Cow genome map
| Conread name: | Ss1.1-mA2-MI-P-A2-aey-a-01-1-UM.s1.3 |
| Conread position: | 435-616 |
| Cow position: | chr3:74701379-74701205 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 124, 14 |
| Conread position: | 435-644 |
| Cow position: | chr3:24300319-24300534 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 435-648 |
| Cow position: | chr3:26493273-26493063 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 14, 124 |
| Conread position: | 442-648 |
| Cow position: | chr3:54126289-54126089 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 11, 63 |
| Conread position: | 449-590 |
| Cow position: | chr3:58285930-58285794 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 109, 8 |
| Conread position: | 451-638 |
| Cow position: | chr3:75142602-75142426 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 143 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 108, 47 |
| Conread position: | 452-597 |
| Cow position: | chr3:8457630-8457776 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 452-632 |
| Cow position: | chr3:49132087-49131905 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 61, 5 |
| Conread position: | 452-635 |
| Cow position: | chr3:53588407-53588229 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 144 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 452-636 |
| Cow position: | chr3:17634066-17633886 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 104, 7 |
| Conread position: | 452-648 |
| Cow position: | chr3:9629864-9630054 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 107, 32 |
| Conread position: | 452-648 |
| Cow position: | chr3:58130972-58131162 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 107, 5 |
| Conread position: | 453-632 |
| Cow position: | chr3:12255457-12255628 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 105, 49 |
| Conread position: | 453-635 |
| Cow position: | chr3:51492761-51492943 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 106, 86 |
| Conread position: | 453-644 |
| Cow position: | chr3:63147174-63146989 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 66, 86 |
| Conread position: | 453-645 |
| Cow position: | chr3:64280955-64280750 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 453-648 |
| Cow position: | chr3:32610240-32610437 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 66, 35 |
| Conread position: | 455-554 |
| Cow position: | chr3:15684943-15684844 (view UCSC Genome Browser custom track) |
| Alignm length: | 100 |
| Alignm identity: | 84 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 455-590 |
| Cow position: | chr3:37452051-37452179 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 106 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 455-598 |
| Cow position: | chr3:66708088-66707947 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 117 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 104, 116 |
| Conread position: | 455-600 |
| Cow position: | chr3:53091469-53091608 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 142, 65 |
| Conread position: | 455-602 |
| Cow position: | chr3:5844902-5845044 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 455-618 |
| Cow position: | chr3:25250886-25251047 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 103, 30 |
| Conread position: | 455-620 |
| Cow position: | chr3:34086076-34085914 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 104, 79 |
| Conread position: | 455-620 |
| Cow position: | chr3:48629611-48629449 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 40, 144 |
| Conread position: | 455-620 |
| Cow position: | chr3:58632545-58632706 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 103, 25 |
| Conread position: | 455-620 |
| Cow position: | chr3:64484227-64484393 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 455-626 |
| Cow position: | chr3:39911076-39910909 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 455-628 |
| Cow position: | chr3:5601188-5601016 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 64, 113 |
| Conread position: | 455-628 |
| Cow position: | chr3:14505936-14505762 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 143 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 455-628 |
| Cow position: | chr3:20092543-20092373 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 107, 25 |
| Conread position: | 455-628 |
| Cow position: | chr3:59608481-59608649 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 134 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 104, 124 |
| Conread position: | 455-628 |
| Cow position: | chr3:74205826-74205656 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 129 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 115, 16 |
| Conread position: | 455-629 |
| Cow position: | chr3:31933117-31932952 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 103, 25 |
| Conread position: | 455-631 |
| Cow position: | chr3:28238594-28238429 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 65, 113 |
| Conread position: | 455-631 |
| Cow position: | chr3:54340443-54340267 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 144 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 104, 117 |
| Conread position: | 455-631 |
| Cow position: | chr3:55991886-55991714 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 62, 25 |
| Conread position: | 455-632 |
| Cow position: | chr3:18214161-18213982 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 14, 148 |
| Conread position: | 455-632 |
| Cow position: | chr3:22271472-22271300 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 100, 25 |
| Conread position: | 455-632 |
| Cow position: | chr3:22953900-22953729 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 142 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 101, 29 |
| Conread position: | 455-632 |
| Cow position: | chr3:23111534-23111358 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 103, 144 |
| Conread position: | 455-632 |
| Cow position: | chr3:58291910-58291736 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 104, 25 |
| Conread position: | 455-632 |
| Cow position: | chr3:58448081-58447911 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 104, 24 |
| Conread position: | 455-632 |
| Cow position: | chr3:73436462-73436284 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 455-635 |
| Cow position: | chr3:5419881-5419709 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 103, 25 |
| Conread position: | 455-635 |
| Cow position: | chr3:8752766-8752944 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 101, 87 |
| Conread position: | 455-635 |
| Cow position: | chr3:23091997-23091819 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 103, 86 |
| Conread position: | 455-635 |
| Cow position: | chr3:77225097-77225271 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 104, 59 |
| Conread position: | 455-636 |
| Cow position: | chr3:70354254-70354077 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 104, 10 |
