Cow genome map
| Conread name: | Ss1.1-mCP1-MI-P-CP1-nzc-k-01-0-UI.s1.3 |
| Conread position: | 331-620 |
| Cow position: | chr18:16363965-16363680 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 202 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 29, 5 |
| Conread position: | 334-683 |
| Cow position: | chr18:51696639-51696988 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 88, 165 |
| Conread position: | 337-684 |
| Cow position: | chr18:35295524-35295874 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 151 |
| Conread position: | 338-482 |
| Cow position: | chr18:37664751-37664896 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 338-527 |
| Cow position: | chr18:47743845-47744033 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 83, 160 |
| Conread position: | 338-531 |
| Cow position: | chr18:28767152-28767344 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 83, 150 |
| Conread position: | 338-567 |
| Cow position: | chr18:22480860-22481087 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 82, 161 |
| Conread position: | 338-577 |
| Cow position: | chr18:19457215-19457458 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 82, 154 |
| Conread position: | 338-586 |
| Cow position: | chr18:9661069-9661313 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 184 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 209, 91 |
| Conread position: | 338-592 |
| Cow position: | chr18:25941253-25941507 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 189 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 82, 150 |
| Conread position: | 338-597 |
| Cow position: | chr18:54168531-54168273 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 194 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 83, 61 |
| Conread position: | 338-603 |
| Cow position: | chr18:23441480-23441212 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 87, 147 |
| Conread position: | 338-607 |
| Cow position: | chr18:43128746-43129019 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 200 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 74, 166 |
| Conread position: | 338-627 |
| Cow position: | chr18:27538768-27539054 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 211 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 69, 110 |
| Conread position: | 338-631 |
| Cow position: | chr18:29239454-29239742 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 108 |
| Conread position: | 338-631 |
| Cow position: | chr18:40483359-40483648 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 212 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 83, 104 |
| Conread position: | 338-631 |
| Cow position: | chr18:54107496-54107775 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 194 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 338-636 |
| Cow position: | chr18:14814591-14814885 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 201 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 26, 15 |
| Conread position: | 338-638 |
| Cow position: | chr18:1046707-1046998 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 213 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 78, 160 |
| Conread position: | 338-639 |
| Cow position: | chr18:46875042-46874757 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 206 |
| Alignm E-value: | 9e-30 |
| Alignm gaps (pig, cow): | 91, 152 |
| Conread position: | 338-644 |
| Cow position: | chr18:32656040-32656345 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 190 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 83, 150 |
| Conread position: | 338-663 |
| Cow position: | chr18:20691826-20691516 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 214 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 224, 45 |
| Conread position: | 338-668 |
| Cow position: | chr18:16136315-16135971 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 239 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 82, 16 |
| Conread position: | 338-668 |
| Cow position: | chr18:29120390-29120703 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 242 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 78, 110 |
| Conread position: | 338-669 |
| Cow position: | chr18:37156394-37156062 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 64, 154 |
| Conread position: | 338-671 |
| Cow position: | chr18:14128927-14128605 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 232 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 210, 20 |
| Conread position: | 338-671 |
| Cow position: | chr18:21529878-21530208 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 109 |
| Conread position: | 338-673 |
| Cow position: | chr18:23702731-23702398 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 105 |
| Conread position: | 338-673 |
| Cow position: | chr18:54026158-54026485 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 32 |
| Conread position: | 338-674 |
| Cow position: | chr18:19269837-19270183 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 231 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 84, 108 |
| Conread position: | 338-674 |
| Cow position: | chr18:35290910-35291237 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 172, 97 |
| Conread position: | 338-675 |
| Cow position: | chr18:40158679-40159010 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 109 |
| Conread position: | 338-676 |
| Cow position: | chr18:16360630-16360300 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 234 |
| Alignm E-value: | 3.9937e-43 |
| Alignm gaps (pig, cow): | 142, 52 |
| Conread position: | 338-682 |
| Cow position: | chr18:19404146-19403813 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 232 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 83, 44 |
| Conread position: | 338-682 |
| Cow position: | chr18:40080329-40080003 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 232 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 83, 148 |
| Conread position: | 338-683 |
| Cow position: | chr18:604103-603770 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 85 |
| Conread position: | 338-683 |
| Cow position: | chr18:1956819-1956474 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 160 |
| Conread position: | 338-683 |
| Cow position: | chr18:3755294-3755639 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 160 |
| Conread position: | 338-683 |
| Cow position: | chr18:4979446-4979107 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 244 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 80, 132 |
| Conread position: | 338-683 |
| Cow position: | chr18:22183172-22182834 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 109 |
| Conread position: | 338-683 |
| Cow position: | chr18:30762608-30762263 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 150 |
| Conread position: | 338-683 |
