Cow genome map

Conread name: Ss1.1-mA2-MI-P-A2-aey-a-01-1-UM.s1.3

Conread position: 428-620
Cow position: chr5:17267891-17267699 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 145
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 26, 171

Conread position: 433-596
Cow position: chr5:3225965-3225809 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 47, 0

Conread position: 434-628
Cow position: chr5:25922812-25922616 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 146
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 10, 47

Conread position: 443-647
Cow position: chr5:38936568-38936374 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 150
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 13, 0

Conread position: 445-632
Cow position: chr5:34441762-34441574 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 139
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 75, 166

Conread position: 452-643
Cow position: chr5:54090062-54090251 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 151
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 107, 5

Conread position: 452-648
Cow position: chr5:25919603-25919416 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 154
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 54, 7

Conread position: 453-596
Cow position: chr5:49655994-49655857 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 103, 27

Conread position: 453-619
Cow position: chr5:70169672-70169516 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 129
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 85, 0

Conread position: 453-626
Cow position: chr5:7723691-7723864 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 125
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 66, 132

Conread position: 453-635
Cow position: chr5:27615544-27615722 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 140
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 106, 24

Conread position: 453-640
Cow position: chr5:46611073-46610882 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 146
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 24, 90

Conread position: 455-598
Cow position: chr5:7433131-7432986 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 120
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 84, 42

Conread position: 455-604
Cow position: chr5:4927536-4927381 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 121
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 120, 42

Conread position: 455-605
Cow position: chr5:18553925-18554072 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 104, 62

Conread position: 455-610
Cow position: chr5:34184252-34184410 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 89, 84

Conread position: 455-620
Cow position: chr5:30332983-30333145 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 135
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 103, 25

Conread position: 455-627
Cow position: chr5:6987478-6987652 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 96, 127

Conread position: 455-628
Cow position: chr5:15837861-15837692 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 138
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 104, 55

Conread position: 455-628
Cow position: chr5:21356857-21356689 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 30, 0

Conread position: 455-628
Cow position: chr5:50859894-50860066 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 139
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 66, 52

Conread position: 455-628
Cow position: chr5:64399041-64399206 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 103, 25

Conread position: 455-629
Cow position: chr5:46798272-46798446 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 62, 72

Conread position: 455-631
Cow position: chr5:68329960-68329783 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 51, 138

Conread position: 455-632
Cow position: chr5:21195090-21194916 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 141
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 103, 29

Conread position: 455-632
Cow position: chr5:28946031-28945854 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 142
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 65, 15

Conread position: 455-632
Cow position: chr5:38629319-38629493 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 104, 25

Conread position: 455-632
Cow position: chr5:45396381-45396206 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 115, 25

Conread position: 455-632
Cow position: chr5:58748799-58748974 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 103, 26

Conread position: 455-632
Cow position: chr5:59303250-59303085 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 104, 31

Conread position: 455-635
Cow position: chr5:25899843-25899666 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 144
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 104, 47

Conread position: 455-635
Cow position: chr5:34279574-34279403 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 103, 30

Conread position: 455-635
Cow position: chr5:40387844-40387672 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 65, 29

Conread position: 455-636
Cow position: chr5:39695680-39695862 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 146
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 104, 0

Conread position: 455-636
Cow position: chr5:50425455-50425277 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 11, 0

Conread position: 455-636
Cow position: chr5:58320440-58320260 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 67, 18

Conread position: 455-637
Cow position: chr5:36028116-36027936 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 144
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 167, 49

Conread position: 455-637
Cow position: chr5:36487667-36487483 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 145
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 85, 0

Conread position: 455-637
Cow position: chr5:48757968-48758153 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 145
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 65, 0

Conread position: 455-638
Cow position: chr5:39442326-39442509 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 148
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 96, 101

Conread position: 455-639
Cow position: chr5:3649429-3649251 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 142
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 107, 33

Conread position: 455-639
Cow position: chr5:17028123-17028308 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 150
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 64, 181

Conread position: 455-639
Cow position: chr5:48573743-48573568 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 56, 0