| Conread position: | 455-637 |
| Cow position: | chr3:891247-891424 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 103, 25 |
| Conread position: | 455-637 |
| Cow position: | chr3:15221539-15221357 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 149 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 104, 162 |
| Conread position: | 455-637 |
| Cow position: | chr3:20471386-20471206 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 143 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 104, 124 |
| Conread position: | 455-637 |
| Cow position: | chr3:25076188-25076005 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 149 |
| Alignm E-value: | 6.02558e-44 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 455-637 |
| Cow position: | chr3:37186805-37186988 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 455-637 |
| Cow position: | chr3:41550396-41550214 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 156 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 86 |
| Conread position: | 455-637 |
| Cow position: | chr3:54881745-54881936 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 141 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 455-637 |
| Cow position: | chr3:65771353-65771175 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 455-639 |
| Cow position: | chr3:27532675-27532498 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 103, 12 |
| Conread position: | 455-640 |
| Cow position: | chr3:26089022-26088832 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 455-641 |
| Cow position: | chr3:68342270-68342094 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 165, 52 |
| Conread position: | 455-646 |
| Cow position: | chr3:24538855-24539045 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 102, 25 |
| Conread position: | 455-646 |
| Cow position: | chr3:58174887-58175070 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 115, 29 |
| Conread position: | 455-647 |
| Cow position: | chr3:3736277-3736471 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 157 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 455-647 |
| Cow position: | chr3:9074367-9074173 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 165 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 455-647 |
| Cow position: | chr3:18216787-18216605 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 104, 69 |
| Conread position: | 455-648 |
| Cow position: | chr3:2198861-2199054 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-34 |
| Alignm gaps (pig, cow): | 103, 180 |
| Conread position: | 455-648 |
| Cow position: | chr3:41718375-41718562 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 104, 20 |
| Conread position: | 455-648 |
| Cow position: | chr3:50281773-50281582 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 55, 7 |
| Conread position: | 455-648 |
| Cow position: | chr3:64536582-64536397 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 456-601 |
| Cow position: | chr3:46094803-46094947 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 103, 32 |
| Conread position: | 456-603 |
| Cow position: | chr3:36204532-36204680 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 456-606 |
| Cow position: | chr3:68262743-68262893 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 42, 112 |
| Conread position: | 456-620 |
| Cow position: | chr3:34675702-34675867 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 456-620 |
| Cow position: | chr3:35278555-35278715 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 103, 30 |
| Conread position: | 456-627 |
| Cow position: | chr3:73741890-73741718 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 62, 41 |
| Conread position: | 456-628 |
| Cow position: | chr3:20993792-20993966 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 456-636 |
| Cow position: | chr3:8924025-8924201 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 102, 24 |
| Conread position: | 456-636 |
| Cow position: | chr3:51781011-51780836 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 165, 85 |
| Conread position: | 456-636 |
| Cow position: | chr3:62884187-62884357 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 132 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 456-637 |
| Cow position: | chr3:3036946-3036761 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 456-637 |
| Cow position: | chr3:60389743-60389933 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 456-637 |
| Cow position: | chr3:61116874-61116692 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 146 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 63, 168 |
| Conread position: | 456-638 |
| Cow position: | chr3:43654130-43653955 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 102, 21 |
| Conread position: | 456-640 |
| Cow position: | chr3:25477785-25477976 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 39, 121 |
| Conread position: | 456-644 |
| Cow position: | chr3:18725665-18725474 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 64, 148 |
| Conread position: | 456-647 |
| Cow position: | chr3:74611547-74611735 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 114, 24 |
| Conread position: | 457-592 |
| Cow position: | chr3:33327689-33327826 (view UCSC Genome Browser custom track) |
| Alignm length: | 138 |
| Alignm identity: | 110 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 457-637 |
| Cow position: | chr3:11920051-11919877 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 142 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 102, 26 |
| Conread position: | 457-641 |
| Cow position: | chr3:48271314-48271492 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 175, 24 |
| Conread position: | 457-645 |
| Cow position: | chr3:30839230-30839412 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 103, 32 |
| Conread position: | 458-591 |
| Cow position: | chr3:51146685-51146556 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 106 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 458-647 |
| Cow position: | chr3:55373584-55373394 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 46, 27 |
| Conread position: | 459-631 |
| Cow position: | chr3:36100821-36100985 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 138 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 100, 21 |
| Conread position: | 459-632 |
| Cow position: | chr3:42480601-42480770 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 459-632 |
| Cow position: | chr3:42584525-42584694 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 55, 38 |
| Conread position: | 459-632 |
| Cow position: | chr3:57830105-57829928 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 139 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 38, 147 |
| Conread position: | 459-632 |
| Cow position: | chr3:61322827-61322993 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 99, 21 |
| Conread position: | 459-635 |