| Cow position: | chr18:32437752-32437408 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 150 |
| Conread position: | 338-683 |
| Cow position: | chr18:37701139-37700799 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 160 |
| Conread position: | 338-683 |
| Cow position: | chr18:55417077-55417419 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 109 |
| Conread position: | 338-684 |
| Cow position: | chr18:11272493-11272150 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 85 |
| Conread position: | 338-684 |
| Cow position: | chr18:12994354-12994696 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 240 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 82, 60 |
| Conread position: | 338-684 |
| Cow position: | chr18:14418323-14418672 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 96, 163 |
| Conread position: | 338-684 |
| Cow position: | chr18:16080875-16081221 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 150 |
| Conread position: | 338-684 |
| Cow position: | chr18:16092168-16092514 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 160 |
| Conread position: | 338-684 |
| Cow position: | chr18:16464504-16464171 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 15 |
| Conread position: | 338-684 |
| Cow position: | chr18:17322757-17323098 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 20 |
| Conread position: | 338-684 |
| Cow position: | chr18:18476448-18476105 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 232 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 78, 149 |
| Conread position: | 338-684 |
| Cow position: | chr18:23801375-23801718 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 145 |
| Conread position: | 338-684 |
| Cow position: | chr18:25353601-25353944 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 109 |
| Conread position: | 338-684 |
| Cow position: | chr18:26244225-26243882 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 104 |
| Conread position: | 338-684 |
| Cow position: | chr18:27167979-27168330 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 153 |
| Conread position: | 338-684 |
| Cow position: | chr18:28929234-28928895 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 13 |
| Conread position: | 338-684 |
| Cow position: | chr18:28969934-28969591 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 104 |
| Conread position: | 338-684 |
| Cow position: | chr18:29864255-29863910 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 142 |
| Conread position: | 338-684 |
| Cow position: | chr18:32165575-32165237 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 124 |
| Conread position: | 338-684 |
| Cow position: | chr18:32770099-32770437 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 104 |
| Conread position: | 338-684 |
| Cow position: | chr18:36115087-36114752 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 240 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 88, 104 |
| Conread position: | 338-684 |
| Cow position: | chr18:36510973-36511316 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 109 |
| Conread position: | 338-684 |
| Cow position: | chr18:36775626-36775971 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 150 |
| Conread position: | 338-684 |
| Cow position: | chr18:37491177-37491506 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 238 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 78, 28 |
| Conread position: | 338-684 |
| Cow position: | chr18:37508318-37508660 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 160 |
| Conread position: | 338-684 |
| Cow position: | chr18:38090995-38090661 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 248 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 75, 141 |
| Conread position: | 338-684 |
| Cow position: | chr18:40343921-40343582 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 132 |
| Conread position: | 338-684 |
| Cow position: | chr18:51273748-51273417 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 127 |
| Conread position: | 338-684 |
| Cow position: | chr18:51344461-51344800 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 95 |
| Conread position: | 338-684 |
| Cow position: | chr18:51460488-51460150 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 109 |
| Conread position: | 338-684 |
| Cow position: | chr18:51483947-51484293 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 158 |
| Conread position: | 338-684 |
| Cow position: | chr18:51662499-51662845 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 160 |
| Conread position: | 338-684 |
| Cow position: | chr18:52630894-52630563 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 124 |
| Conread position: | 338-684 |
| Cow position: | chr18:52655167-52655507 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 104 |
| Conread position: | 338-684 |
| Cow position: | chr18:56484320-56483982 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 341-675 |
| Cow position: | chr18:4948300-4948648 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 246 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 46, 107 |
| Conread position: | 341-675 |
| Cow position: | chr18:44023845-44024176 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 79, 101 |
| Conread position: | 341-684 |
| Cow position: | chr18:9356523-9356182 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 123 |
| Conread position: | 341-684 |
| Cow position: | chr18:15171234-15171573 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 235 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 206, 75 |
| Conread position: | 341-684 |
| Cow position: | chr18:36647526-36647868 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 146 |
| Conread position: | 341-684 |
| Cow position: | chr18:37676885-37677223 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 55 |
| Conread position: | 342-518 |
| Cow position: | chr18:39813275-39813097 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 22, 13 |
| Conread position: | 342-682 |
| Cow position: | chr18:16150877-16151206 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 225 |
| Alignm E-value: | 7e-28 |
| Alignm gaps (pig, cow): | 78, 117 |
| Conread position: | 347-675 |
| Cow position: | chr18:33344486-33344805 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 73, 84 |
| Conread position: | 354-676 |
| Cow position: | chr18:44181608-44181298 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 38, 46 |
| Conread position: | 359-682 |
| Cow position: | chr18:14422639-14422966 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 212 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 53, 129 |
| Conread position: | 362-661 |
| Cow position: | chr18:54272806-54273088 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 61 |
| Conread position: | 363-491 |