Conread position: 455-640
Cow position: chr5:328161-327988 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 135
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 75, 0

Conread position: 455-640
Cow position: chr5:41945879-41946061 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 12, 0

Conread position: 455-643
Cow position: chr5:31660629-31660442 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 59, 126

Conread position: 455-644
Cow position: chr5:1349764-1349573 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 67, 80

Conread position: 455-644
Cow position: chr5:21531077-21530892 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 154
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 64, 144

Conread position: 455-644
Cow position: chr5:66190016-66190203 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 143
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 104, 46

Conread position: 455-645
Cow position: chr5:23527603-23527409 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 146
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 65, 0

Conread position: 455-645
Cow position: chr5:23640983-23640801 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 145
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 103, 25

Conread position: 455-646
Cow position: chr5:56385243-56385435 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 37, 89

Conread position: 455-647
Cow position: chr5:34914524-34914336 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 147
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 65, 146

Conread position: 455-648
Cow position: chr5:41598683-41598490 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 152
Alignm E-value: 9.99995e-41
Alignm gaps (pig, cow): 104, 176

Conread position: 455-648
Cow position: chr5:41604656-41604847 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 161
Alignm E-value: 0
Alignm gaps (pig, cow): 104, 25

Conread position: 456-620
Cow position: chr5:38717339-38717509 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 63, 31

Conread position: 456-621
Cow position: chr5:1343821-1343661 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 456-623
Cow position: chr5:39875153-39875322 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 65, 0

Conread position: 456-628
Cow position: chr5:48178357-48178179 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 132
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 48, 0

Conread position: 456-632
Cow position: chr5:40711406-40711240 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 136
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 456-632
Cow position: chr5:42782695-42782522 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 63, 143

Conread position: 456-632
Cow position: chr5:53145723-53145540 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 63, 147

Conread position: 456-635
Cow position: chr5:70387811-70388000 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 149
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 39, 160

Conread position: 456-637
Cow position: chr5:56153646-56153831 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 133
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 64, 24

Conread position: 456-638
Cow position: chr5:27102765-27102581 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 64, 0

Conread position: 456-638
Cow position: chr5:29756367-29756549 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 64, 45

Conread position: 456-640
Cow position: chr5:27419700-27419515 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 64, 180

Conread position: 456-645
Cow position: chr5:67149984-67149799 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 144
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 102, 24

Conread position: 456-646
Cow position: chr5:71454583-71454391 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 133
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 456-647
Cow position: chr5:47836577-47836772 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 151
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 58, 85

Conread position: 457-629
Cow position: chr5:42316879-42316711 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 102, 55

Conread position: 458-595
Cow position: chr5:51503039-51503173 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 105
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 100, 22

Conread position: 458-636
Cow position: chr5:45558955-45559132 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 83, 22

Conread position: 459-612
Cow position: chr5:26595071-26594912 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 52, 0

Conread position: 459-620
Cow position: chr5:37757806-37757651 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 97, 115

Conread position: 459-627
Cow position: chr5:1950022-1949856 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 58, 75

Conread position: 459-628
Cow position: chr5:55089173-55089344 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 459-632
Cow position: chr5:23529248-23529076 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 137
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 61, 21

Conread position: 459-632
Cow position: chr5:29844312-29844487 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 61, 0

Conread position: 459-632
Cow position: chr5:47680985-47680810 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 146
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 100, 0

Conread position: 459-632
Cow position: chr5:50575816-50575994 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 129
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 100, 169

Conread position: 459-647
Cow position: chr5:58343891-58344081 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 149
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 99, 0

Conread position: 459-648
Cow position: chr5:3058956-3059141 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 149
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 100, 20

Conread position: 460-620
Cow position: chr5:56799234-56799078 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 59, 66

Conread position: 460-632
Cow position: chr5:49945946-49946112 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 136
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 99, 30

Conread position: 460-637
Cow position: chr5:15483065-15483247 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 145
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 56, 0

Conread position: 460-646
Cow position: chr5:27502969-27503147 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 52, 83

