Cow genome map
Conread name: | Ss1.1-mA2-MI-P-A2-aey-a-01-1-UM.s1.3 |
Conread position: | 430-637 |
Cow position: | chr12:23734324-23734527 (view UCSC Genome Browser custom track) |
Alignm length: | 210 |
Alignm identity: | 151 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 90, 138 |
Conread position: | 431-639 |
Cow position: | chr12:25933621-25933832 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 166 |
Alignm E-value: | 7e-40 |
Alignm gaps (pig, cow): | 26, 152 |
Conread position: | 439-629 |
Cow position: | chr12:14855763-14855952 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 144 |
Alignm E-value: | 8e-31 |
Alignm gaps (pig, cow): | 119, 41 |
Conread position: | 442-609 |
Cow position: | chr12:27038791-27038623 (view UCSC Genome Browser custom track) |
Alignm length: | 170 |
Alignm identity: | 125 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 25, 56 |
Conread position: | 449-634 |
Cow position: | chr12:10846688-10846513 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 142 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 111, 7 |
Conread position: | 452-610 |
Cow position: | chr12:31528893-31528735 (view UCSC Genome Browser custom track) |
Alignm length: | 160 |
Alignm identity: | 124 |
Alignm E-value: | 8e-31 |
Alignm gaps (pig, cow): | 106, 5 |
Conread position: | 452-630 |
Cow position: | chr12:47486794-47486974 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 132 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 72, 0 |
Conread position: | 452-635 |
Cow position: | chr12:27055568-27055748 (view UCSC Genome Browser custom track) |
Alignm length: | 186 |
Alignm identity: | 153 |
Alignm E-value: | 9.00054e-42 |
Alignm gaps (pig, cow): | 67, 29 |
Conread position: | 453-630 |
Cow position: | chr12:1030942-1031123 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 133 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 69, 46 |
Conread position: | 455-601 |
Cow position: | chr12:13657779-13657632 (view UCSC Genome Browser custom track) |
Alignm length: | 148 |
Alignm identity: | 120 |
Alignm E-value: | 1e-33 |
Alignm gaps (pig, cow): | 103, 0 |
Conread position: | 455-605 |
Cow position: | chr12:45541676-45541823 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 116 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 103, 25 |
Conread position: | 455-611 |
Cow position: | chr12:17262820-17262970 (view UCSC Genome Browser custom track) |
Alignm length: | 158 |
Alignm identity: | 117 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 103, 25 |
Conread position: | 455-616 |
Cow position: | chr12:32413478-32413644 (view UCSC Genome Browser custom track) |
Alignm length: | 167 |
Alignm identity: | 136 |
Alignm E-value: | 5e-37 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 455-623 |
Cow position: | chr12:14325302-14325141 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 123 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 455-623 |
Cow position: | chr12:31257984-31258140 (view UCSC Genome Browser custom track) |
Alignm length: | 169 |
Alignm identity: | 128 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 455-626 |
Cow position: | chr12:16543617-16543442 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 134 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 50, 157 |
Conread position: | 455-626 |
Cow position: | chr12:30596431-30596605 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 140 |
Alignm E-value: | 6e-38 |
Alignm gaps (pig, cow): | 46, 0 |
Conread position: | 455-628 |
Cow position: | chr12:18093858-18094028 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 131 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 97, 21 |
Conread position: | 455-628 |
Cow position: | chr12:40716076-40715910 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 124 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 455-628 |
Cow position: | chr12:41642396-41642570 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 129 |
Alignm E-value: | 5e-27 |
Alignm gaps (pig, cow): | 28, 81 |
Conread position: | 455-628 |
Cow position: | chr12:48425679-48425848 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 133 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 48, 25 |
Conread position: | 455-630 |
