Cow genome map
| Conread name: | Ss1.1-mA2-MI-P-A2-aey-a-01-1-UM.s1.3 |
| Conread position: | 442-632 |
| Cow position: | chr26:12569828-12569642 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 55, 9 |
| Conread position: | 449-639 |
| Cow position: | chr26:3186561-3186751 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 71, 7 |
| Conread position: | 452-604 |
| Cow position: | chr26:3019398-3019248 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 106, 24 |
| Conread position: | 452-638 |
| Cow position: | chr26:31466699-31466878 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 107, 5 |
| Conread position: | 453-628 |
| Cow position: | chr26:9632351-9632171 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 15, 149 |
| Conread position: | 453-635 |
| Cow position: | chr26:29244419-29244595 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 77, 27 |
| Conread position: | 453-647 |
| Cow position: | chr26:11567951-11567766 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 106, 27 |
| Conread position: | 455-616 |
| Cow position: | chr26:30605338-30605189 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 104, 39 |
| Conread position: | 455-618 |
| Cow position: | chr26:18719277-18719437 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 103, 25 |
| Conread position: | 455-622 |
| Cow position: | chr26:19768787-19768616 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 455-628 |
| Cow position: | chr26:10523427-10523260 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 455-628 |
| Cow position: | chr26:14080726-14080896 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 136 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 103, 73 |
| Conread position: | 455-628 |
| Cow position: | chr26:16604306-16604485 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 149 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 455-628 |
| Cow position: | chr26:19110932-19111105 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 21, 113 |
| Conread position: | 455-631 |
| Cow position: | chr26:3756246-3756412 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 455-631 |
| Cow position: | chr26:27585796-27585968 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 103, 5 |
| Conread position: | 455-632 |
| Cow position: | chr26:10137721-10137545 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 145 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 104, 93 |
| Conread position: | 455-632 |
| Cow position: | chr26:12216876-12217042 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 455-632 |
| Cow position: | chr26:12669219-12669395 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 455-632 |
| Cow position: | chr26:24183023-24182856 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 104, 24 |
| Conread position: | 455-636 |
| Cow position: | chr26:2196572-2196389 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 65, 20 |
| Conread position: | 455-637 |
| Cow position: | chr26:2769819-2769640 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 98, 25 |
| Conread position: | 455-637 |
| Cow position: | chr26:9102090-9101910 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 65, 87 |
| Conread position: | 455-639 |
| Cow position: | chr26:7955872-7956052 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 104, 73 |
| Conread position: | 455-647 |
| Cow position: | chr26:14924505-14924693 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 119, 25 |
| Conread position: | 456-626 |
| Cow position: | chr26:21859844-21860012 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 64, 117 |
| Conread position: | 456-627 |
| Cow position: | chr26:12579989-12579821 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 103, 6 |
| Conread position: | 456-627 |
| Cow position: | chr26:32865872-32865699 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 54, 41 |
| Conread position: | 456-631 |
| Cow position: | chr26:15211823-15212006 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 456-632 |
| Cow position: | chr26:7961960-7962131 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 63, 24 |
| Conread position: | 456-632 |
| Cow position: | chr26:17204124-17203946 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 142, 0 |
| Conread position: | 456-636 |
| Cow position: | chr26:12520048-12520229 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 148 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 457-621 |
| Cow position: | chr26:7387788-7387948 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 101, 142 |
| Conread position: | 458-635 |
| Cow position: | chr26:6470251-6470075 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 51, 30 |
| Conread position: | 458-647 |
| Cow position: | chr26:32215467-32215659 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 61, 30 |
| Conread position: | 459-635 |
| Cow position: | chr26:10292621-10292794 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 57, 124 |
| Conread position: | 459-638 |
| Cow position: | chr26:798275-798086 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 459-648 |
| Cow position: | chr26:782907-782721 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 36, 140 |
| Conread position: | 460-619 |
| Cow position: | chr26:8651582-8651426 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 98, 20 |
| Conread position: | 460-646 |
| Cow position: | chr26:9064365-9064546 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 59, 99 |
| Conread position: | 461-635 |
| Cow position: | chr26:14505870-14505702 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 130 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 98, 59 |
| Conread position: | 463-604 |
| Cow position: | chr26:19935330-19935192 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 109 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 95, 17 |
| Conread position: | 463-621 |
| Cow position: | chr26:7162384-7162225 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 57, 90 |
| Conread position: | 464-630 |
| Cow position: | chr26:21578072-21577905 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 466-643 |
| Cow position: | chr26:13018359-13018176 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 469-628 |
| Cow position: | chr26:12652211-12652051 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 90, 114 |
| Conread position: | 474-637 |
| Cow position: | chr26:10292814-10292980 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 145, 47 |
| Conread position: | 476-639 |
| Cow position: | chr26:19332963-19332802 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 100, 32 |
| Conread position: | 481-632 |
| Cow position: | chr26:6299469-6299616 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 89, 23 |
| Conread position: | 481-635 |
| Cow position: | chr26:24493362-24493516 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 78, 109 |
| Conread position: | 481-637 |
| Cow position: | chr26:9666367-9666214 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 122 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 77, 40 |
| Conread position: | 497-637 |
| Cow position: | chr26:19649051-19649187 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 22, 30 |
| Conread position: | 498-648 |
| Cow position: | chr26:25241689-25241840 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 499-639 |
| Cow position: | chr26:12752489-12752627 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 108 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 123, 45 |
| Conread position: | 503-643 |
| Cow position: | chr26:2623214-2623077 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 111 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 11, 96 |
| Conread position: | 514-632 |
| Cow position: | chr26:32658932-32658813 (view UCSC Genome Browser custom track) |
| Alignm length: | 120 |
| Alignm identity: | 96 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 45, 0 |
Show alignments to all cow chromosomes.