| Cow position: | chr3:6900897-6901074 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 61, 97 |
| Conread position: | 459-639 |
| Cow position: | chr3:4050175-4050361 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 61, 167 |
| Conread position: | 459-643 |
| Cow position: | chr3:24352843-24353027 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 61, 38 |
| Conread position: | 459-646 |
| Cow position: | chr3:909651-909459 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 61, 83 |
| Conread position: | 460-626 |
| Cow position: | chr3:74846726-74846556 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 460-632 |
| Cow position: | chr3:50614624-50614798 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 60, 82 |
| Conread position: | 460-637 |
| Cow position: | chr3:58765092-58764906 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 460-648 |
| Cow position: | chr3:64172423-64172613 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 462-612 |
| Cow position: | chr3:74912839-74912990 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 462-637 |
| Cow position: | chr3:15655161-15654989 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 57, 137 |
| Conread position: | 462-637 |
| Cow position: | chr3:40100732-40100549 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 462-639 |
| Cow position: | chr3:16343597-16343772 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-35 |
| Alignm gaps (pig, cow): | 16, 29 |
| Conread position: | 462-640 |
| Cow position: | chr3:51441559-51441734 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 99, 11 |
| Conread position: | 463-628 |
| Cow position: | chr3:56483505-56483672 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 463-632 |
| Cow position: | chr3:29291675-29291836 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 96, 10 |
| Conread position: | 463-637 |
| Cow position: | chr3:31247654-31247822 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 96, 17 |
| Conread position: | 466-637 |
| Cow position: | chr3:44093379-44093203 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 61, 154 |
| Conread position: | 466-647 |
| Cow position: | chr3:38253071-38253242 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 93, 25 |
| Conread position: | 467-646 |
| Cow position: | chr3:57634248-57634434 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 41, 83 |
| Conread position: | 468-632 |
| Cow position: | chr3:23945115-23945275 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 126 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 76, 24 |
| Conread position: | 469-625 |
| Cow position: | chr3:1004632-1004784 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 50, 38 |
| Conread position: | 469-632 |
| Cow position: | chr3:30907146-30906984 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 50, 91 |
| Conread position: | 469-648 |
| Cow position: | chr3:3818776-3818957 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 56, 45 |
| Conread position: | 470-644 |
| Cow position: | chr3:8746238-8746065 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 88, 99 |
| Conread position: | 470-646 |
| Cow position: | chr3:48211504-48211681 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 91, 80 |
| Conread position: | 471-635 |
| Cow position: | chr3:54905610-54905784 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 48, 9 |
| Conread position: | 473-645 |
| Cow position: | chr3:26741035-26740871 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 86, 68 |
| Conread position: | 475-642 |
| Cow position: | chr3:68086111-68085949 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 45, 34 |
| Conread position: | 476-619 |
| Cow position: | chr3:60142861-60142713 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 478-632 |
| Cow position: | chr3:83441549-83441393 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 119 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 41, 50 |
| Conread position: | 479-621 |
| Cow position: | chr3:10431602-10431745 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 479-648 |
| Cow position: | chr3:61411123-61411293 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 127 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 480-627 |
| Cow position: | chr3:67275124-67274973 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 39, 12 |
| Conread position: | 480-647 |
| Cow position: | chr3:1838550-1838722 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 129 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 79, 72 |
| Conread position: | 480-648 |
| Cow position: | chr3:43590895-43591067 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 480-648 |
| Cow position: | chr3:62628261-62628092 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 78, 118 |
| Conread position: | 481-632 |
| Cow position: | chr3:34315817-34315668 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 481-643 |
| Cow position: | chr3:84112576-84112410 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 483-637 |
| Cow position: | chr3:33797686-33797840 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 127 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 34, 96 |
| Conread position: | 489-620 |
| Cow position: | chr3:44643535-44643661 (view UCSC Genome Browser custom track) |
| Alignm length: | 132 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 496-639 |
| Cow position: | chr3:60145235-60145379 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 63, 45 |
| Conread position: | 498-637 |
| Cow position: | chr3:18866011-18865874 (view UCSC Genome Browser custom track) |
| Alignm length: | 141 |
| Alignm identity: | 116 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 62, 123 |
| Conread position: | 508-646 |
| Cow position: | chr3:76913045-76913185 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 111 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 29, 61 |
| Conread position: | 510-640 |
| Cow position: | chr3:44838292-44838417 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 516-613 |
| Cow position: | chr3:20878177-20878079 (view UCSC Genome Browser custom track) |
| Alignm length: | 99 |
| Alignm identity: | 85 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 516-631 |
| Cow position: | chr3:76614940-76615055 (view UCSC Genome Browser custom track) |
| Alignm length: | 117 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 45, 105 |
| Conread position: | 516-632 |
| Cow position: | chr3:9127395-9127278 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 92 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 523-646 |
| Cow position: | chr3:63449048-63449173 (view UCSC Genome Browser custom track) |
| Alignm length: | 126 |
| Alignm identity: | 100 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 542-637 |
| Cow position: | chr3:39894506-39894410 (view UCSC Genome Browser custom track) |
| Alignm length: | 97 |
| Alignm identity: | 82 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 17, 0 |
Show alignments to all cow chromosomes.