Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-mCP1-MI-P-CP1-nzc-k-01-0-UI.s1.3
        

               Conread position:
               310-682
               

               Cow position:
               chr16:2273600-2273972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               377
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               13, 189
               

               Conread position:
               310-684
               

               Cow position:
               chr16:194364-193999 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 87
               

               Conread position:
               321-621
               

               Cow position:
               chr16:55912213-55911907 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               210
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               29, 10
               

               Conread position:
               331-683
               

               Cow position:
               chr16:41684730-41684381 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 91
               

               Conread position:
               331-684
               

               Cow position:
               chr16:15494031-15494372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               244
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               22, 7
               

               Conread position:
               333-489
               

               Cow position:
               chr16:39365320-39365161 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               335-684
               

               Cow position:
               chr16:31424409-31424760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               247
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               86, 153
               

               Conread position:
               336-684
               

               Cow position:
               chr16:30999801-31000140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               245
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               44, 14
               

               Conread position:
               337-533
               

               Cow position:
               chr16:19343181-19342987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               141
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               86, 148
               

               Conread position:
               337-684
               

               Cow position:
               chr16:13434623-13434982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               244
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               24, 9
               

               Conread position:
               337-684
               

               Cow position:
               chr16:52626939-52627286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               243
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               84, 44
               

               Conread position:
               338-477
               

               Cow position:
               chr16:25259375-25259512 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               110
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               82, 17
               

               Conread position:
               338-491
               

               Cow position:
               chr16:15568824-15568976 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               116
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               338-497
               

               Cow position:
               chr16:28469214-28469053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               338-497
               

               Cow position:
               chr16:55149803-55149961 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               83, 20
               

               Conread position:
               338-508
               

               Cow position:
               chr16:16538378-16538543 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               131
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               82, 66
               

               Conread position:
               338-528
               

               Cow position:
               chr16:20192600-20192418 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               146
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               83, 108
               

               Conread position:
               338-531
               

               Cow position:
               chr16:41822434-41822624 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               83, 110
               

               Conread position:
               338-533
               

               Cow position:
               chr16:4799150-4798958 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               151
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               82, 123
               

               Conread position:
               338-537
               

               Cow position:
               chr16:5663413-5663604 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               149
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               81, 108
               

               Conread position:
               338-545
               

               Cow position:
               chr16:25443199-25443404 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               83, 118
               

               Conread position:
               338-565
               

               Cow position:
               chr16:43845650-43845425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               234
               

               Alignm identity:
               163
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               73, 124
               

               Conread position:
               338-566
               

               Cow position:
               chr16:9876359-9876129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               233
               

               Alignm identity:
               154
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               82, 159
               

               Conread position:
               338-575
               

               Cow position:
               chr16:25463338-25463105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               241
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               82, 108
               

               Conread position:
               338-578
               

               Cow position:
               chr16:25126983-25126746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               182
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               83, 151
               

               Conread position:
               338-592
               

               Cow position:
               chr16:56915539-56915289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               258
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               26, 15
               

               Conread position:
               338-602
               

               Cow position:
               chr16:28269491-28269236 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               200
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 78
               

               Conread position:
               338-604
               

               Cow position:
               chr16:18667913-18668183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               200
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               88, 39
               

               Conread position:
               338-606
               

               Cow position:
               chr16:27980804-27980539 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               192
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               83, 148
               

               Conread position:
               338-607
               

               Cow position:
               chr16:2890946-2890677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 150
               

               Conread position:
               338-607
               

               Cow position:
               chr16:16031483-16031748 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               205
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               83, 25
               

               Conread position:
               338-611
               

               Cow position:
               chr16:39645219-39645491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               278
               

               Alignm identity:
               205
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 107
               

               Conread position:
               338-621
               

               Cow position:
               chr16:49254682-49254403 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               203
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               338-622
               

               Cow position:
               chr16:20666766-20667050 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               26, 16
               

               Conread position:
               338-625
               

               Cow position:
               chr16:25948736-25948458 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               83, 148
               