Conread position: 461-623
Cow position: chr5:63188288-63188133 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 461-627
Cow position: chr5:63328858-63328698 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 130
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 98, 108

Conread position: 461-635
Cow position: chr5:27411367-27411196 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 134
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 58, 138

Conread position: 461-648
Cow position: chr5:49567464-49567643 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 16, 0

Conread position: 463-632
Cow position: chr5:72363979-72363806 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 96, 60

Conread position: 465-637
Cow position: chr5:41605769-41605605 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 91, 19

Conread position: 466-635
Cow position: chr5:23366725-23366558 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 135
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 93, 134

Conread position: 466-637
Cow position: chr5:25681316-25681149 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 135
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 93, 65

Conread position: 466-637
Cow position: chr5:27007937-27008106 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 135
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 104, 31

Conread position: 466-639
Cow position: chr5:42049724-42049894 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 53, 30

Conread position: 468-637
Cow position: chr5:75687283-75687119 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 136
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 135, 0

Conread position: 469-620
Cow position: chr5:41334646-41334804 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 36, 0

Conread position: 470-608
Cow position: chr5:19131894-19132034 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 89, 0

Conread position: 470-644
Cow position: chr5:18695203-18695373 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 143
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 49, 129

Conread position: 470-645
Cow position: chr5:37272438-37272609 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 131
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 89, 71

Conread position: 472-635
Cow position: chr5:18276527-18276686 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 133
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 67, 0

Conread position: 472-636
Cow position: chr5:12901120-12900953 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 87, 0

Conread position: 473-605
Cow position: chr5:23536227-23536360 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 108
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 46, 24

Conread position: 473-632
Cow position: chr5:14154194-14154349 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 85, 121

Conread position: 475-644
Cow position: chr5:36825369-36825532 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 83, 88

Conread position: 475-648
Cow position: chr5:16025421-16025240 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 68

Conread position: 479-632
Cow position: chr5:38738837-38738989 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 41, 63

Conread position: 480-626
Cow position: chr5:68081916-68081780 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 0

Conread position: 480-648
Cow position: chr5:45028763-45028932 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 127
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 78, 8

Conread position: 481-610
Cow position: chr5:17097766-17097893 (view UCSC Genome Browser custom track)
Alignm length: 131
Alignm identity: 105
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 77, 68

Conread position: 481-635
Cow position: chr5:33697494-33697344 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 77, 114

Conread position: 481-636
Cow position: chr5:39753599-39753446 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 120
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 77, 6

Conread position: 481-639
Cow position: chr5:27293615-27293455 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 127
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 78, 0

Conread position: 481-648
Cow position: chr5:40234175-40234334 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 153, 58

Conread position: 481-648
Cow position: chr5:51048674-51048842 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 78, 127

Conread position: 482-635
Cow position: chr5:5929514-5929669 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 127
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 37, 0

Conread position: 483-627
Cow position: chr5:37068940-37069083 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 116
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 34, 28

Conread position: 484-632
Cow position: chr5:39134203-39134053 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 127
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 35, 0

Conread position: 485-648
Cow position: chr5:45938491-45938333 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 73, 91

Conread position: 490-646
Cow position: chr5:70877418-70877262 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 136, 68

Conread position: 495-637
Cow position: chr5:55411972-55411832 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 115
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 64, 5

Conread position: 498-635
Cow position: chr5:48067770-48067908 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 72, 0

Conread position: 504-645
Cow position: chr5:13890545-13890689 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 110
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 16, 0

Conread position: 514-637
Cow position: chr5:57381638-57381757 (view UCSC Genome Browser custom track)
Alignm length: 124
Alignm identity: 97
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 526-626
Cow position: chr5:22304243-22304344 (view UCSC Genome Browser custom track)
Alignm length: 102
Alignm identity: 84
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 529-639
Cow position: chr5:65924547-65924438 (view UCSC Genome Browser custom track)
Alignm length: 111
Alignm identity: 89
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 97, 0

Conread position: 559-636
Cow position: chr5:40043440-40043363 (view UCSC Genome Browser custom track)
Alignm length: 78
Alignm identity: 71
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.