Cow genome map
| Conread name: | Ss1.1-mCP1-MI-P-CP1-nzc-k-01-0-UI.s1.3 |
| Conread position: | 133-606 |
| Cow position: | chr17:1704907-1704436 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 152 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 413, 353 |
| Conread position: | 272-684 |
| Cow position: | chr17:18124867-18124460 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 285 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 5, 166 |
| Conread position: | 333-639 |
| Cow position: | chr17:15720584-15720886 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 120 |
| Conread position: | 335-684 |
| Cow position: | chr17:4062466-4062809 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 108 |
| Conread position: | 338-453 |
| Cow position: | chr17:29302908-29303025 (view UCSC Genome Browser custom track) |
| Alignm length: | 118 |
| Alignm identity: | 93 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 338-481 |
| Cow position: | chr17:52726-52580 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 26, 15 |
| Conread position: | 338-481 |
| Cow position: | chr17:14935805-14935660 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 338-491 |
| Cow position: | chr17:22562041-22562192 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 83, 43 |
| Conread position: | 338-492 |
| Cow position: | chr17:14897095-14897250 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 78, 110 |
| Conread position: | 338-497 |
| Cow position: | chr17:8365734-8365902 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 338-497 |
| Cow position: | chr17:25463123-25463284 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 338-527 |
| Cow position: | chr17:19216574-19216388 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 83, 108 |
| Conread position: | 338-530 |
| Cow position: | chr17:43990640-43990827 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 338-554 |
| Cow position: | chr17:34574892-34575108 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 83, 150 |
| Conread position: | 338-577 |
| Cow position: | chr17:28026358-28026118 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 83, 150 |
| Conread position: | 338-612 |
| Cow position: | chr17:20404555-20404842 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 149, 81 |
| Conread position: | 338-631 |
| Cow position: | chr17:11085545-11085255 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 207 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 83, 109 |
| Conread position: | 338-632 |
| Cow position: | chr17:2554127-2553834 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 160 |
| Conread position: | 338-638 |
| Cow position: | chr17:3284013-3284305 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 210 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 83, 51 |
| Conread position: | 338-639 |
| Cow position: | chr17:2245911-2245614 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 228 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 20 |
| Conread position: | 338-648 |
| Cow position: | chr17:20079748-20079442 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 221 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 85, 58 |
| Conread position: | 338-660 |
| Cow position: | chr17:2032371-2032688 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 215 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 215, 81 |
| Conread position: | 338-668 |
| Cow position: | chr17:41011718-41012044 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 232 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 83, 155 |
| Conread position: | 338-670 |
| Cow position: | chr17:36815831-36816155 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 43 |
| Conread position: | 338-672 |
| Cow position: | chr17:10322109-10322427 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 230 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 338-672 |
| Cow position: | chr17:15649048-15649371 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 222 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 79, 15 |
| Conread position: | 338-672 |
| Cow position: | chr17:16897957-16897632 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 229 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 168, 84 |
| Conread position: | 338-672 |
| Cow position: | chr17:17257653-17257983 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 150 |
| Conread position: | 338-672 |
| Cow position: | chr17:20098171-20097850 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 20 |
| Conread position: | 338-673 |
| Cow position: | chr17:136774-137108 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 155 |
| Conread position: | 338-673 |
| Cow position: | chr17:1785866-1785546 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 238 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 82, 102 |
| Conread position: | 338-673 |
| Cow position: | chr17:1882403-1882735 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 149 |
| Conread position: | 338-673 |
| Cow position: | chr17:2176113-2176449 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 161 |
| Conread position: | 338-673 |
| Cow position: | chr17:21768977-21768645 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 109 |
| Conread position: | 338-673 |
| Cow position: | chr17:24310979-24311306 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 93, 121 |
| Conread position: | 338-674 |
| Cow position: | chr17:5999355-5999020 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 161 |
| Conread position: | 338-674 |
| Cow position: | chr17:21714130-21714452 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 108 |
| Conread position: | 338-675 |
| Cow position: | chr17:240423-240761 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 176 |
| Conread position: | 338-675 |
| Cow position: | chr17:3606584-3606245 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 17, 23 |
| Conread position: | 338-683 |
| Cow position: | chr17:1570252-1569911 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 109 |
| Conread position: | 338-683 |
| Cow position: | chr17:3742294-3742639 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 160 |
| Conread position: | 338-683 |
| Cow position: | chr17:5307605-5307260 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 150 |
| Conread position: | 338-683 |
| Cow position: | chr17:8210788-8211131 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 109 |
| Conread position: | 338-683 |
| Cow position: | chr17:11785027-11785356 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 244 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 83, 131 |
| Conread position: | 338-683 |
| Cow position: | chr17:13418534-13418879 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 160 |
| Conread position: | 338-683 |
| Cow position: | chr17:15709859-15709514 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 160 |
| Conread position: | 338-683 |