               Conread position:
               338-661
               

               Cow position:
               chr16:40841979-40842299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               81, 159
               

               Conread position:
               338-666
               

               Cow position:
               chr16:5654748-5655071 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 0
               

               Conread position:
               338-669
               

               Cow position:
               chr16:8814538-8814207 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 164
               

               Conread position:
               338-669
               

               Cow position:
               chr16:19672796-19672463 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               48, 148
               

               Conread position:
               338-670
               

               Cow position:
               chr16:34111-34443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 159
               

               Conread position:
               338-671
               

               Cow position:
               chr16:29207652-29207314 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 150
               

               Conread position:
               338-673
               

               Cow position:
               chr16:16992619-16992950 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               243
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               211, 67
               

               Conread position:
               338-673
               

               Cow position:
               chr16:23250410-23250087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               237
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               136, 85
               

               Conread position:
               338-673
               

               Cow position:
               chr16:41563948-41564284 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               173, 41
               

               Conread position:
               338-673
               

               Cow position:
               chr16:42804328-42804655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 145
               

               Conread position:
               338-674
               

               Cow position:
               chr16:16229874-16230214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 110
               

               Conread position:
               338-674
               

               Cow position:
               chr16:19275704-19276032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 34
               

               Conread position:
               338-674
               

               Cow position:
               chr16:25955996-25955672 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 157
               

               Conread position:
               338-675
               

               Cow position:
               chr16:47475587-47475918 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               235
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               78, 20
               

               Conread position:
               338-681
               

               Cow position:
               chr16:16239529-16239190 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 108
               

               Conread position:
               338-682
               

               Cow position:
               chr16:51086352-51086692 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 108
               

               Conread position:
               338-683
               

               Cow position:
               chr16:6944844-6945167 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               247
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               208, 85
               

               Conread position:
               338-683
               

               Cow position:
               chr16:11284790-11285128 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 126
               

               Conread position:
               338-683
               

               Cow position:
               chr16:14663736-14663393 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 103
               

               Conread position:
               338-683
               

               Cow position:
               chr16:16268315-16267984 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 85
               

               Conread position:
               338-683
               

               Cow position:
               chr16:20277419-20277764 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 160
               

               Conread position:
               338-683
               

               Cow position:
               chr16:21188800-21189145 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 160
               

               Conread position:
               338-683
               

               Cow position:
               chr16:23876958-23876619 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 150
               

               Conread position:
               338-683
               

               Cow position:
               chr16:24622129-24621787 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 60
               

               Conread position:
               338-683
               

               Cow position:
               chr16:26652185-26652530 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 150
               

               Conread position:
               338-683
               

               Cow position:
               chr16:27595088-27595429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 131
               

               Conread position:
               338-683
               

               Cow position:
               chr16:42131018-42131357 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               240
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               27, 20
               

               Conread position:
               338-683
               

               Cow position:
               chr16:47787524-47787869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 160
               

               Conread position:
               338-683
               

               Cow position:
               chr16:53446205-53445860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 160
               

               Conread position:
               338-684
               

               Cow position:
               chr16:624947-625283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 74
               

               Conread position:
               338-684
               

               Cow position:
               chr16:838855-839195 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 83
               

               Conread position:
               338-684
               

               Cow position:
               chr16:1433757-1434108 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 151
               

               Conread position:
               338-684
               

               Cow position:
               chr16:1566102-1565765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 109
               

               Conread position:
               338-684
               

               Cow position:
               chr16:1862019-1862355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 43
               

               Conread position:
               338-684
               

               Cow position:
               chr16:2409322-2408983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 59
               

               Conread position:
               338-684
               

               Cow position:
               chr16:2725653-2725308 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 104
               

               Conread position:
               338-684
               

               Cow position:
               chr16:3031930-3031590 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 84
               

               Conread position:
               338-684
               

               Cow position:
               chr16:3144823-3144487 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 104
               

