Non-Coding RNA Search

Cow genome map


           Conread name:
           Ss1.1-mCP1-MI-P-CP1-nzc-k-01-0-UI.s1.3
        

               Conread position:
               277-684
               

               Cow position:
               chr2:36982387-36982797 (view UCSC Genome Browser custom track)
               

               Alignm length:
               417
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 171
               

               Conread position:
               286-684
               

               Cow position:
               chr2:46183793-46183390 (view UCSC Genome Browser custom track)
               

               Alignm length:
               409
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               18, 63
               

               Conread position:
               310-684
               

               Cow position:
               chr2:12594743-12595119 (view UCSC Genome Browser custom track)
               

               Alignm length:
               382
               

               Alignm identity:
               274
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 193
               

               Conread position:
               329-545
               

               Cow position:
               chr2:28612296-28612084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               162
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               9, 57
               

               Conread position:
               333-639
               

               Cow position:
               chr2:6066218-6065922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               310
               

               Alignm identity:
               215
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               214, 44
               

               Conread position:
               334-682
               

               Cow position:
               chr2:906056-906395 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 12
               

               Conread position:
               335-567
               

               Cow position:
               chr2:8747349-8747117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               236
               

               Alignm identity:
               178
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               7, 153
               

               Conread position:
               335-626
               

               Cow position:
               chr2:1434056-1433760 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               210
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               335-674
               

               Cow position:
               chr2:28639085-28638758 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               212, 91
               

               Conread position:
               336-684
               

               Cow position:
               chr2:11694231-11694573 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               236
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               211, 92
               

               Conread position:
               337-528
               

               Cow position:
               chr2:11157325-11157138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               194
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               84, 110
               

               Conread position:
               337-627
               

               Cow position:
               chr2:11688219-11688503 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               190
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               221, 84
               

               Conread position:
               337-672
               

               Cow position:
               chr2:26908543-26908879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               242
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               84, 132
               

               Conread position:
               337-684
               

               Cow position:
               chr2:32433531-32433184 (view UCSC Genome Browser custom track)
               

               Alignm length:
               359
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 58
               

               Conread position:
               338-486
               

               Cow position:
               chr2:16303121-16303261 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               338-491
               

               Cow position:
               chr2:280892-280737 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               26, 16
               

               Conread position:
               338-491
               

               Cow position:
               chr2:34562577-34562425 (view UCSC Genome Browser custom track)
               

               Alignm length:
               156
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               72, 104
               

               Conread position:
               338-491
               

               Cow position:
               chr2:34579864-34579718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               154
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               338-497
               

               Cow position:
               chr2:34500616-34500455 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               124
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               338-497
               

               Cow position:
               chr2:58473866-58473711 (view UCSC Genome Browser custom track)
               

               Alignm length:
               161
               

               Alignm identity:
               121
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               94, 69
               

               Conread position:
               338-501
               

               Cow position:
               chr2:32640743-32640910 (view UCSC Genome Browser custom track)
               

               Alignm length:
               168
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               338-503
               

               Cow position:
               chr2:11719590-11719754 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               98, 146
               

               Conread position:
               338-507
               

               Cow position:
               chr2:18063718-18063547 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               126
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               80, 161
               

               Conread position:
               338-521
               

               Cow position:
               chr2:363266-363083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               137
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               83, 150
               

               Conread position:
               338-522
               

               Cow position:
               chr2:81258979-81259158 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               338-524
               

               Cow position:
               chr2:45966231-45966052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               178, 65
               

               Conread position:
               338-527
               

               Cow position:
               chr2:47601471-47601286 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               137
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               82, 105
               

               Conread position:
               338-533
               

               Cow position:
               chr2:5902789-5902602 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               98, 85
               

               Conread position:
               338-536
               

               Cow position:
               chr2:62728620-62728810 (view UCSC Genome Browser custom track)
               

               Alignm length:
               201
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               79, 22
               

               Conread position:
               338-537
               

               Cow position:
               chr2:6640607-6640805 (view UCSC Genome Browser custom track)
               

               Alignm length:
               202
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               83, 150
               

               Conread position:
               338-543
               

               Cow position:
               chr2:74492834-74492634 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               26, 15
               

               Conread position:
               338-544
               

               Cow position:
               chr2:16023282-16023087 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               26, 16
               