| Cow position: | chr18:56035765-56035895 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 103 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 363-538 |
| Cow position: | chr18:33987835-33988009 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 58, 125 |
| Conread position: | 363-545 |
| Cow position: | chr18:14132770-14132951 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 58, 133 |
| Conread position: | 363-633 |
| Cow position: | chr18:29222748-29223012 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 200 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 192, 31 |
| Conread position: | 363-672 |
| Cow position: | chr18:33144035-33144338 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 58, 109 |
| Conread position: | 363-673 |
| Cow position: | chr18:5535369-5535673 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 125 |
| Conread position: | 363-673 |
| Cow position: | chr18:25922767-25923077 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 135 |
| Conread position: | 363-684 |
| Cow position: | chr18:17095185-17095506 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 238 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 44, 133 |
| Conread position: | 363-684 |
| Cow position: | chr18:19354738-19355057 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 125 |
| Conread position: | 363-684 |
| Cow position: | chr18:33101701-33102015 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 123 |
| Conread position: | 363-684 |
| Cow position: | chr18:36209974-36209659 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 226 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 164, 121 |
| Conread position: | 363-684 |
| Cow position: | chr18:55056463-55056770 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 48, 91 |
| Conread position: | 364-652 |
| Cow position: | chr18:16558082-16558367 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 207 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 55, 8 |
| Conread position: | 364-672 |
| Cow position: | chr18:45399545-45399840 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 209 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 57, 124 |
| Conread position: | 364-682 |
| Cow position: | chr18:27835708-27835391 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 103 |
| Conread position: | 364-684 |
| Cow position: | chr18:5077689-5077366 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 235 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 57, 134 |
| Conread position: | 366-636 |
| Cow position: | chr18:32725915-32725652 (view UCSC Genome Browser custom track) |
| Alignm length: | 274 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 55, 96 |
| Conread position: | 366-666 |
| Cow position: | chr18:2364063-2363774 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 197 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 35, 43 |
| Conread position: | 367-684 |
| Cow position: | chr18:54032089-54032406 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 82 |
| Conread position: | 369-684 |
| Cow position: | chr18:38160477-38160163 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 9 |
| Conread position: | 373-683 |
| Cow position: | chr18:5201911-5202221 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 116 |
| Conread position: | 377-683 |
| Cow position: | chr18:18215897-18216203 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 44, 121 |
| Conread position: | 378-684 |
| Cow position: | chr18:16174214-16173915 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 69 |
| Conread position: | 387-609 |
| Cow position: | chr18:36846071-36846294 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 33, 98 |
| Conread position: | 388-684 |
| Cow position: | chr18:28083454-28083750 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 84 |
| Conread position: | 389-676 |
| Cow position: | chr18:48390351-48390632 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 206 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 32, 65 |
| Conread position: | 394-684 |
| Cow position: | chr18:33521622-33521910 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 217 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 53 |
| Conread position: | 395-682 |
| Cow position: | chr18:44403228-44403517 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 197 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 25, 56 |
| Conread position: | 411-684 |
| Cow position: | chr18:35372422-35372153 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 10, 84 |
| Conread position: | 417-675 |
| Cow position: | chr18:18853631-18853879 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 179 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 94, 67 |
| Conread position: | 419-684 |
| Cow position: | chr18:47711561-47711821 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 25 |
| Conread position: | 420-683 |
| Cow position: | chr18:10221464-10221724 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 126, 66 |
| Conread position: | 446-683 |
| Cow position: | chr18:24618890-24619121 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 100, 50 |
| Conread position: | 448-684 |
| Cow position: | chr18:17671465-17671236 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 180 |
| Alignm E-value: | 3.99931e-42 |
| Alignm gaps (pig, cow): | 100, 16 |
| Conread position: | 453-684 |
| Cow position: | chr18:54066575-54066355 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 179, 7 |
| Conread position: | 467-684 |
| Cow position: | chr18:22411872-22412090 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 162, 23 |
| Conread position: | 486-684 |
| Cow position: | chr18:24452306-24452496 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 62, 24 |
| Conread position: | 486-684 |
| Cow position: | chr18:55649267-55649463 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 11, 25 |
| Conread position: | 497-683 |
| Cow position: | chr18:29070936-29071122 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 49, 13 |
| Conread position: | 498-683 |
| Cow position: | chr18:34015269-34015455 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 513-684 |
| Cow position: | chr18:47744274-47744446 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 515-684 |
| Cow position: | chr18:8883675-8883838 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 124 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 33, 86 |
| Conread position: | 522-672 |
| Cow position: | chr18:35056619-35056767 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 25, 65 |
| Conread position: | 527-682 |
| Cow position: | chr18:969229-969387 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 548-683 |
| Cow position: | chr18:36253127-36252995 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 103 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
Show alignments to all cow chromosomes.