               Conread position:
               338-684
               

               Cow position:
               chr16:3331483-3331821 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 109
               

               Conread position:
               338-684
               

               Cow position:
               chr16:3770443-3770099 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 104
               

               Conread position:
               338-684
               

               Cow position:
               chr16:4425661-4426005 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               241
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               83, 110
               

               Conread position:
               338-684
               

               Cow position:
               chr16:4462777-4462414 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               258
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               83, 104
               

               Conread position:
               338-684
               

               Cow position:
               chr16:5487335-5487682 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 151
               

               Conread position:
               338-684
               

               Cow position:
               chr16:7466179-7466525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 160
               

               Conread position:
               338-684
               

               Cow position:
               chr16:7674893-7674547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 15
               

               Conread position:
               338-684
               

               Cow position:
               chr16:10374114-10373770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               206, 158
               

               Conread position:
               338-684
               

               Cow position:
               chr16:12536380-12536025 (view UCSC Genome Browser custom track)
               

               Alignm length:
               360
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 150
               

               Conread position:
               338-684
               

               Cow position:
               chr16:15186638-15186979 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 104
               

               Conread position:
               338-684
               

               Cow position:
               chr16:15980816-15980474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 122
               

               Conread position:
               338-684
               

               Cow position:
               chr16:18617561-18617226 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 115
               

               Conread position:
               338-684
               

               Cow position:
               chr16:20200698-20201033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               243
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               82, 156
               

               Conread position:
               338-684
               

               Cow position:
               chr16:20408597-20408265 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               241
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               78, 123
               

               Conread position:
               338-684
               

               Cow position:
               chr16:22800104-22799758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 150
               

               Conread position:
               338-684
               

               Cow position:
               chr16:23365341-23365000 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 16
               

               Conread position:
               338-684
               

               Cow position:
               chr16:23672178-23672524 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 160
               

               Conread position:
               338-684
               

               Cow position:
               chr16:24924355-24924700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               367
               

               Alignm identity:
               245
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               211, 42
               

               Conread position:
               338-684
               

               Cow position:
               chr16:25087183-25087521 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 46
               

               Conread position:
               338-684
               

               Cow position:
               chr16:25343542-25343888 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 154
               

               Conread position:
               338-684
               

               Cow position:
               chr16:25934726-25935065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               244
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               83, 40
               

               Conread position:
               338-684
               

               Cow position:
               chr16:26665297-26665628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               244
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               210, 20
               

               Conread position:
               338-684
               

               Cow position:
               chr16:26991382-26991036 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 130
               

               Conread position:
               338-684
               

               Cow position:
               chr16:27711580-27711260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               249
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               211, 66
               

               Conread position:
               338-684
               

               Cow position:
               chr16:27731813-27731470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 104
               

               Conread position:
               338-684
               

               Cow position:
               chr16:28023454-28023113 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               239
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               83, 162
               

               Conread position:
               338-684
               

               Cow position:
               chr16:28168752-28168406 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 149
               

               Conread position:
               338-684
               

               Cow position:
               chr16:28194734-28194388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 151
               

               Conread position:
               338-684
               

               Cow position:
               chr16:29035468-29035809 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 16
               

               Conread position:
               338-684
               

               Cow position:
               chr16:29048596-29048942 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 157
               

               Conread position:
               338-684
               

               Cow position:
               chr16:31587130-31586785 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 160
               

               Conread position:
               338-684
               

               Cow position:
               chr16:32325420-32325767 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 161
               

               Conread position:
               338-684
               

               Cow position:
               chr16:32836488-32836831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               84, 111
               

               Conread position:
               338-684
               

               Cow position:
               chr16:33923519-33923176 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               232
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               81, 15
               

               Conread position:
               338-684
               

               Cow position:
               chr16:34505265-34505609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 110
               

               Conread position:
               338-684
               

               Cow position:
               chr16:36240725-36241058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 110
               

               Conread position:
               338-684
               

               Cow position:
               chr16:37479285-37478949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               242
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               83, 160
               

