Cow genome map
| Conread name: | Ss1.1-mA2-MI-P-A2-aez-g-05-1-UM.s1.3 |
| Conread position: | 1-290 |
| Cow position: | |
| Alignm length: | 290 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-311 |
| Cow position: | |
| Alignm length: | 314 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 159, 155 |
| Conread position: | 1-345 |
| Cow position: | |
| Alignm length: | 347 |
| Alignm identity: | 223 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 51, 62 |
| Conread position: | 1-351 |
| Cow position: | |
| Alignm length: | 353 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 51, 62 |
| Conread position: | 1-352 |
| Cow position: | |
| Alignm length: | 352 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-353 |
| Cow position: | |
| Alignm length: | 355 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 155, 147 |
| Conread position: | 1-356 |
| Cow position: | |
| Alignm length: | 357 |
| Alignm identity: | 218 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 260, 265 |
| Conread position: | 1-359 |
| Cow position: | |
| Alignm length: | 359 |
| Alignm identity: | 217 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-361 |
| Cow position: | |
| Alignm length: | 364 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 222, 241 |
| Conread position: | 1-362 |
| Cow position: | |
| Alignm length: | 363 |
| Alignm identity: | 220 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 257, 272 |
| Conread position: | 1-362 |
| Cow position: | |
| Alignm length: | 363 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 261, 265 |
| Conread position: | 1-362 |
| Cow position: | |
| Alignm length: | 363 |
| Alignm identity: | 226 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 84, 63 |
| Conread position: | 1-362 |
| Cow position: | |
| Alignm length: | 364 |
| Alignm identity: | 237 |
| Alignm E-value: | 4e-39 |
| Alignm gaps (pig, cow): | 50, 76 |
| Conread position: | 1-362 |
| Cow position: | |
| Alignm length: | 365 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 51, 66 |
| Conread position: | 1-362 |
| Cow position: | |
| Alignm length: | 366 |
| Alignm identity: | 224 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 56, 80 |
| Conread position: | 1-362 |
| Cow position: | |
| Alignm length: | 362 |
| Alignm identity: | 220 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-363 |
| Cow position: | |
| Alignm length: | 364 |
| Alignm identity: | 237 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 235, 224 |
| Conread position: | 1-363 |
| Cow position: | |
| Alignm length: | 364 |
| Alignm identity: | 233 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 162, 167 |
| Conread position: | 1-363 |
| Cow position: | |
| Alignm length: | 364 |
| Alignm identity: | 223 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 329, 335 |
| Conread position: | 1-363 |
| Cow position: | |
| Alignm length: | 366 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 17, 23 |
| Conread position: | 1-363 |
| Cow position: | |
| Alignm length: | 364 |
| Alignm identity: | 242 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 163, 169 |
| Conread position: | 1-363 |
| Cow position: | |
| Alignm length: | 366 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 51, 63 |
| Conread position: | 1-363 |
| Cow position: | |
| Alignm length: | 364 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 154, 169 |
| Conread position: | 1-363 |
| Cow position: | |
| Alignm length: | 364 |
| Alignm identity: | 234 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 313, 317 |
| Conread position: | 1-364 |
| Cow position: | |
| Alignm length: | 366 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 83, 63 |
| Conread position: | 1-368 |
| Cow position: | |
| Alignm length: | 370 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 140, 167 |
| Conread position: | 1-369 |
| Cow position: | |
| Alignm length: | 371 |
| Alignm identity: | 236 |
| Alignm E-value: | 9e-35 |
| Alignm gaps (pig, cow): | 83, 63 |
| Conread position: | 1-370 |
| Cow position: | |
| Alignm length: | 371 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 149 |
| Conread position: | 1-374 |
| Cow position: | |
| Alignm length: | 375 |
| Alignm identity: | 233 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 173, 188 |
| Conread position: | 1-374 |
| Cow position: | |
| Alignm length: | 377 |
| Alignm identity: | 250 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 70, 64 |
| Conread position: | 1-374 |
| Cow position: | |
| Alignm length: | 374 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-374 |
| Cow position: | |
| Alignm length: | 376 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 51, 62 |
| Conread position: | 1-374 |
| Cow position: | |
| Alignm length: | 376 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 51, 70 |
| Conread position: | 1-374 |
| Cow position: | |
| Alignm length: | 377 |
| Alignm identity: | 236 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 70, 85 |
| Conread position: | 1-374 |
| Cow position: | |
| Alignm length: | 377 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 64, 71 |
| Conread position: | 1-374 |
| Cow position: | |
| Alignm length: | 375 |
| Alignm identity: | 230 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 259, 265 |
| Conread position: | 1-379 |
| Cow position: | |