               Conread position:
               338-544
               

               Cow position:
               chr2:26903976-26903774 (view UCSC Genome Browser custom track)
               

               Alignm length:
               209
               

               Alignm identity:
               157
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               83, 109
               

               Conread position:
               338-545
               

               Cow position:
               chr2:60674024-60673818 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               83, 150
               

               Conread position:
               338-562
               

               Cow position:
               chr2:8085704-8085924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               227
               

               Alignm identity:
               173
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               83, 151
               

               Conread position:
               338-572
               

               Cow position:
               chr2:28652312-28652083 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               80, 108
               

               Conread position:
               338-583
               

               Cow position:
               chr2:66596835-66597080 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               188
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               85, 150
               

               Conread position:
               338-584
               

               Cow position:
               chr2:62677352-62677093 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               88, 161
               

               Conread position:
               338-603
               

               Cow position:
               chr2:72021777-72022031 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               82, 15
               

               Conread position:
               338-606
               

               Cow position:
               chr2:72689404-72689673 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               83, 109
               

               Conread position:
               338-614
               

               Cow position:
               chr2:4385212-4385479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               195
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               80, 151
               

               Conread position:
               338-620
               

               Cow position:
               chr2:20896513-20896253 (view UCSC Genome Browser custom track)
               

               Alignm length:
               284
               

               Alignm identity:
               203
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               209, 78
               

               Conread position:
               338-621
               

               Cow position:
               chr2:50325016-50325289 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               209, 55
               

               Conread position:
               338-623
               

               Cow position:
               chr2:11731681-11731968 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               209
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               83, 162
               

               Conread position:
               338-627
               

               Cow position:
               chr2:25027503-25027214 (view UCSC Genome Browser custom track)
               

               Alignm length:
               296
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 152
               

               Conread position:
               338-630
               

               Cow position:
               chr2:50405798-50406081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               294
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               207, 61
               

               Conread position:
               338-632
               

               Cow position:
               chr2:52064558-52064848 (view UCSC Genome Browser custom track)
               

               Alignm length:
               298
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 148
               

               Conread position:
               338-636
               

               Cow position:
               chr2:10263612-10263319 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               214
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               30, 16
               

               Conread position:
               338-636
               

               Cow position:
               chr2:25757179-25756881 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               212
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               82, 22
               

               Conread position:
               338-658
               

               Cow position:
               chr2:31487189-31487486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               226
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               210, 17
               

               Conread position:
               338-660
               

               Cow position:
               chr2:11704413-11704718 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               228
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               83, 102
               

               Conread position:
               338-661
               

               Cow position:
               chr2:65936424-65936101 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 160
               

               Conread position:
               338-662
               

               Cow position:
               chr2:56800638-56800325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               327
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               110, 81
               

               Conread position:
               338-663
               

               Cow position:
               chr2:32410438-32410112 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               228
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               82, 150
               

               Conread position:
               338-664
               

               Cow position:
               chr2:49461013-49460687 (view UCSC Genome Browser custom track)
               

               Alignm length:
               330
               

               Alignm identity:
               239
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 150
               

               Conread position:
               338-666
               

               Cow position:
               chr2:72738800-72738483 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               218
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               63, 0
               

               Conread position:
               338-668
               

               Cow position:
               chr2:48359752-48360078 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               228
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               76, 130
               

               Conread position:
               338-668
               

               Cow position:
               chr2:56896654-56896324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               32, 103
               

               Conread position:
               338-668
               

               Cow position:
               chr2:74859783-74860105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               224
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               83, 149
               

               Conread position:
               338-672
               

               Cow position:
               chr2:312714-312391 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               242
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               209, 85
               

               Conread position:
               338-673
               

               Cow position:
               chr2:16300566-16300890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               209, 12
               

               Conread position:
               338-673
               

               Cow position:
               chr2:39691654-39691988 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               26, 16
               

               Conread position:
               338-673
               

               Cow position:
               chr2:47036629-47036276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 306
               

               Conread position:
               338-673
               

               Cow position:
               chr2:64767046-64766724 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 12
               

               Conread position:
               338-674
               

               Cow position:
               chr2:4724773-4725117 (view UCSC Genome Browser custom track)
               

               Alignm length:
               355
               

               Alignm identity:
               250
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               75, 195
               

               Conread position:
               338-674
               

               Cow position:
               chr2:5996638-5996972 (view UCSC Genome Browser custom track)
               