| Cow position: | chr17:19979991-19979651 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 109 |
| Conread position: | 338-684 |
| Cow position: | chr17:147061-147410 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 120 |
| Conread position: | 338-684 |
| Cow position: | chr17:252956-253299 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 107 |
| Conread position: | 338-684 |
| Cow position: | chr17:451969-452312 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 109 |
| Conread position: | 338-684 |
| Cow position: | chr17:2005237-2005559 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 250 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 78, 147 |
| Conread position: | 338-684 |
| Cow position: | chr17:2264323-2264665 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 50 |
| Conread position: | 338-684 |
| Cow position: | chr17:4084160-4084493 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 284, 81 |
| Conread position: | 338-684 |
| Cow position: | chr17:6070677-6071012 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 54 |
| Conread position: | 338-684 |
| Cow position: | chr17:6261996-6262340 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 109 |
| Conread position: | 338-684 |
| Cow position: | chr17:7561823-7561479 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 137 |
| Conread position: | 338-684 |
| Cow position: | chr17:8204067-8204406 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 44 |
| Conread position: | 338-684 |
| Cow position: | chr17:11381057-11380710 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 16 |
| Conread position: | 338-684 |
| Cow position: | chr17:13930025-13930370 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 150 |
| Conread position: | 338-684 |
| Cow position: | chr17:14214903-14214557 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 150 |
| Conread position: | 338-684 |
| Cow position: | chr17:14241950-14242304 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 168 |
| Conread position: | 338-684 |
| Cow position: | chr17:14294411-14294069 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 227 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 79, 127 |
| Conread position: | 338-684 |
| Cow position: | chr17:15141199-15140866 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 108 |
| Conread position: | 338-684 |
| Cow position: | chr17:15437929-15438275 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 160 |
| Conread position: | 338-684 |
| Cow position: | chr17:15808104-15808451 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 161 |
| Conread position: | 338-684 |
| Cow position: | chr17:16855967-16855618 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 15 |
| Conread position: | 338-684 |
| Cow position: | chr17:16903020-16903362 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 220, 85 |
| Conread position: | 338-684 |
| Cow position: | chr17:20085635-20085299 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 85 |
| Conread position: | 338-684 |
| Cow position: | chr17:21420085-21420426 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 85 |
| Conread position: | 338-684 |
| Cow position: | chr17:22107512-22107166 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 20 |
| Conread position: | 338-684 |
| Cow position: | chr17:23322293-23321951 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 131 |
| Conread position: | 338-684 |
| Cow position: | chr17:24027854-24027517 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 239 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 338-684 |
| Cow position: | chr17:24784306-24784646 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 127 |
| Conread position: | 338-684 |
| Cow position: | chr17:25738431-25738777 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 158 |
| Conread position: | 338-684 |
| Cow position: | chr17:29825831-29825491 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 150 |
| Conread position: | 338-684 |
| Cow position: | chr17:38828042-38828393 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 251 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 83, 153 |
| Conread position: | 338-684 |
| Cow position: | chr17:41411984-41412315 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 126 |
| Conread position: | 338-684 |
| Cow position: | chr17:43146441-43146093 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 148 |
| Conread position: | 339-670 |
| Cow position: | chr17:13690268-13689937 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 159 |
| Conread position: | 339-684 |
| Cow position: | chr17:15852842-15853200 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 107 |
| Conread position: | 341-641 |
| Cow position: | chr17:33283197-33282905 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 213 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 231, 74 |
| Conread position: | 341-642 |
| Cow position: | chr17:4782208-4781908 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 218 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 158 |
| Conread position: | 341-651 |
| Cow position: | chr17:4162312-4161990 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 212 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 30, 13 |
| Conread position: | 341-664 |
| Cow position: | chr17:1563375-1563693 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 227 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 92, 117 |
| Conread position: | 341-684 |
| Cow position: | chr17:14233472-14233128 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 32 |
| Conread position: | 341-684 |
| Cow position: | chr17:20490457-20490790 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 124 |
| Conread position: | 343-659 |
| Cow position: | chr17:2170547-2170855 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 227 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 76, 145 |
| Conread position: | 344-626 |
| Cow position: | chr17:8496791-8496518 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 201 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 73, 121 |
| Conread position: | 344-684 |
| Cow position: | chr17:1705539-1705877 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 141 |
| Conread position: | 345-684 |
| Cow position: | chr17:3203207-3202874 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 74, 120 |
| Conread position: | 349-683 |
| Cow position: | chr17:5045059-5044739 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 235 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 199, 79 |
| Conread position: | 353-675 |
| Cow position: | chr17:37459543-37459854 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 217 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 11, 34 |
| Conread position: | 355-682 |
| Cow position: | chr17:34566941-34567272 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 222 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 87, 27 |
| Conread position: | 359-639 |
