Cow genome map
| Conread name: | Ss1.1-mA2-MI-P-A2-aez-g-05-1-UM.s1.3 |
| Conread position: | 1-285 |
| Cow position: | chr6:49396692-49396976 (view UCSC Genome Browser custom track) |
| Alignm length: | 286 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 252, 247 |
| Conread position: | 1-293 |
| Cow position: | chr6:49341139-49341431 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 209 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 159, 147 |
| Conread position: | 1-358 |
| Cow position: | chr6:49396194-49396545 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 222, 37 |
| Conread position: | 1-358 |
| Cow position: | chr6:49396356-49396713 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 221 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-362 |
| Cow position: | chr6:49428879-49429240 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 219 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 86, 55 |
| Conread position: | 1-363 |
| Cow position: | chr6:49396272-49396634 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 51, 62 |
| Conread position: | 1-363 |
| Cow position: | chr6:49396524-49396886 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 230 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 1-386 |
| Cow position: | chr6:49396608-49396995 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 235 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 370, 0 |
| Conread position: | 1-510 |
| Cow position: | chr6:49340467-49340978 (view UCSC Genome Browser custom track) |
| Alignm length: | 515 |
| Alignm identity: | 334 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 231, 216 |
| Conread position: | 1-609 |
| Cow position: | chr6:49340551-49341167 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 399 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 325, 318 |
| Conread position: | 1-609 |
| Cow position: | chr6:49340719-49341335 (view UCSC Genome Browser custom track) |
| Alignm length: | 621 |
| Alignm identity: | 405 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 157, 150 |
| Conread position: | 1-617 |
| Cow position: | chr6:49340803-49341427 (view UCSC Genome Browser custom track) |
| Alignm length: | 627 |
| Alignm identity: | 423 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 64 |
| Conread position: | 4-363 |
| Cow position: | chr6:49396031-49396382 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 6-467 |
| Cow position: | chr6:49340388-49340850 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 387, 402 |
| Conread position: | 7-600 |
| Cow position: | chr6:49340149-49340738 (view UCSC Genome Browser custom track) |
| Alignm length: | 606 |
| Alignm identity: | 375 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 173, 177 |
| Conread position: | 22-359 |
| Cow position: | chr6:49396131-49396462 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 55, 45 |
| Conread position: | 97-362 |
| Cow position: | chr6:49362330-49362595 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 85, 80 |
Show alignments to all cow chromosomes.