               Alignm length:
               340
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 138
               

               Conread position:
               338-674
               

               Cow position:
               chr2:16309772-16310104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               313, 77
               

               Conread position:
               338-674
               

               Cow position:
               chr2:32390412-32390742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               239
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               59, 150
               

               Conread position:
               338-674
               

               Cow position:
               chr2:33081950-33081616 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 108
               

               Conread position:
               338-674
               

               Cow position:
               chr2:36076014-36075693 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               207, 12
               

               Conread position:
               338-674
               

               Cow position:
               chr2:40455036-40455351 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               239
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               209, 78
               

               Conread position:
               338-674
               

               Cow position:
               chr2:56754680-56754347 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               241
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               35, 85
               

               Conread position:
               338-675
               

               Cow position:
               chr2:12752833-12753170 (view UCSC Genome Browser custom track)
               

               Alignm length:
               341
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 150
               

               Conread position:
               338-682
               

               Cow position:
               chr2:19982350-19982019 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               229
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               266, 90
               

               Conread position:
               338-682
               

               Cow position:
               chr2:24470834-24470491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 76
               

               Conread position:
               338-682
               

               Cow position:
               chr2:26923227-26923568 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 20
               

               Conread position:
               338-682
               

               Cow position:
               chr2:28795643-28795987 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 16
               

               Conread position:
               338-682
               

               Cow position:
               chr2:44058224-44057890 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               210, 72
               

               Conread position:
               338-683
               

               Cow position:
               chr2:2182467-2182125 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 109
               

               Conread position:
               338-683
               

               Cow position:
               chr2:2210372-2210033 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 109
               

               Conread position:
               338-683
               

               Cow position:
               chr2:2214196-2213857 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 109
               

               Conread position:
               338-683
               

               Cow position:
               chr2:4181316-4180971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 150
               

               Conread position:
               338-683
               

               Cow position:
               chr2:8732841-8733188 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 150
               

               Conread position:
               338-683
               

               Cow position:
               chr2:9188250-9187919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 43
               

               Conread position:
               338-683
               

               Cow position:
               chr2:13068195-13067860 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               207, 83
               

               Conread position:
               338-683
               

               Cow position:
               chr2:29967784-29968129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 160
               

               Conread position:
               338-683
               

               Cow position:
               chr2:41047450-41047105 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 150
               

               Conread position:
               338-683
               

               Cow position:
               chr2:43757839-43757496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 150
               

               Conread position:
               338-683
               

               Cow position:
               chr2:47183328-47182983 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 160
               

               Conread position:
               338-683
               

               Cow position:
               chr2:52498274-52497932 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 109
               

               Conread position:
               338-683
               

               Cow position:
               chr2:53541740-53542081 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 150
               

               Conread position:
               338-683
               

               Cow position:
               chr2:56264593-56264924 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 43
               

               Conread position:
               338-683
               

               Cow position:
               chr2:62730324-62730669 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 160
               

               Conread position:
               338-683
               

               Cow position:
               chr2:62815967-62816299 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               227
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               48, 34
               

               Conread position:
               338-684
               

               Cow position:
               chr2:169374-169035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 146
               

               Conread position:
               338-684
               

               Cow position:
               chr2:194910-194563 (view UCSC Genome Browser custom track)
               

               Alignm length:
               358
               

               Alignm identity:
               250
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               44, 160
               

               Conread position:
               338-684
               

               Cow position:
               chr2:246093-245750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 109
               

               Conread position:
               338-684
               

               Cow position:
               chr2:779617-779276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 95
               

               Conread position:
               338-684
               

               Cow position:
               chr2:974570-974228 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               87, 108
               

               Conread position:
               338-684
               

               Cow position:
               chr2:1201013-1200671 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 111
               

               Conread position:
               338-684
               

               Cow position:
               chr2:1692710-1693057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 22
               

               Conread position:
               338-684
               

               Cow position:
               chr2:2086359-2086016 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 160
               

               Conread position:
               338-684
               

               Cow position:
               chr2:2411013-2410661 (view UCSC Genome Browser custom track)
               

               Alignm length:
               356
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 166
               

               Conread position:
               338-684
               

               Cow position:
               chr2:3833708-3833372 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               91, 0
               

               Conread position:
               338-684
               

               Cow position:
               chr2:3839090-3839415 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               207, 85
               