Cow position: | chr12:44057484-44057657 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 135 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 104, 21 |
Conread position: | 455-631 |
Cow position: | chr12:34242361-34242184 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 134 |
Alignm E-value: | 1e-32 |
Alignm gaps (pig, cow): | 104, 0 |
Conread position: | 455-632 |
Cow position: | chr12:3816449-3816629 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 132 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 455-632 |
Cow position: | chr12:5497857-5497687 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 135 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 455-632 |
Cow position: | chr12:16205692-16205867 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 132 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 102, 24 |
Conread position: | 455-632 |
Cow position: | chr12:25312404-25312233 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 132 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 104, 30 |
Conread position: | 455-632 |
Cow position: | chr12:30064904-30065075 (view UCSC Genome Browser custom track) |
Alignm length: | 179 |
Alignm identity: | 135 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 158, 25 |
Conread position: | 455-634 |
Cow position: | chr12:43671672-43671846 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 139 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 104, 17 |
Conread position: | 455-635 |
Cow position: | chr12:34849886-34849714 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 142 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 104, 32 |
Conread position: | 455-635 |
Cow position: | chr12:34852523-34852351 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 141 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 104, 32 |
Conread position: | 455-635 |
Cow position: | chr12:45226024-45225844 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 134 |
Alignm E-value: | 7e-30 |
Alignm gaps (pig, cow): | 130, 58 |
Conread position: | 455-637 |
Cow position: | chr12:7996377-7996558 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 144 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 62, 31 |
Conread position: | 455-637 |
Cow position: | chr12:18769106-18768925 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 143 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 14, 44 |
Conread position: | 455-640 |
Cow position: | chr12:5658782-5658595 (view UCSC Genome Browser custom track) |
Alignm length: | 190 |
Alignm identity: | 142 |
Alignm E-value: | 8e-31 |
Alignm gaps (pig, cow): | 22, 51 |
Conread position: | 455-645 |
Cow position: | chr12:18966789-18966602 (view UCSC Genome Browser custom track) |
Alignm length: | 192 |
Alignm identity: | 135 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 101, 21 |
Conread position: | 455-645 |
Cow position: | chr12:29448611-29448799 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 152 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 39, 21 |
Conread position: | 455-648 |
Cow position: | chr12:4582910-4583100 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 144 |
Alignm E-value: | 9e-32 |
Alignm gaps (pig, cow): | 103, 140 |
Conread position: | 455-648 |
Cow position: | chr12:5797592-5797411 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 143 |
Alignm E-value: | 5e-26 |
Alignm gaps (pig, cow): | 25, 0 |
Conread position: | 456-632 |
Cow position: | chr12:7645839-7645668 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 133 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 102, 24 |
Conread position: | 456-632 |
Cow position: | chr12:10763222-10763407 (view UCSC Genome Browser custom track) |
Alignm length: | 187 |
Alignm identity: | 134 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 63, 86 |
Conread position: | 456-635 |
Cow position: | chr12:24559323-24559504 (view UCSC Genome Browser custom track) |
Alignm length: | 182 |
Alignm identity: | 139 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 58, 0 |
Conread position: | 456-635 |
Cow position: | chr12:42477977-42478155 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 135 |
Alignm E-value: | 8e-31 |
Alignm gaps (pig, cow): | 64, 12 |
Conread position: | 456-636 |
Cow position: | chr12:47804122-47804300 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 127 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 114, 0 |