               Conread position:
               338-684
               

               Cow position:
               chr16:39035132-39034791 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 108
               

               Conread position:
               338-684
               

               Cow position:
               chr16:40294596-40294259 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 16
               

               Conread position:
               338-684
               

               Cow position:
               chr16:41032869-41033215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 149
               

               Conread position:
               338-684
               

               Cow position:
               chr16:41161898-41161558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               264
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 151
               

               Conread position:
               338-684
               

               Cow position:
               chr16:41572964-41573324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 251
               

               Conread position:
               338-684
               

               Cow position:
               chr16:42162314-42162655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 150
               

               Conread position:
               338-684
               

               Cow position:
               chr16:43895694-43895351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 109
               

               Conread position:
               338-684
               

               Cow position:
               chr16:46521483-46521138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 16
               

               Conread position:
               338-684
               

               Cow position:
               chr16:47402952-47403295 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 109
               

               Conread position:
               338-684
               

               Cow position:
               chr16:52525800-52526143 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 104
               

               Conread position:
               338-684
               

               Cow position:
               chr16:54323754-54323408 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 16
               

               Conread position:
               341-488
               

               Cow position:
               chr16:23064947-23064799 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               75, 105
               

               Conread position:
               341-568
               

               Cow position:
               chr16:10770453-10770675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               204, 82
               

               Conread position:
               341-663
               

               Cow position:
               chr16:28435567-28435245 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 156
               

               Conread position:
               341-673
               

               Cow position:
               chr16:5633724-5633412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               238
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               183, 62
               

               Conread position:
               341-673
               

               Cow position:
               chr16:24811529-24811859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               80, 41
               

               Conread position:
               341-682
               

               Cow position:
               chr16:2237199-2236860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 119
               

               Conread position:
               341-683
               

               Cow position:
               chr16:20203571-20203911 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               23, 89
               

               Conread position:
               341-684
               

               Cow position:
               chr16:42058555-42058905 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               225
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               50, 332
               

               Conread position:
               341-684
               

               Cow position:
               chr16:45800345-45800677 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               222
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               255, 43
               

               Conread position:
               341-684
               

               Cow position:
               chr16:49743858-49743519 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 106
               

               Conread position:
               342-545
               

               Cow position:
               chr16:818284-818484 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               79, 151
               

               Conread position:
               342-683
               

               Cow position:
               chr16:45705220-45704881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               178, 154
               

               Conread position:
               342-684
               

               Cow position:
               chr16:20642079-20642419 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 146
               

               Conread position:
               343-683
               

               Cow position:
               chr16:24406487-24406826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               344
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 148
               

               Conread position:
               344-670
               

               Cow position:
               chr16:26653252-26653574 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 149
               

               Conread position:
               345-684
               

               Cow position:
               chr16:5891589-5891917 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 84
               

               Conread position:
               347-639
               

               Cow position:
               chr16:38533731-38533428 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               9, 115
               

               Conread position:
               347-684
               

               Cow position:
               chr16:25172859-25173185 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               232
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               23, 70
               

               Conread position:
               347-684
               

               Cow position:
               chr16:34531886-34532214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               201, 68
               

               Conread position:
               350-603
               

               Cow position:
               chr16:5589956-5590198 (view UCSC Genome Browser custom track)
               

               Alignm length:
               255
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               70, 108
               

               Conread position:
               350-666
               

               Cow position:
               chr16:20635930-20635620 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               220
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               197, 65
               

               Conread position:
               352-684
               

               Cow position:
               chr16:52590124-52589800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               154, 71
               

               Conread position:
               355-572
               

               Cow position:
               chr16:21812110-21812327 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               66, 131
               

               Conread position:
               359-646
               

               Cow position:
               chr16:3348395-3348681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               210
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               57, 95
               

               Conread position:
               359-684
               

               Cow position:
               chr16:9024145-9024470 (view UCSC Genome Browser custom track)
               

               Alignm length:
               334
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               66, 23
               