               Conread position:
               338-684
               

               Cow position:
               chr2:4452169-4452515 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 160
               

               Conread position:
               338-684
               

               Cow position:
               chr2:4932385-4932045 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 91
               

               Conread position:
               338-684
               

               Cow position:
               chr2:5296086-5296421 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               105, 148
               

               Conread position:
               338-684
               

               Cow position:
               chr2:6290716-6291056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               254
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 50
               

               Conread position:
               338-684
               

               Cow position:
               chr2:7369479-7369819 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 101
               

               Conread position:
               338-684
               

               Cow position:
               chr2:8120502-8120849 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 160
               

               Conread position:
               338-684
               

               Cow position:
               chr2:9736997-9736644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               362
               

               Alignm identity:
               234
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               70, 141
               

               Conread position:
               338-684
               

               Cow position:
               chr2:9957268-9956926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 154
               

               Conread position:
               338-684
               

               Cow position:
               chr2:9963268-9962926 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 154
               

               Conread position:
               338-684
               

               Cow position:
               chr2:10184426-10184084 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 15
               

               Conread position:
               338-684
               

               Cow position:
               chr2:10731072-10730729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 46
               

               Conread position:
               338-684
               

               Cow position:
               chr2:11684824-11685148 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               246
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               208, 56
               

               Conread position:
               338-684
               

               Cow position:
               chr2:12222478-12222136 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               246
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 0
               

               Conread position:
               338-684
               

               Cow position:
               chr2:14209030-14208690 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 107
               

               Conread position:
               338-684
               

               Cow position:
               chr2:16305897-16306227 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               245
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               211, 56
               

               Conread position:
               338-684
               

               Cow position:
               chr2:16323500-16323835 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 77
               

               Conread position:
               338-684
               

               Cow position:
               chr2:18161134-18160800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               245
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               81, 148
               

               Conread position:
               338-684
               

               Cow position:
               chr2:19013160-19013507 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 149
               

               Conread position:
               338-684
               

               Cow position:
               chr2:20891026-20890696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               247
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               20, 28
               

               Conread position:
               338-684
               

               Cow position:
               chr2:21982952-21982613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 108
               

               Conread position:
               338-684
               

               Cow position:
               chr2:22079711-22080056 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 164
               

               Conread position:
               338-684
               

               Cow position:
               chr2:24687485-24687823 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 72
               

               Conread position:
               338-684
               

               Cow position:
               chr2:24927216-24927558 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 63
               

               Conread position:
               338-684
               

               Cow position:
               chr2:25022897-25023244 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 160
               

               Conread position:
               338-684
               

               Cow position:
               chr2:25886750-25886410 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 108
               

               Conread position:
               338-684
               

               Cow position:
               chr2:28647816-28647473 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 109
               

               Conread position:
               338-684
               

               Cow position:
               chr2:29217520-29217865 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 16
               

               Conread position:
               338-684
               

               Cow position:
               chr2:32064247-32063904 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 109
               

               Conread position:
               338-684
               

               Cow position:
               chr2:32862804-32862479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               246
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               220, 25
               

               Conread position:
               338-684
               

               Cow position:
               chr2:34471064-34470729 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               239
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               320, 44
               

               Conread position:
               338-684
               

               Cow position:
               chr2:34490259-34490586 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               242
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               210, 74
               

               Conread position:
               338-684
               

               Cow position:
               chr2:35357793-35358157 (view UCSC Genome Browser custom track)
               

               Alignm length:
               365
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               99, 0
               

               Conread position:
               338-684
               

               Cow position:
               chr2:36276313-36275973 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               241
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               83, 159
               

               Conread position:
               338-684
               

               Cow position:
               chr2:39423731-39424077 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 150
               

               Conread position:
               338-684
               

               Cow position:
               chr2:39676960-39676617 (view UCSC Genome Browser custom track)
               

               Alignm length:
               353
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 76
               

               Conread position:
               338-684
               

               Cow position:
               chr2:41952603-41952939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               352
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 126
               

               Conread position:
               338-684
               

               Cow position:
               chr2:42668901-42668562 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 104
               

               Conread position:
               338-684
               

               Cow position:
               chr2:44093174-44093511 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 83
               

               Conread position:
               338-684
               

               Cow position:
               chr2:44477412-44477755 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               253
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 109
               

               Conread position:
               338-684
               

               Cow position:
               chr2:45212886-45212540 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 148
               