| Cow position: | chr17:14306172-14305902 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 192 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 62, 124 |
| Conread position: | 359-651 |
| Cow position: | chr17:4210169-4210459 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 216 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 26, 102 |
| Conread position: | 359-684 |
| Cow position: | chr17:1458542-1458871 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 38 |
| Conread position: | 362-527 |
| Cow position: | chr17:22253797-22253638 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 130 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 59, 85 |
| Conread position: | 362-684 |
| Cow position: | chr17:17530314-17530655 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 233 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 9, 165 |
| Conread position: | 363-684 |
| Cow position: | chr17:10842442-10842745 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 232 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 363-684 |
| Cow position: | chr17:15327445-15327758 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 84 |
| Conread position: | 364-684 |
| Cow position: | chr17:1655589-1655274 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 59 |
| Conread position: | 366-684 |
| Cow position: | chr17:6080676-6080985 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 54, 94 |
| Conread position: | 367-683 |
| Cow position: | chr17:9751963-9752269 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 230 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 54, 91 |
| Conread position: | 367-684 |
| Cow position: | chr17:29822555-29822250 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 66, 92 |
| Conread position: | 370-683 |
| Cow position: | chr17:40468-40781 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 128 |
| Conread position: | 388-684 |
| Cow position: | chr17:732305-732013 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 223 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 33, 60 |
| Conread position: | 389-668 |
| Cow position: | chr17:18590612-18590888 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 198 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 26, 93 |
| Conread position: | 389-684 |
| Cow position: | chr17:27792593-27792303 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 227 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 58 |
| Conread position: | 390-682 |
| Cow position: | chr17:19233991-19234272 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 211 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 64, 97 |
| Conread position: | 392-684 |
| Cow position: | chr17:14030661-14030368 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 218 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 18, 82 |
| Conread position: | 395-684 |
| Cow position: | chr17:20232936-20233225 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 213 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 28, 56 |
| Conread position: | 398-545 |
| Cow position: | chr17:15449958-15450100 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 27, 55 |
| Conread position: | 398-626 |
| Cow position: | chr17:37455136-37454909 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 177 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 23, 90 |
| Conread position: | 405-684 |
| Cow position: | chr17:29130633-29130356 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 5, 83 |
| Conread position: | 407-682 |
| Cow position: | chr17:23721810-23722071 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 5, 78 |
| Conread position: | 410-674 |
| Cow position: | chr17:39950861-39950597 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 204 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 78 |
| Conread position: | 411-684 |
| Cow position: | chr17:16446193-16445928 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 216, 23 |
| Conread position: | 412-683 |
| Cow position: | chr17:14393871-14394138 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 187 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 14, 75 |
| Conread position: | 412-684 |
| Cow position: | chr17:18100872-18100604 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 197 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 136, 51 |
| Conread position: | 414-630 |
| Cow position: | chr17:146208-145994 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 131, 72 |
| Conread position: | 415-684 |
| Cow position: | chr17:4569471-4569730 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 192 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 133, 45 |
| Conread position: | 419-684 |
| Cow position: | chr17:38617290-38617551 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 129, 25 |
| Conread position: | 423-684 |
| Cow position: | chr17:11188567-11188822 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 125, 66 |
| Conread position: | 424-684 |
| Cow position: | chr17:17127189-17127447 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 192 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 124, 72 |
| Conread position: | 436-653 |
| Cow position: | chr17:33290740-33290520 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 111, 69 |
| Conread position: | 442-684 |
| Cow position: | chr17:41812469-41812698 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 446-683 |
| Cow position: | chr17:16119987-16119755 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 101, 50 |
| Conread position: | 457-627 |
| Cow position: | chr17:30900742-30900575 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 32, 54 |
| Conread position: | 486-684 |
| Cow position: | chr17:4297200-4297385 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 12, 25 |
| Conread position: | 487-684 |
| Cow position: | chr17:14251027-14250826 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 140 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 90, 27 |
| Conread position: | 487-684 |
| Cow position: | chr17:22562428-22562625 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 153 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 60, 25 |
| Conread position: | 496-663 |
| Cow position: | chr17:18197161-18197328 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 38, 14 |
| Conread position: | 496-670 |
| Cow position: | chr17:51906-51734 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 50, 16 |
| Conread position: | 507-680 |
| Cow position: | chr17:20694501-20694672 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 131 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 7, 33 |
| Conread position: | 509-682 |
| Cow position: | chr17:19216119-19215946 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 37, 8 |
| Conread position: | 521-684 |
| Cow position: | chr17:24291952-24292112 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 26, 97 |
Show alignments to all cow chromosomes.