Cow genome map


           Conread name:
           Ss1.1-mCP1-MI-P-CP1-nza-e-11-0-UI.s1.3
        

               Conread position:
               1-145
               

               Cow position:
               chr17:45231249-45231399 (view UCSC Genome Browser custom track)
               

               Alignm length:
               151
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               142-260
               

               Cow position:
               chr17:45241466-45241584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               119
               

               Alignm identity:
               108
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               259-355
               

               Cow position:
               chr17:45243349-45243445 (view UCSC Genome Browser custom track)
               

               Alignm length:
               97
               

               Alignm identity:
               91
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               353-443
               

               Cow position:
               chr17:45245467-45245557 (view UCSC Genome Browser custom track)
               

               Alignm length:
               91
               

               Alignm identity:
               79
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               515-799
               

               Cow position:
               chr17:45247778-45248062 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               842-996
               

               Cow position:
               chr17:45250293-45250447 (view UCSC Genome Browser custom track)
               

               Alignm length:
               155
               

               Alignm identity:
               123
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1054-1155
               

               Cow position:
               chr17:45251410-45251511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               102
               

               Alignm identity:
               83
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1154-1282
               

               Cow position:
               chr17:45253356-45253484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               129
               

               Alignm identity:
               115
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.