Cow genome map
| Conread name: | Ss1.1-mA2-MI-P-A2-aez-g-05-1-UM.s1.3 |
| Conread position: | 1-267 |
| Cow position: | chr3:68027491-68027757 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-268 |
| Cow position: | chr3:68046084-68046351 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 179 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 258, 264 |
| Conread position: | 1-363 |
| Cow position: | chr3:62742674-62743030 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 246 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 212, 75 |
| Conread position: | 1-371 |
| Cow position: | chr3:62742925-62743273 (view UCSC Genome Browser custom track) |
| Alignm length: | 371 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 1-374 |
| Cow position: | chr3:68045832-68046205 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 235 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 48, 56 |
| Conread position: | 1-380 |
| Cow position: | chr3:77351011-77350641 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 32, 42 |
| Conread position: | 1-382 |
| Cow position: | chr3:68027323-68027704 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 17, 22 |
| Conread position: | 1-382 |
| Cow position: | chr3:68045748-68046129 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 246 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-429 |
| Cow position: | chr3:62721926-62721500 (view UCSC Genome Browser custom track) |
| Alignm length: | 431 |
| Alignm identity: | 284 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 367, 380 |
| Conread position: | 1-444 |
| Cow position: | chr3:62722094-62721649 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 302 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 65 |
| Conread position: | 1-445 |
| Cow position: | chr3:62722010-62721564 (view UCSC Genome Browser custom track) |
| Alignm length: | 447 |
| Alignm identity: | 301 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 391, 0 |
| Conread position: | 1-449 |
| Cow position: | chr3:62743076-62743519 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 284 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 376, 40 |
| Conread position: | 1-468 |
| Cow position: | chr3:62742342-62742804 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 304 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 49, 12 |
| Conread position: | 1-478 |
| Cow position: | chr3:62742509-62742983 (view UCSC Genome Browser custom track) |
| Alignm length: | 481 |
| Alignm identity: | 302 |
| Alignm E-value: | 8.99998e-41 |
| Alignm gaps (pig, cow): | 375, 132 |
| Conread position: | 1-487 |
| Cow position: | chr3:68027071-68027558 (view UCSC Genome Browser custom track) |
| Alignm length: | 492 |
| Alignm identity: | 309 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 236, 244 |
| Conread position: | 1-613 |
| Cow position: | chr3:62722346-62721726 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 410 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 8 |
| Conread position: | 5-382 |
| Cow position: | chr3:77351090-77350720 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 244 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 12, 18 |
| Conread position: | 6-417 |
| Cow position: | chr3:68045921-68046333 (view UCSC Genome Browser custom track) |
| Alignm length: | 413 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 380, 0 |
| Conread position: | 7-361 |
| Cow position: | chr3:68046006-68046358 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 235 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 336, 0 |
| Conread position: | 7-368 |
| Cow position: | chr3:77350927-77350568 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 236 |
| Alignm E-value: | 8e-30 |
| Alignm gaps (pig, cow): | 45, 51 |
| Conread position: | 7-503 |
| Cow position: | chr3:68027245-68027743 (view UCSC Genome Browser custom track) |
| Alignm length: | 501 |
| Alignm identity: | 306 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 44, 50 |
| Conread position: | 13-312 |
| Cow position: | chr3:68027419-68027718 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 205 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 13-445 |
| Cow position: | chr3:62742270-62742700 (view UCSC Genome Browser custom track) |
| Alignm length: | 435 |
| Alignm identity: | 271 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 67, 55 |
| Conread position: | 15-468 |
| Cow position: | chr3:68045592-68046048 (view UCSC Genome Browser custom track) |
| Alignm length: | 462 |
| Alignm identity: | 294 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 10, 53 |
| Conread position: | 17-448 |
| Cow position: | chr3:68026919-68027352 (view UCSC Genome Browser custom track) |
| Alignm length: | 437 |
| Alignm identity: | 272 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 142, 131 |
| Conread position: | 85-467 |
| Cow position: | chr3:68045580-68045963 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 251 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 73, 62 |
| Conread position: | 85-499 |
| Cow position: | chr3:62742258-62742670 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 252 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 304, 94 |
Show alignments to all cow chromosomes.