               Conread position:
               359-684
               

               Cow position:
               chr16:18496152-18495833 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 75
               

               Conread position:
               360-626
               

               Cow position:
               chr16:14620669-14620412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               183
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               56, 94
               

               Conread position:
               360-669
               

               Cow position:
               chr16:52523906-52524215 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               225
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               62, 11
               

               Conread position:
               360-684
               

               Cow position:
               chr16:25455870-25455550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               65, 40
               

               Conread position:
               363-670
               

               Cow position:
               chr16:43693446-43693751 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               38, 44
               

               Conread position:
               363-684
               

               Cow position:
               chr16:3149430-3149119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 79
               

               Conread position:
               363-684
               

               Cow position:
               chr16:10439842-10440154 (view UCSC Genome Browser custom track)
               

               Alignm length:
               325
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 117
               

               Conread position:
               363-684
               

               Cow position:
               chr16:23097600-23097283 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 11
               

               Conread position:
               363-684
               

               Cow position:
               chr16:41165161-41164848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               195, 58
               

               Conread position:
               363-684
               

               Cow position:
               chr16:42746662-42746368 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               229
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               30, 66
               

               Conread position:
               364-684
               

               Cow position:
               chr16:36164364-36164675 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               57, 90
               

               Conread position:
               365-684
               

               Cow position:
               chr16:44128233-44127928 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               228
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               183, 34
               

               Conread position:
               365-684
               

               Cow position:
               chr16:46224958-46224642 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 99
               

               Conread position:
               366-684
               

               Cow position:
               chr16:23984904-23985222 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 132
               

               Conread position:
               366-684
               

               Cow position:
               chr16:34207490-34207800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               155, 54
               

               Conread position:
               367-668
               

               Cow position:
               chr16:43771104-43771388 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               216
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               30, 57
               

               Conread position:
               368-684
               

               Cow position:
               chr16:51402253-51401938 (view UCSC Genome Browser custom track)
               

               Alignm length:
               320
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 99
               

               Conread position:
               370-638
               

               Cow position:
               chr16:28374371-28374102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               272
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               51, 116
               

               Conread position:
               372-538
               

               Cow position:
               chr16:3346547-3346380 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               48, 126
               

               Conread position:
               372-684
               

               Cow position:
               chr16:3010442-3010747 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 75
               

               Conread position:
               373-684
               

               Cow position:
               chr16:42735024-42734716 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               229
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               48, 116
               

               Conread position:
               374-682
               

               Cow position:
               chr16:30050675-30050966 (view UCSC Genome Browser custom track)
               

               Alignm length:
               309
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               378-684
               

               Cow position:
               chr16:48103703-48104003 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               211, 106
               

               Conread position:
               384-671
               

               Cow position:
               chr16:5875963-5876243 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               211
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               41, 62
               

               Conread position:
               384-684
               

               Cow position:
               chr16:2481503-2481206 (view UCSC Genome Browser custom track)
               

               Alignm length:
               306
               

               Alignm identity:
               219
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               15, 60
               

               Conread position:
               384-684
               

               Cow position:
               chr16:5526490-5526194 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 102
               

               Conread position:
               393-569
               

               Cow position:
               chr16:14440280-14440450 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               28, 54
               

               Conread position:
               395-684
               

               Cow position:
               chr16:9417063-9416781 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 93
               

               Conread position:
               397-684
               

               Cow position:
               chr16:15411420-15411140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               215
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 50
               

               Conread position:
               400-684
               

               Cow position:
               chr16:4388364-4388648 (view UCSC Genome Browser custom track)
               

               Alignm length:
               289
               

               Alignm identity:
               220
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 89
               

               Conread position:
               404-684
               

               Cow position:
               chr16:37443885-37443608 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               224
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 84
               

               Conread position:
               412-670
               

               Cow position:
               chr16:46055689-46055941 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               190
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               135, 74
               

               Conread position:
               416-684
               

               Cow position:
               chr16:4847254-4846992 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               208
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 68
               