               Conread position:
               338-684
               

               Cow position:
               chr2:48851448-48851102 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 160
               

               Conread position:
               338-684
               

               Cow position:
               chr2:49629125-49629471 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 160
               

               Conread position:
               338-684
               

               Cow position:
               chr2:50079364-50079707 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 104
               

               Conread position:
               338-684
               

               Cow position:
               chr2:50981346-50981006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 104
               

               Conread position:
               338-684
               

               Cow position:
               chr2:53004399-53004057 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 147
               

               Conread position:
               338-684
               

               Cow position:
               chr2:53331602-53331948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 160
               

               Conread position:
               338-684
               

               Cow position:
               chr2:54695441-54695782 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               262
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 20
               

               Conread position:
               338-684
               

               Cow position:
               chr2:54739286-54739628 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 150
               

               Conread position:
               338-684
               

               Cow position:
               chr2:57053367-57053709 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 150
               

               Conread position:
               338-684
               

               Cow position:
               chr2:57337758-57338104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 160
               

               Conread position:
               338-684
               

               Cow position:
               chr2:57937198-57937542 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 160
               

               Conread position:
               338-684
               

               Cow position:
               chr2:59411941-59411595 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               256
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 150
               

               Conread position:
               338-684
               

               Cow position:
               chr2:70709345-70709685 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 23
               

               Conread position:
               338-684
               

               Cow position:
               chr2:72791771-72791429 (view UCSC Genome Browser custom track)
               

               Alignm length:
               351
               

               Alignm identity:
               252
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 39
               

               Conread position:
               338-684
               

               Cow position:
               chr2:72932286-72931936 (view UCSC Genome Browser custom track)
               

               Alignm length:
               354
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               82, 163
               

               Conread position:
               338-684
               

               Cow position:
               chr2:73194788-73195127 (view UCSC Genome Browser custom track)
               

               Alignm length:
               348
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               210, 63
               

               Conread position:
               338-684
               

               Cow position:
               chr2:77858146-77858479 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               197, 70
               

               Conread position:
               338-684
               

               Cow position:
               chr2:80290964-80290618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 160
               

               Conread position:
               338-684
               

               Cow position:
               chr2:85081133-85080794 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 160
               

               Conread position:
               341-520
               

               Cow position:
               chr2:59567775-59567952 (view UCSC Genome Browser custom track)
               

               Alignm length:
               183
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               23, 16
               

               Conread position:
               341-567
               

               Cow position:
               chr2:42197289-42197513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               155
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               99, 85
               

               Conread position:
               341-626
               

               Cow position:
               chr2:44651487-44651769 (view UCSC Genome Browser custom track)
               

               Alignm length:
               290
               

               Alignm identity:
               208
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               17, 145
               

               Conread position:
               341-631
               

               Cow position:
               chr2:60366982-60366706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               292
               

               Alignm identity:
               199
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               206, 79
               

               Conread position:
               341-671
               

               Cow position:
               chr2:12047870-12048183 (view UCSC Genome Browser custom track)
               

               Alignm length:
               333
               

               Alignm identity:
               234
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               84, 145
               

               Conread position:
               341-674
               

               Cow position:
               chr2:41155998-41156325 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               238
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               75, 36
               

               Conread position:
               341-675
               

               Cow position:
               chr2:16320741-16321065 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 69
               

               Conread position:
               341-683
               

               Cow position:
               chr2:46908645-46908303 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 147
               

               Conread position:
               341-684
               

               Cow position:
               chr2:6005032-6004689 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               257
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 157
               

               Conread position:
               341-684
               

               Cow position:
               chr2:16332724-16333053 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               235
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               170, 29
               

               Conread position:
               341-684
               

               Cow position:
               chr2:49623982-49623644 (view UCSC Genome Browser custom track)
               

               Alignm length:
               349
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               17, 12
               

               Conread position:
               341-684
               

               Cow position:
               chr2:54728272-54727935 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 145
               

               Conread position:
               341-684
               

               Cow position:
               chr2:71520879-71520546 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               233
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               19, 13
               

               Conread position:
               341-684
               

               Cow position:
               chr2:78748105-78748443 (view UCSC Genome Browser custom track)
               

               Alignm length:
               350
               

               Alignm identity:
               242
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               17, 108
               

