow position:
               
chr18:44239745-44240186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1025-1404
               

               
Cow position:
               
chr18:56315875-56316254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
85, 95
               

               
Conread position:
               
1031-1427
               

               
Cow position:
               
chr18:51838786-51838395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
187, 182
               

               
Conread position:
               
1031-1462
               

               
Cow position:
               
chr18:14453288-14452856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
67, 55
               

               
Conread position:
               
1034-1455
               

               
Cow position:
               
chr18:50271464-50271885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
64, 59
               

               
Conread position:
               
1037-1462
               

               
Cow position:
               
chr18:50083288-50083713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
369, 383
               

               
Conread position:
               
1038-1410
               

               
Cow position:
               
chr18:40306175-40306549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
1042-1401
               

               
Cow position:
               
chr18:55523319-55523678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
56, 42
               

               
Conread position:
               
1045-1404
               

               
Cow position:
               
chr18:53636114-53635755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1046-1409
               

               
Cow position:
               
chr18:43175593-43175230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
296, 269
               

               
Conread position:
               
1046-1414
               

               
Cow position:
               
chr18:53610536-53610166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
31, 42
               

               
Conread position:
               
1047-1462
               

               
Cow position:
               
chr18:43175667-43175261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
280, 74
               

               
Conread position:
               
1054-1325
               

               
Cow position:
               
chr18:50031043-50030774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
54, 62
               

               
Conread position:
               
1061-1541
               

               
Cow position:
               
chr18:51766133-51765653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
38, 25
               

               
Conread position:
               
1070-1374
               

               
Cow position:
               
chr18:51873658-51873959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-20
               

               
Alignm gaps (pig, cow):
               
24, 29
               

               
Conread position:
               
1081-1461
               

               
Cow position:
               
chr18:43094189-43093816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
127, 5
               

               
Conread position:
               
1082-1404
               

               
Cow position:
               
chr18:50031099-50030779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
64, 73
               

               
Conread position:
               
1088-1404
               

               
Cow position:
               
chr18:52446913-52447229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
70, 63
               

               
Conread position:
               
1096-1367
               

               
Cow position:
               
chr18:56248176-56247907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1096-1401
               

               
Cow position:
               
chr18:49021632-49021937 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
27, 41
               

               
Conread position:
               
1096-1458
               

               
Cow position:
               
chr18:1417815-1418177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
36, 30
               

               
Conread position:
               
1096-1458
               

               
Cow position:
               
chr18:42837955-42837592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
354, 0
               

               
Conread position:
               
1097-1401
               

               
Cow position:
               
chr18:50271443-50271747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
141, 157
               

               
Conread position:
               
1097-1402
               

               
Cow position:
               
chr18:56330205-56329900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
39, 43
               

               
Conread position:
               
1097-1465
               

               
Cow position:
               
chr18:50059725-50059354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
121, 117
               

               
Conread position:
               
1098-1409
               

               
Cow position:
               
chr18:44239740-44240051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1098-1409
               

               
Cow position:
               
chr18:52427532-52427843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
8e-29
               

               
Alignm gaps (pig, cow):
               
159, 147
               

               
Conread position:
               
1098-1409
               

               
Cow position:
               
chr18:52432881-52433192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
49, 56
               

               
Conread position:
               
1098-1435
               

               
Cow position:
               
chr18:14454037-14453700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
237, 228
               

               
Conread position:
               
1098-1457
               

               
Cow position:
               
chr18:42985577-42985217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-38
               

               
Alignm gaps (pig, cow):
               
239, 230
               

               
Conread position:
               
1099-1409
               

               
Cow position:
               
chr18:44154470-44154157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
1101-1409
               

               
Cow position:
               
chr18:53587098-53586789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
7, 154
               

               
Conread position:
               
1102-1448
               

               
Cow position:
               
chr18:43048741-43048395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1107-1452
               

               
Cow position:
               
chr18:55067118-55066772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
73, 55
               

               
Conread position:
               
1109-1406
               

               
Cow position:
               
chr18:14453294-14452997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1119-1458
               

               
Cow position:
               
chr18:44398435-44398095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
331, 0
               

               
Conread position:
               
1128-1408
               

               
Cow position:
               
chr18:55523321-55523601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
36, 46
               

               
Conread position:
               
1133-1413
               

               
Cow position:
               
chr18:40306187-40306467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
127, 120
               

               
Conread position:
               
1142-1458
               

               
Cow position:
               
chr18:41197518-41197835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
101, 110
               

               
Conread position:
               
1163-1406
               

               
Cow position:
               
chr18:43023107-43022864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1163-1458
               

               
Cow position:
               
chr18:44184922-44184626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
287, 0
               

               
Conread position:
               
1165-1398
               

               
Cow position:
               
chr18:44154488-44154252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
104, 177
               

               
Conread position:
               
1172-1441
               

               
Cow position:
               
chr18:50271434-50271703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
159, 168
               

               
Conread position:
               
1180-1406
               

               
Cow position:
               
chr18:56248176-56247952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
1180-1454
               

               
Cow position:
               
chr18:51970321-51970594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
136, 68
               

               
Conread position:
               
1180-1462
               

               
Cow position:
               
chr18:42790945-42791228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
270, 0
               

               
Conread position:
               
1185-1458
               

               
Cow position:
               
chr18:44398453-44398179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
142, 151
               

               
Conread position:
               
1186-1462
               

               
Cow position:
               
chr18:52446927-52447203 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
1187-1463
               

               
Cow position:
               
chr18:51873689-51873965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
263, 18
               

               
Conread position:
               
1189-1459
               

               
Cow position:
               
chr18:42744727-42744457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
216, 231
               

               
Conread position:
               
1208-1458
               

               
Cow position:
               
chr18:41197501-41197751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
242, 5
               
Show alignments to all cow chromosomes.