               Conread position:
               419-684
               

               Cow position:
               chr16:49220306-49220047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               190
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               121, 15
               

               Conread position:
               424-670
               

               Cow position:
               chr16:5762437-5762681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               248
               

               Alignm identity:
               186
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               123, 72
               

               Conread position:
               433-684
               

               Cow position:
               chr16:55866388-55866637 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               116, 61
               

               Conread position:
               447-684
               

               Cow position:
               chr16:11634475-11634242 (view UCSC Genome Browser custom track)
               

               Alignm length:
               239
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               101, 49
               

               Conread position:
               463-684
               

               Cow position:
               chr16:29157351-29157569 (view UCSC Genome Browser custom track)
               

               Alignm length:
               223
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               84, 33
               

               Conread position:
               464-673
               

               Cow position:
               chr16:10966515-10966313 (view UCSC Genome Browser custom track)
               

               Alignm length:
               211
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               85, 32
               

               Conread position:
               468-684
               

               Cow position:
               chr16:2303826-2304040 (view UCSC Genome Browser custom track)
               

               Alignm length:
               218
               

               Alignm identity:
               169
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               77, 28
               

               Conread position:
               470-683
               

               Cow position:
               chr16:5528889-5529100 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               76, 26
               

               Conread position:
               471-684
               

               Cow position:
               chr16:15811769-15811980 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               159
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               75, 25
               

               Conread position:
               481-684
               

               Cow position:
               chr16:23064290-23064085 (view UCSC Genome Browser custom track)
               

               Alignm length:
               207
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               9, 125
               

               Conread position:
               487-684
               

               Cow position:
               chr16:15569486-15569681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               199
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               58, 114
               

               Conread position:
               487-684
               

               Cow position:
               chr16:23800912-23800722 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               80, 23
               

               Conread position:
               496-666
               

               Cow position:
               chr16:17110996-17111166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               50, 14
               

               Conread position:
               497-684
               

               Cow position:
               chr16:50875085-50874901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               505-684
               

               Cow position:
               chr16:7297989-7298163 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               37, 0
               

               Conread position:
               505-684
               

               Cow position:
               chr16:49171346-49171170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               43, 0
               

               Conread position:
               512-683
               

               Cow position:
               chr16:26092155-26091983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               124
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               512-684
               

               Cow position:
               chr16:23562189-23562362 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               515-684
               

               Cow position:
               chr16:29089148-29088982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               172
               

               Alignm identity:
               126
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               32, 109
               

               Conread position:
               516-684
               

               Cow position:
               chr16:416643-416807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               32, 98
               

               Conread position:
               516-684
               

               Cow position:
               chr16:20969056-20968887 (view UCSC Genome Browser custom track)
               

               Alignm length:
               170
               

               Alignm identity:
               118
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               524-673
               

               Cow position:
               chr16:12161528-12161377 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               532-684
               

               Cow position:
               chr16:16538546-16538699 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               115
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               15, 0
               
