Cow genome map
| Conread name: | Ss1.1-mA2-MI-P-A2-aaq-h-12-1-UM.s1.3.5 |
| Conread position: | 838-1402 |
| Cow position: | chr6:49340380-49340940 (view UCSC Genome Browser custom track) |
| Alignm length: | 568 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 489, 19 |
| Conread position: | 864-1401 |
| Cow position: | chr6:49340571-49341107 (view UCSC Genome Browser custom track) |
| Alignm length: | 541 |
| Alignm identity: | 355 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 130, 17 |
| Conread position: | 864-1408 |
| Cow position: | chr6:49396460-49397003 (view UCSC Genome Browser custom track) |
| Alignm length: | 547 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 16 |
| Conread position: | 865-1401 |
| Cow position: | chr6:49428816-49429351 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 881-1402 |
| Cow position: | chr6:49340755-49341276 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 124, 103 |
| Conread position: | 881-1406 |
| Cow position: | chr6:49340923-49341447 (view UCSC Genome Browser custom track) |
| Alignm length: | 528 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 362, 375 |
| Conread position: | 881-1406 |
| Cow position: | chr6:49396392-49396917 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 216, 211 |
| Conread position: | 881-1458 |
| Cow position: | chr6:49340503-49341081 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 375 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 569, 0 |
| Conread position: | 881-1458 |
| Cow position: | chr6:49340671-49341249 (view UCSC Genome Browser custom track) |
| Alignm length: | 581 |
| Alignm identity: | 353 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 446, 451 |
| Conread position: | 881-1458 |
| Cow position: | chr6:49396308-49396886 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 353 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 569, 0 |
| Conread position: | 881-1459 |
| Cow position: | chr6:49340839-49341417 (view UCSC Genome Browser custom track) |
| Alignm length: | 579 |
| Alignm identity: | 368 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 887-1325 |
| Cow position: | chr6:49428333-49428771 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 271 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 204, 211 |
| Conread position: | 887-1370 |
| Cow position: | chr6:49429005-49429488 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 292 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 127, 120 |
| Conread position: | 887-1401 |
| Cow position: | chr6:49428753-49429267 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 311 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 22, 33 |
| Conread position: | 887-1406 |
| Cow position: | chr6:49395984-49396497 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 322 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 28, 15 |
| Conread position: | 890-1387 |
| Cow position: | chr6:49396155-49396646 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 313 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 284, 75 |
| Conread position: | 890-1401 |
| Cow position: | chr6:49428420-49428931 (view UCSC Genome Browser custom track) |
| Alignm length: | 516 |
| Alignm identity: | 315 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 124, 117 |
| Conread position: | 890-1458 |
| Cow position: | chr6:49396233-49396802 (view UCSC Genome Browser custom track) |
| Alignm length: | 573 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 181 |
| Conread position: | 891-1235 |
| Cow position: | chr6:49429091-49429437 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 7, 119 |
| Conread position: | 892-1406 |
| Cow position: | chr6:49395905-49396414 (view UCSC Genome Browser custom track) |
| Alignm length: | 518 |
| Alignm identity: | 325 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 87, 95 |
| Conread position: | 907-1414 |
| Cow position: | chr6:49340361-49340868 (view UCSC Genome Browser custom track) |
| Alignm length: | 511 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 420, 448 |
| Conread position: | 920-1122 |
| Cow position: | chr6:49429290-49429492 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 91, 84 |
| Conread position: | 938-1397 |
| Cow position: | chr6:49362327-49362774 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 289 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 74, 63 |
Show alignments to all cow chromosomes.