Conread position: | 456-637 |
Cow position: | chr12:17109924-17109749 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 137 |
Alignm E-value: | 6e-28 |
Alignm gaps (pig, cow): | 103, 24 |
Conread position: | 456-637 |
Cow position: | chr12:42918441-42918611 (view UCSC Genome Browser custom track) |
Alignm length: | 183 |
Alignm identity: | 143 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 103, 25 |
Conread position: | 456-638 |
Cow position: | chr12:5680648-5680832 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 140 |
Alignm E-value: | 4e-34 |
Alignm gaps (pig, cow): | 64, 0 |
Conread position: | 456-639 |
Cow position: | chr12:5539000-5538825 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 139 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 103, 74 |
Conread position: | 456-648 |
Cow position: | chr12:33458114-33458298 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 142 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 64, 27 |
Conread position: | 456-648 |
Cow position: | chr12:39781374-39781178 (view UCSC Genome Browser custom track) |
Alignm length: | 198 |
Alignm identity: | 153 |
Alignm E-value: | 2e-37 |
Alignm gaps (pig, cow): | 103, 113 |
Conread position: | 459-636 |
Cow position: | chr12:1504991-1505162 (view UCSC Genome Browser custom track) |
Alignm length: | 178 |
Alignm identity: | 132 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 21, 0 |
Conread position: | 459-639 |
Cow position: | chr12:30210451-30210639 (view UCSC Genome Browser custom track) |
Alignm length: | 189 |
Alignm identity: | 136 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 460-638 |
Cow position: | chr12:44907986-44908164 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 133 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 60, 19 |
Conread position: | 460-646 |
Cow position: | chr12:15984773-15984594 (view UCSC Genome Browser custom track) |
Alignm length: | 188 |
Alignm identity: | 142 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 110, 30 |
Conread position: | 460-648 |
Cow position: | chr12:12331541-12331351 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 144 |
Alignm E-value: | 4e-35 |
Alignm gaps (pig, cow): | 60, 0 |
Conread position: | 461-635 |
Cow position: | chr12:11520147-11520318 (view UCSC Genome Browser custom track) |
Alignm length: | 177 |
Alignm identity: | 134 |
Alignm E-value: | 7e-29 |
Alignm gaps (pig, cow): | 58, 19 |
Conread position: | 462-620 |
Cow position: | chr12:28017013-28017176 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 121 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 20, 0 |
Conread position: | 462-635 |
Cow position: | chr12:16850941-16850770 (view UCSC Genome Browser custom track) |
Alignm length: | 176 |
Alignm identity: | 135 |
Alignm E-value: | 8e-31 |
Alignm gaps (pig, cow): | 57, 13 |
Conread position: | 462-644 |
Cow position: | chr12:40931641-40931460 (view UCSC Genome Browser custom track) |
Alignm length: | 184 |
Alignm identity: | 135 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 160, 57 |
Conread position: | 466-619 |
Cow position: | chr12:27365903-27366055 (view UCSC Genome Browser custom track) |
Alignm length: | 156 |
Alignm identity: | 119 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 54, 73 |
Conread position: | 469-642 |
Cow position: | chr12:11081121-11080947 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 142 |
Alignm E-value: | 9.00054e-42 |
Alignm gaps (pig, cow): | 91, 0 |
Conread position: | 469-647 |
Cow position: | chr12:34466026-34465844 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 133 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 50, 170 |
Conread position: | 470-631 |
Cow position: | chr12:25606684-25606848 (view UCSC Genome Browser custom track) |
Alignm length: | 165 |
Alignm identity: | 124 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 473-636 |
Cow position: | chr12:749343-749504 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 121 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 49, 67 |
Conread position: | 473-637 |
Cow position: | chr12:7274717-7274557 (view UCSC Genome Browser custom track) |
Alignm length: | 166 |
Alignm identity: | 127 |
Alignm E-value: | 2e-27 |
Alignm gaps (pig, cow): | 156, 85 |