Show alignments to all cow chromosomes.
Conread position:	310-682
Cow position:	chr16:2273600-2273972 (view UCSC Genome Browser custom track)
Alignm length:	377
Alignm identity:	267
Alignm E-value:	0
Alignm gaps (pig, cow):	13, 189
Conread position:	310-684
Cow position:	chr16:194364-193999 (view UCSC Genome Browser custom track)
Alignm length:	382
Alignm identity:	282
Alignm E-value:	0
Alignm gaps (pig, cow):	24, 87
Conread position:	321-621
Cow position:	chr16:55912213-55911907 (view UCSC Genome Browser custom track)
Alignm length:	312
Alignm identity:	210
Alignm E-value:	3e-29
Alignm gaps (pig, cow):	29, 10
Conread position:	331-683
Cow position:	chr16:41684730-41684381 (view UCSC Genome Browser custom track)
Alignm length:	357
Alignm identity:	273
Alignm E-value:	0
Alignm gaps (pig, cow):	7, 91
Conread position:	331-684
Cow position:	chr16:15494031-15494372 (view UCSC Genome Browser custom track)
Alignm length:	359
Alignm identity:	244
Alignm E-value:	7e-38
Alignm gaps (pig, cow):	22, 7
Conread position:	333-489
Cow position:	chr16:39365320-39365161 (view UCSC Genome Browser custom track)
Alignm length:	160
Alignm identity:	121
Alignm E-value:	2e-27
Alignm gaps (pig, cow):	13, 0
Conread position:	335-684
Cow position:	chr16:31424409-31424760 (view UCSC Genome Browser custom track)
Alignm length:	358
Alignm identity:	247
Alignm E-value:	5.60519e-45
Alignm gaps (pig, cow):	86, 153
Conread position:	336-684
Cow position:	chr16:30999801-31000140 (view UCSC Genome Browser custom track)
Alignm length:	353
Alignm identity:	245
Alignm E-value:	1.00053e-42
Alignm gaps (pig, cow):	44, 14
Conread position:	337-533
Cow position:	chr16:19343181-19342987 (view UCSC Genome Browser custom track)
Alignm length:	198
Alignm identity:	141
Alignm E-value:	7e-27
Alignm gaps (pig, cow):	86, 148
Conread position:	337-684
Cow position:	chr16:13434623-13434982 (view UCSC Genome Browser custom track)
Alignm length:	365
Alignm identity:	244
Alignm E-value:	4e-32
Alignm gaps (pig, cow):	24, 9
Conread position:	338-477
Cow position:	chr16:25259375-25259512 (view UCSC Genome Browser custom track)
Alignm length:	142
Alignm identity:	110
Alignm E-value:	1e-23
Alignm gaps (pig, cow):	82, 17
Conread position:	338-491
Cow position:	chr16:15568824-15568976 (view UCSC Genome Browser custom track)
Alignm length:	154
Alignm identity:	116
Alignm E-value:	7e-27
Alignm gaps (pig, cow):	77, 0
Conread position:	338-497
Cow position:	chr16:28469214-28469053 (view UCSC Genome Browser custom track)
Alignm length:	162
Alignm identity:	123
Alignm E-value:	3e-29
Alignm gaps (pig, cow):	83, 0
Conread position:	338-508
Cow position:	chr16:16538378-16538543 (view UCSC Genome Browser custom track)
Alignm length:	172
Alignm identity:	131
Alignm E-value:	8e-29
Alignm gaps (pig, cow):	82, 66
Conread position:	338-528
Cow position:	chr16:20192600-20192418 (view UCSC Genome Browser custom track)
Alignm length:	193
Alignm identity:	146
Alignm E-value:	9e-30
Alignm gaps (pig, cow):	83, 108
Conread position:	338-531
Cow position:	chr16:41822434-41822624 (view UCSC Genome Browser custom track)
Alignm length:	196
Alignm identity:	137
Alignm E-value:	1e-21
Alignm gaps (pig, cow):	83, 110
Conread position:	338-533
Cow position:	chr16:4799150-4798958 (view UCSC Genome Browser custom track)
Alignm length:	198
Alignm identity:	151
Alignm E-value:	2e-34
Alignm gaps (pig, cow):	82, 123
Conread position:	338-537
Cow position:	chr16:5663413-5663604 (view UCSC Genome Browser custom track)
Alignm length:	202
Alignm identity:	149
Alignm E-value:	2e-27
Alignm gaps (pig, cow):	81, 108
Conread position:	338-545
Cow position:	chr16:25443199-25443404 (view UCSC Genome Browser custom track)
Alignm length:	210
Alignm identity:	149
Alignm E-value:	7e-27
Alignm gaps (pig, cow):	83, 118
Conread position:	338-565
Cow position:	chr16:43845650-43845425 (view UCSC Genome Browser custom track)
Alignm length:	234
Alignm identity:	163
Alignm E-value:	2e-24
Alignm gaps (pig, cow):	73, 124