Cow genome map

Conread name: Ss1.1-mA2-MI-P-A2-aey-a-01-1-UM.s1.3

Conread position: 431-597
Cow position: chr14:5400651-5400481 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 431-646
Cow position: chr14:13810004-13809782 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 157
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 89, 111

Conread position: 433-648
Cow position: chr14:9065952-9065739 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 161
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 85, 15

Conread position: 445-632
Cow position: chr14:36080868-36081053 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 151
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 5, 36

Conread position: 452-616
Cow position: chr14:20045592-20045429 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 132
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 107, 7

Conread position: 453-612
Cow position: chr14:21084382-21084220 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 105, 0

Conread position: 453-639
Cow position: chr14:2189674-2189490 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 148
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 106, 88

Conread position: 453-639
Cow position: chr14:26108674-26108489 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 151
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 106, 129

Conread position: 455-571
Cow position: chr14:31399631-31399518 (view UCSC Genome Browser custom track)
Alignm length: 118
Alignm identity: 94
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 101, 25

Conread position: 455-620
Cow position: chr14:7582414-7582569 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 455-621
Cow position: chr14:47551238-47551401 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 104, 84

Conread position: 455-623
Cow position: chr14:12559442-12559606 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 101, 82

Conread position: 455-630
Cow position: chr14:14182384-14182196 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 142
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 67, 0

Conread position: 455-631
Cow position: chr14:18979162-18979330 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 139
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 104, 42

Conread position: 455-632
Cow position: chr14:21691236-21691414 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 143
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 64, 80

Conread position: 455-632
Cow position: chr14:47974019-47973848 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 104, 25

Conread position: 455-635
Cow position: chr14:27060491-27060322 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 25, 0

Conread position: 455-636
Cow position: chr14:6441948-6441765 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 144
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 64, 0

Conread position: 455-636
Cow position: chr14:19022859-19023039 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 147
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 104, 124

Conread position: 455-637
Cow position: chr14:20865281-20865452 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 154, 25

Conread position: 455-637
Cow position: chr14:26153230-26153412 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 147
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 15, 34

Conread position: 455-637
Cow position: chr14:37624734-37624913 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 104, 25

Conread position: 455-638
Cow position: chr14:26493913-26493728 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 143
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 59, 123

Conread position: 455-638
Cow position: chr14:47519713-47519896 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 146
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 103, 87

Conread position: 455-639
Cow position: chr14:7647979-7648166 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 151
Alignm E-value: 3.00018e-42
Alignm gaps (pig, cow): 64, 0

Conread position: 455-639
Cow position: chr14:10692229-10692405 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 141
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 104, 132

Conread position: 455-639
Cow position: chr14:23107363-23107173 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 151
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 62, 162

Conread position: 455-640
Cow position: chr14:20429620-20429429 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 136
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 103, 186

Conread position: 455-640
Cow position: chr14:28605272-28605086 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 142
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 103, 0

Conread position: 455-641
Cow position: chr14:6583036-6582848 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 103, 25

Conread position: 455-643
Cow position: chr14:26960380-26960563 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 99, 30

Conread position: 455-643
Cow position: chr14:27104118-27103937 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 138
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 104, 29

Conread position: 455-644
Cow position: chr14:23008217-23008039 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 137
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 30, 0

Conread position: 455-644
Cow position: chr14:47138752-47138936 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 137
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 104, 25

Conread position: 455-645
Cow position: chr14:15990255-15990075 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 65, 25

Conread position: 455-647
Cow position: chr14:28565509-28565323 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 141
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 102, 25

Conread position: 456-580
Cow position: chr14:20435430-20435305 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 103, 0

Conread position: 456-621
Cow position: chr14:47027333-47027499 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 65, 51

Conread position: 456-632
Cow position: chr14:25385848-25386024 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 64, 43

Conread position: 456-632
Cow position: chr14:37678965-37679141 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 144
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 103, 119

Conread position: 456-635
Cow position: chr14:44084450-44084636 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 130
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 63, 0

Conread position: 456-642
Cow position: chr14:41531626-41531810 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 146
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 64, 86

Conread position: 456-647
Cow position: chr14:16207459-16207663 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 458-631
Cow position: chr14:21369400-21369231 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 100, 22

Conread position: 458-632
Cow position: chr14:20795809-20795639 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 143
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 139, 0

Conread position: 458-645
Cow position: chr14:6984929-6985104 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 139
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 100, 22