| Alignm length: | 384 |
| Alignm identity: | 258 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 48, 67 |
| Conread position: | 1-380 |
| Cow position: | |
| Alignm length: | 380 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 385 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 138, 156 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 383 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 148 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 384 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 160, 155 |
| Conread position: | 1-382 |
| Cow position: | |
| Alignm length: | 382 |
| Alignm identity: | 239 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-384 |
| Cow position: | |
| Alignm length: | 385 |
| Alignm identity: | 239 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 174, 181 |
| Conread position: | 1-384 |
| Cow position: | |
| Alignm length: | 388 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 19, 28 |
| Conread position: | 1-390 |
| Cow position: | |
| Alignm length: | 392 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 68 |
| Conread position: | 1-394 |
| Cow position: | |
| Alignm length: | 396 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 322, 313 |
| Conread position: | 1-400 |
| Cow position: | |
| Alignm length: | 407 |
| Alignm identity: | 256 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 51, 81 |
| Conread position: | 1-400 |
| Cow position: | |
| Alignm length: | 402 |
| Alignm identity: | 248 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 260, 265 |
| Conread position: | 1-403 |
| Cow position: | |
| Alignm length: | 403 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 383, 0 |
| Conread position: | 1-406 |
| Cow position: | |
| Alignm length: | 409 |
| Alignm identity: | 268 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 79 |
| Conread position: | 1-410 |
| Cow position: | |
| Alignm length: | 413 |
| Alignm identity: | 246 |
| Alignm E-value: | 8e-24 |
| Alignm gaps (pig, cow): | 261, 265 |
| Conread position: | 1-440 |
| Cow position: | |
| Alignm length: | 445 |
| Alignm identity: | 278 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 144, 157 |
| Conread position: | 1-445 |
| Cow position: | |
| Alignm length: | 447 |
| Alignm identity: | 281 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 413, 0 |
| Conread position: | 1-445 |
| Cow position: | |
| Alignm length: | 447 |
| Alignm identity: | 276 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 393, 409 |
| Conread position: | 1-447 |
| Cow position: | |
| Alignm length: | 450 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 391, 408 |
| Conread position: | 1-448 |
| Cow position: | |
| Alignm length: | 455 |
| Alignm identity: | 300 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 75 |
| Conread position: | 1-452 |
| Cow position: | |
| Alignm length: | 458 |
| Alignm identity: | 271 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 171, 178 |
| Conread position: | 1-467 |
| Cow position: | |
| Alignm length: | 472 |
| Alignm identity: | 301 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 159, 149 |
| Conread position: | 1-467 |
| Cow position: | |
| Alignm length: | 471 |
| Alignm identity: | 284 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 64, 71 |
| Conread position: | 1-478 |
| Cow position: | |
| Alignm length: | 485 |
| Alignm identity: | 310 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 75, 61 |
| Conread position: | 1-482 |
| Cow position: | |
| Alignm length: | 488 |
| Alignm identity: | 298 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 238, 222 |
| Conread position: | 2-429 |
| Cow position: | |
| Alignm length: | 432 |
| Alignm identity: | 257 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 292, 301 |
| Conread position: | 4-368 |
| Cow position: | |
| Alignm length: | 366 |
| Alignm identity: | 218 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 250, 226 |
| Conread position: | 5-213 |
| Cow position: | |
| Alignm length: | 211 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 28, 62 |
| Conread position: | 5-346 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 231 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 60, 64 |
| Conread position: | 5-382 |
| Cow position: | |
| Alignm length: | 379 |
| Alignm identity: | 242 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 60, 64 |
| Conread position: | 5-448 |
| Cow position: | |
| Alignm length: | 450 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 71 |
| Conread position: | 5-448 |
| Cow position: | |
| Alignm length: | 448 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 60, 64 |
| Conread position: | 6-359 |
| Cow position: | |
| Alignm length: | 355 |
| Alignm identity: | 220 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 50, 60 |
| Conread position: | 7-362 |
| Cow position: | |
| Alignm length: | 357 |
| Alignm identity: | 226 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 48, 56 |
| Conread position: | 7-408 |
| Cow position: | |
| Alignm length: | 405 |
| Alignm identity: | 259 |
| Alignm E-value: | 5e-40 |
| Alignm gaps (pig, cow): | 45, 56 |
| Conread position: | 8-374 |
| Cow position: | |
| Alignm length: | 367 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 10-455 |
| Cow position: | |
| Alignm length: | 449 |
