Cow genome map
| Conread name: | Ss1.1-mA2-MI-P-A2-aez-g-05-1-UM.s1.3 |
| Conread position: | 1-199 |
| Cow position: | chr24:17070858-17071057 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 193, 0 |
| Conread position: | 1-213 |
| Cow position: | chr24:17013311-17013522 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 192, 0 |
| Conread position: | 1-307 |
| Cow position: | chr24:17013227-17013532 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 190 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 164, 169 |
| Conread position: | 1-358 |
| Cow position: | chr24:17070690-17071047 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 154, 148 |
| Conread position: | 1-362 |
| Cow position: | chr24:17035475-17035114 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 242 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 50, 56 |
| Conread position: | 1-363 |
| Cow position: | chr24:17035559-17035197 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 261, 265 |
| Conread position: | 1-363 |
| Cow position: | chr24:17036231-17035869 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 261, 265 |
| Conread position: | 1-382 |
| Cow position: | chr24:17070438-17070819 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-382 |
| Cow position: | chr24:17078030-17077649 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 169 |
| Conread position: | 1-400 |
| Cow position: | chr24:17077862-17077463 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 164, 169 |
| Conread position: | 1-433 |
| Cow position: | chr24:17077946-17077513 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 277 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 393, 383 |
| Conread position: | 1-443 |
| Cow position: | chr24:17078114-17077672 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 385, 409 |
| Conread position: | 1-444 |
| Cow position: | chr24:17035391-17034948 (view UCSC Genome Browser custom track) |
| Alignm length: | 446 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 313, 319 |
| Conread position: | 1-445 |
| Cow position: | chr24:17035643-17035197 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 393, 383 |
| Conread position: | 1-467 |
| Cow position: | chr24:17070522-17070989 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 318 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 322, 316 |
| Conread position: | 1-510 |
| Cow position: | chr24:17035895-17035384 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 319 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 393, 410 |
| Conread position: | 1-510 |
| Cow position: | chr24:17036063-17035552 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 322, 317 |
| Conread position: | 1-510 |
| Cow position: | chr24:17036147-17035636 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 320, 316 |
| Conread position: | 1-510 |
| Cow position: | chr24:17036399-17035888 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 221, 209 |
| Conread position: | 1-609 |
| Cow position: | chr24:17036483-17035867 (view UCSC Genome Browser custom track) |
| Alignm length: | 619 |
| Alignm identity: | 386 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 314, 301 |
| Conread position: | 5-286 |
| Cow position: | chr24:17070778-17071059 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 198 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 66, 61 |
| Conread position: | 5-410 |
| Cow position: | chr24:17013147-17013553 (view UCSC Genome Browser custom track) |
| Alignm length: | 410 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 19 |
| Conread position: | 6-433 |
| Cow position: | chr24:17070611-17071039 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 296 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 385, 378 |
| Conread position: | 7-445 |
| Cow position: | chr24:17035721-17035283 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 294 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 387, 404 |
| Conread position: | 7-447 |
| Cow position: | chr24:17036641-17036204 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 25 |
| Conread position: | 13-443 |
| Cow position: | chr24:17035967-17035537 (view UCSC Genome Browser custom track) |
| Alignm length: | 433 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 373, 398 |
| Conread position: | 13-445 |
| Cow position: | chr24:17035799-17035367 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 295 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 53 |
| Conread position: | 22-503 |
| Cow position: | chr24:17036546-17036063 (view UCSC Genome Browser custom track) |
| Alignm length: | 486 |
| Alignm identity: | 312 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 357, 373 |
| Conread position: | 23-246 |
| Cow position: | chr24:16986431-16986654 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 29, 40 |
| Conread position: | 46-510 |
| Cow position: | chr24:17078153-17077687 (view UCSC Genome Browser custom track) |
| Alignm length: | 469 |
| Alignm identity: | 303 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 340, 365 |
| Conread position: | 107-339 |
| Cow position: | chr24:16986431-16986666 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 133, 110 |
| Conread position: | 118-613 |
| Cow position: | chr24:17070387-17070890 (view UCSC Genome Browser custom track) |
| Alignm length: | 508 |
| Alignm identity: | 309 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 16, 25 |
Show alignments to all cow chromosomes.