Conread position: 458-648
Cow position: chr14:47604263-47604448 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 101, 140

Conread position: 458-648
Cow position: chr14:47693731-47693543 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 101, 26

Conread position: 459-616
Cow position: chr14:10935674-10935827 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 97, 21

Conread position: 459-628
Cow position: chr14:11615185-11615356 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 61, 0

Conread position: 459-636
Cow position: chr14:43031832-43031654 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 140
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 100, 0

Conread position: 459-646
Cow position: chr14:44861201-44861385 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 149
Alignm E-value: 5e-37
Alignm gaps (pig, cow): 100, 75

Conread position: 459-648
Cow position: chr14:48213116-48212929 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 135
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 137, 55

Conread position: 460-621
Cow position: chr14:25639737-25639898 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 59, 82

Conread position: 460-638
Cow position: chr14:44032070-44031890 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 138
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 54, 0

Conread position: 460-640
Cow position: chr14:23050585-23050758 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 60, 81

Conread position: 460-647
Cow position: chr14:39058615-39058423 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 152
Alignm E-value: 4e-34
Alignm gaps (pig, cow): 64, 145

Conread position: 462-577
Cow position: chr14:28327091-28327206 (view UCSC Genome Browser custom track)
Alignm length: 116
Alignm identity: 90
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 463-640
Cow position: chr14:38355220-38355044 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 138
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 56, 118

Conread position: 463-646
Cow position: chr14:28565331-28565155 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 79

Conread position: 466-628
Cow position: chr14:48399537-48399370 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 121
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 53, 0

Conread position: 466-630
Cow position: chr14:37333726-37333564 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 127
Alignm E-value: 7e-29
Alignm gaps (pig, cow): 136, 7

Conread position: 466-631
Cow position: chr14:26805022-26805189 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 132
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 54, 0

Conread position: 466-638
Cow position: chr14:1868770-1868951 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 54, 141

Conread position: 473-637
Cow position: chr14:47600388-47600549 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 86, 38

Conread position: 474-601
Cow position: chr14:8875028-8875156 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 99
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 476-648
Cow position: chr14:29481366-29481539 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 72, 15

Conread position: 478-618
Cow position: chr14:20284171-20284029 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 117
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 27, 0

Conread position: 480-630
Cow position: chr14:16969080-16969228 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 109
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 480-631
Cow position: chr14:11582074-11581928 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 79, 99

Conread position: 480-631
Cow position: chr14:43565864-43566016 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 78, 0

Conread position: 481-605
Cow position: chr14:10936295-10936171 (view UCSC Genome Browser custom track)
Alignm length: 127
Alignm identity: 100
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 49, 106

Conread position: 481-628
Cow position: chr14:45849202-45849352 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 121
Alignm E-value: 3e-31
Alignm gaps (pig, cow): 39, 0

Conread position: 481-632
Cow position: chr14:35700442-35700290 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 125
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 78, 0

Conread position: 481-635
Cow position: chr14:20701802-20701958 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 33, 0

Conread position: 481-648
Cow position: chr14:13928109-13928277 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 4e-23
Alignm gaps (pig, cow): 63, 58

Conread position: 483-627
Cow position: chr14:8517977-8518116 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 94, 0

Conread position: 483-637
Cow position: chr14:46114140-46114301 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 5, 0

Conread position: 484-635
Cow position: chr14:5677370-5677221 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 75, 53

Conread position: 484-638
Cow position: chr14:24838375-24838532 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 113
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 487-634
Cow position: chr14:22473230-22473377 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 33, 46

Conread position: 489-640
Cow position: chr14:10906732-10906585 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 122
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 11, 0

Conread position: 497-626
Cow position: chr14:38688238-38688365 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 110
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 62, 12

Conread position: 499-647
Cow position: chr14:43314978-43314829 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 60, 20

Conread position: 508-637
Cow position: chr14:7282134-7282004 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 98
Alignm E-value: 9e-21
Alignm gaps (pig, cow): 51, 0

Conread position: 512-636
Cow position: chr14:9692962-9693089 (view UCSC Genome Browser custom track)
Alignm length: 130
Alignm identity: 103
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 10, 21

Conread position: 514-632
Cow position: chr14:7614042-7613924 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 100
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 515-636
Cow position: chr14:30790385-30790506 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 99
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 44, 37

Show alignments to all cow chromosomes.