Conread position: | 474-629 |
Cow position: | chr12:3615980-3616141 (view UCSC Genome Browser custom track) |
Alignm length: | 162 |
Alignm identity: | 119 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 474-637 |
Cow position: | chr12:9229517-9229350 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 125 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 45, 0 |
Conread position: | 475-647 |
Cow position: | chr12:34090113-34090279 (view UCSC Genome Browser custom track) |
Alignm length: | 175 |
Alignm identity: | 136 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 72, 22 |
Conread position: | 476-647 |
Cow position: | chr12:36109277-36109104 (view UCSC Genome Browser custom track) |
Alignm length: | 174 |
Alignm identity: | 130 |
Alignm E-value: | 7e-30 |
Alignm gaps (pig, cow): | 81, 0 |
Conread position: | 477-621 |
Cow position: | chr12:8981067-8980923 (view UCSC Genome Browser custom track) |
Alignm length: | 147 |
Alignm identity: | 113 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 42, 123 |
Conread position: | 480-640 |
Cow position: | chr12:4801355-4801521 (view UCSC Genome Browser custom track) |
Alignm length: | 168 |
Alignm identity: | 124 |
Alignm E-value: | 1e-22 |
Alignm gaps (pig, cow): | 39, 161 |
Conread position: | 481-625 |
Cow position: | chr12:21829064-21829206 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 112 |
Alignm E-value: | 1e-24 |
Alignm gaps (pig, cow): | 77, 16 |
Conread position: | 481-629 |
Cow position: | chr12:24529393-24529247 (view UCSC Genome Browser custom track) |
Alignm length: | 151 |
Alignm identity: | 115 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 52, 61 |
Conread position: | 481-630 |
Cow position: | chr12:1223354-1223208 (view UCSC Genome Browser custom track) |
Alignm length: | 150 |
Alignm identity: | 113 |
Alignm E-value: | 4e-24 |
Alignm gaps (pig, cow): | 111, 0 |
Conread position: | 492-620 |
Cow position: | chr12:44391611-44391739 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 99 |
Alignm E-value: | 1e-23 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 492-646 |
Cow position: | chr12:22689737-22689889 (view UCSC Genome Browser custom track) |
Alignm length: | 157 |
Alignm identity: | 116 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 5, 45 |
Conread position: | 496-647 |
Cow position: | chr12:24681824-24681976 (view UCSC Genome Browser custom track) |
Alignm length: | 153 |
Alignm identity: | 125 |
Alignm E-value: | 5e-36 |
Alignm gaps (pig, cow): | 22, 0 |
Conread position: | 497-640 |
Cow position: | chr12:15066828-15066973 (view UCSC Genome Browser custom track) |
Alignm length: | 146 |
Alignm identity: | 111 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 31, 0 |
Conread position: | 504-638 |
Cow position: | chr12:5899524-5899656 (view UCSC Genome Browser custom track) |
Alignm length: | 137 |
Alignm identity: | 105 |
Alignm E-value: | 9e-21 |
Alignm gaps (pig, cow): | 14, 50 |
Conread position: | 509-648 |
Cow position: | chr12:9780252-9780116 (view UCSC Genome Browser custom track) |
Alignm length: | 142 |
Alignm identity: | 109 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 50, 89 |
Conread position: | 515-646 |
Cow position: | chr12:38096147-38096279 (view UCSC Genome Browser custom track) |
Alignm length: | 134 |
Alignm identity: | 112 |
Alignm E-value: | 8e-31 |
Alignm gaps (pig, cow): | 20, 121 |
Conread position: | 516-648 |
Cow position: | chr12:11499784-11499913 (view UCSC Genome Browser custom track) |
Alignm length: | 133 |
Alignm identity: | 101 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 51, 0 |
Conread position: | 523-637 |
Cow position: | chr12:35799264-35799380 (view UCSC Genome Browser custom track) |
Alignm length: | 117 |
Alignm identity: | 98 |
Alignm E-value: | 2e-26 |
Alignm gaps (pig, cow): | 36, 0 |
Conread position: | 526-636 |
Cow position: | chr12:38592757-38592868 (view UCSC Genome Browser custom track) |
Alignm length: | 112 |
Alignm identity: | 89 |
Alignm E-value: | 3e-21 |
Alignm gaps (pig, cow): | 33, 0 |
Conread position: | 532-635 |
Cow position: | chr12:593297-593194 (view UCSC Genome Browser custom track) |
Alignm length: | 105 |
Alignm identity: | 87 |
Alignm E-value: | 1e-21 |
Alignm gaps (pig, cow): | 27, 10 |
Show alignments to all cow chromosomes.