| Alignm identity: | 286 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 62, 55 |
| Conread position: | 12-379 |
| Cow position: | |
| Alignm length: | 373 |
| Alignm identity: | 240 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 148, 158 |
| Conread position: | 13-355 |
| Cow position: | |
| Alignm length: | 344 |
| Alignm identity: | 209 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 144, 137 |
| Conread position: | 13-359 |
| Cow position: | |
| Alignm length: | 348 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 39, 65 |
| Conread position: | 13-361 |
| Cow position: | |
| Alignm length: | 351 |
| Alignm identity: | 214 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 311, 0 |
| Conread position: | 13-362 |
| Cow position: | |
| Alignm length: | 352 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 145, 155 |
| Conread position: | 13-363 |
| Cow position: | |
| Alignm length: | 351 |
| Alignm identity: | 220 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-363 |
| Cow position: | |
| Alignm length: | 354 |
| Alignm identity: | 227 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 36, 46 |
| Conread position: | 13-363 |
| Cow position: | |
| Alignm length: | 354 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 39, 48 |
| Conread position: | 13-368 |
| Cow position: | |
| Alignm length: | 359 |
| Alignm identity: | 226 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 53, 73 |
| Conread position: | 13-374 |
| Cow position: | |
| Alignm length: | 366 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 58, 52 |
| Conread position: | 13-379 |
| Cow position: | |
| Alignm length: | 368 |
| Alignm identity: | 234 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 156, 150 |
| Conread position: | 17-410 |
| Cow position: | |
| Alignm length: | 397 |
| Alignm identity: | 251 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 188, 184 |
| Conread position: | 21-362 |
| Cow position: | |
| Alignm length: | 342 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 21-362 |
| Cow position: | |
| Alignm length: | 342 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 22-342 |
| Cow position: | |
| Alignm length: | 322 |
| Alignm identity: | 212 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 58, 44 |
| Conread position: | 22-362 |
| Cow position: | |
| Alignm length: | 341 |
| Alignm identity: | 219 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 22-368 |
| Cow position: | |
| Alignm length: | 347 |
| Alignm identity: | 217 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 25-300 |
| Cow position: | |
| Alignm length: | 278 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 92, 129 |
| Conread position: | 25-467 |
| Cow position: | |
| Alignm length: | 449 |
| Alignm identity: | 278 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 27, 52 |
| Conread position: | 25-499 |
| Cow position: | |
| Alignm length: | 482 |
| Alignm identity: | 305 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 200, 216 |
| Conread position: | 27-445 |
| Cow position: | |
| Alignm length: | 424 |
| Alignm identity: | 260 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 59, 44 |
| Conread position: | 29-613 |
| Cow position: | |
| Alignm length: | 599 |
| Alignm identity: | 358 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 22, 37 |
| Conread position: | 41-445 |
| Cow position: | |
| Alignm length: | 411 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 122, 129 |
| Conread position: | 43-359 |
| Cow position: | |
| Alignm length: | 320 |
| Alignm identity: | 199 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 42, 32 |
| Conread position: | 76-467 |
| Cow position: | |
| Alignm length: | 396 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 318, 308 |
| Conread position: | 76-478 |
| Cow position: | |
| Alignm length: | 407 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 167, 144 |
| Conread position: | 84-332 |
| Cow position: | |
| Alignm length: | 250 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 178, 182 |
| Conread position: | 84-359 |
| Cow position: | |
| Alignm length: | 278 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 81, 85 |
| Conread position: | 84-452 |
| Cow position: | |
| Alignm length: | 376 |
| Alignm identity: | 241 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 52, 62 |
| Conread position: | 84-455 |
| Cow position: | |
| Alignm length: | 375 |
| Alignm identity: | 226 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 178, 182 |
| Conread position: | 85-363 |
| Cow position: | |
| Alignm length: | 279 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 97-363 |
| Cow position: | |
| Alignm length: | 267 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 261, 0 |
| Conread position: | 97-374 |
| Cow position: | |
| Alignm length: | 279 |
| Alignm identity: | 185 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 155, 149 |
| Conread position: | 103-359 |
| Cow position: | |
| Alignm length: | 257 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 106-480 |
| Cow position: | |
| Alignm length: | 381 |
| Alignm identity: | 240 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 69, 74 |
| Conread position: | 156-434 |
| Cow position: | |
| Alignm length: | 283 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 171, 158 |
Show alignments to all cow chromosomes.