               Conread position:
               341-684
               

               Cow position:
               chr2:78764462-78764800 (view UCSC Genome Browser custom track)
               

               Alignm length:
               345
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               208, 73
               

               Conread position:
               342-667
               

               Cow position:
               chr2:49462724-49463047 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 156
               

               Conread position:
               342-681
               

               Cow position:
               chr2:42331042-42330715 (view UCSC Genome Browser custom track)
               

               Alignm length:
               343
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               86, 8
               

               Conread position:
               342-684
               

               Cow position:
               chr2:10467406-10467743 (view UCSC Genome Browser custom track)
               

               Alignm length:
               347
               

               Alignm identity:
               255
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 11
               

               Conread position:
               342-684
               

               Cow position:
               chr2:52620583-52620922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               247
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 105
               

               Conread position:
               344-512
               

               Cow position:
               chr2:3446838-3447007 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               130
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               72, 32
               

               Conread position:
               344-671
               

               Cow position:
               chr2:22134861-22134545 (view UCSC Genome Browser custom track)
               

               Alignm length:
               332
               

               Alignm identity:
               221
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               63, 120
               

               Conread position:
               344-672
               

               Cow position:
               chr2:2206009-2205676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               336
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 173
               

               Conread position:
               344-684
               

               Cow position:
               chr2:32457254-32456922 (view UCSC Genome Browser custom track)
               

               Alignm length:
               342
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               203, 71
               

               Conread position:
               344-684
               

               Cow position:
               chr2:52161063-52160731 (view UCSC Genome Browser custom track)
               

               Alignm length:
               346
               

               Alignm identity:
               242
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               73, 118
               

               Conread position:
               350-503
               

               Cow position:
               chr2:15748994-15749149 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               117
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               66, 100
               

               Conread position:
               350-684
               

               Cow position:
               chr2:45937898-45937578 (view UCSC Genome Browser custom track)
               

               Alignm length:
               338
               

               Alignm identity:
               251
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 97
               

               Conread position:
               350-684
               

               Cow position:
               chr2:58565901-58565584 (view UCSC Genome Browser custom track)
               

               Alignm length:
               339
               

               Alignm identity:
               241
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               166, 66
               

               Conread position:
               356-682
               

               Cow position:
               chr2:84756340-84756664 (view UCSC Genome Browser custom track)
               

               Alignm length:
               335
               

               Alignm identity:
               217
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               8, 42
               

               Conread position:
               356-684
               

               Cow position:
               chr2:37850335-37850023 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               215
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               358-684
               

               Cow position:
               chr2:31835239-31835570 (view UCSC Genome Browser custom track)
               

               Alignm length:
               337
               

               Alignm identity:
               219
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               57, 98
               

               Conread position:
               359-684
               

               Cow position:
               chr2:25384296-25384613 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               232
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               57, 87
               

               Conread position:
               361-545
               

               Cow position:
               chr2:6964490-6964670 (view UCSC Genome Browser custom track)
               

               Alignm length:
               188
               

               Alignm identity:
               144
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               9, 24
               

               Conread position:
               362-684
               

               Cow position:
               chr2:10879923-10880239 (view UCSC Genome Browser custom track)
               

               Alignm length:
               326
               

               Alignm identity:
               210
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               184, 52
               

               Conread position:
               363-551
               

               Cow position:
               chr2:9972513-9972701 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               151
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               58, 125
               

               Conread position:
               363-582
               

               Cow position:
               chr2:16902219-16902434 (view UCSC Genome Browser custom track)
               

               Alignm length:
               222
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               58, 84
               

               Conread position:
               363-600
               

               Cow position:
               chr2:38594367-38594135 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               58, 97
               

               Conread position:
               363-607
               

               Cow position:
               chr2:67189419-67189662 (view UCSC Genome Browser custom track)
               

               Alignm length:
               247
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 131
               

               Conread position:
               363-621
               

               Cow position:
               chr2:8701630-8701891 (view UCSC Genome Browser custom track)
               

               Alignm length:
               266
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               54, 34
               

               Conread position:
               363-627
               

               Cow position:
               chr2:11971460-11971204 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               182
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               57, 28
               

               Conread position:
               363-666
               

               Cow position:
               chr2:2602514-2602807 (view UCSC Genome Browser custom track)
               

               Alignm length:
               307
               

               Alignm identity:
               220
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               58, 79
               

               Conread position:
               363-667
               

               Cow position:
               chr2:12478436-12478133 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 79
               

               Conread position:
               363-667
               

               Cow position:
               chr2:25744284-25744582 (view UCSC Genome Browser custom track)
               

               Alignm length:
               308
               

               Alignm identity:
               219
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               58, 132
               

               Conread position:
               363-668
               

               Cow position:
               chr2:15574768-15574472 (view UCSC Genome Browser custom track)
               

               Alignm length:
               311
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 51
               

               Conread position:
               363-673
               

               Cow position:
               chr2:3622351-3622659 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               226
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 125
               

               Conread position:
               363-674
               

               Cow position:
               chr2:27291980-27291676 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               215
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               58, 11
               

               Conread position:
               363-675
               

               Cow position:
               chr2:1649868-1650182 (view UCSC Genome Browser custom track)
               

               Alignm length:
               321
               

               Alignm identity:
               212
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               58, 88
               

               Conread position:
               363-675
               

               Cow position:
               chr2:67956474-67956783 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 88
               

               Conread position:
               363-683
               

               Cow position:
               chr2:2456675-2456355 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               244
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 126
               

               Conread position:
               363-684
               

               Cow position:
               chr2:44933193-44932877 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 82
               

               Conread position:
               363-684
               

               Cow position:
               chr2:63290087-63289778 (view UCSC Genome Browser custom track)
               

               Alignm length:
               324
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               163, 59
               

               Conread position:
               364-661
               

               Cow position:
               chr2:49632617-49632908 (view UCSC Genome Browser custom track)
               

               Alignm length:
               301
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 117
               

               Conread position:
               364-684
               

               Cow position:
               chr2:12172632-12172332 (view UCSC Genome Browser custom track)
               

               Alignm length:
               322
               

               Alignm identity:
               216
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               183, 59
               

               Conread position:
               364-684
               

               Cow position:
               chr2:43106157-43106476 (view UCSC Genome Browser custom track)
               

               Alignm length:
               328
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 70
               

               Conread position:
               364-684
               

               Cow position:
               chr2:43766154-43765831 (view UCSC Genome Browser custom track)
               

               Alignm length:
               329
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-33
               

               Alignm gaps (pig, cow):
               37, 110
               

               Conread position:
               365-684
               

               Cow position:
               chr2:5868478-5868162 (view UCSC Genome Browser custom track)
               

               Alignm length:
               323
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 77
               

               Conread position:
               366-570
               

               Cow position:
               chr2:816297-816502 (view UCSC Genome Browser custom track)
               

               Alignm length:
               208
               

               Alignm identity:
               150
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               55, 141
               

               Conread position:
               368-683
               

               Cow position:
               chr2:31408513-31408202 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 120
               

               Conread position:
               369-684
               

               Cow position:
               chr2:31740225-31739919 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               221
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               51, 116
               

               Conread position:
               370-684
               

               Cow position:
               chr2:1107325-1107014 (view UCSC Genome Browser custom track)
               

               Alignm length:
               319
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               50, 98
               

               Conread position:
               370-684
               

               Cow position:
               chr2:9909824-9910138 (view UCSC Genome Browser custom track)
               

               Alignm length:
               318
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 118
               

               Conread position:
               372-536
               

               Cow position:
               chr2:45915027-45914873 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               124
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               33, 0
               

               Conread position:
               372-668
               

               Cow position:
               chr2:55482357-55482076 (view UCSC Genome Browser custom track)
               

               Alignm length:
               300
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               49, 126
               

               Conread position:
               372-684
               

               Cow position:
               chr2:14824852-14825153 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 54
               

               Conread position:
               372-684
               

               Cow position:
               chr2:16328918-16329221 (view UCSC Genome Browser custom track)
               

               Alignm length:
               314
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 22
               

               Conread position:
               373-684
               

               Cow position:
               chr2:16754127-16753827 (view UCSC Genome Browser custom track)
               

               Alignm length:
               316
               

               Alignm identity:
               233
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 73
               

               Conread position:
               382-499
               

               Cow position:
               chr2:4923717-4923598 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               96
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               382-642
               

               Cow position:
               chr2:30128013-30127750 (view UCSC Genome Browser custom track)
               

               Alignm length:
               267
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               38, 102
               

               Conread position:
               384-636
               

               Cow position:
               chr2:18664700-18664944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               31, 77
               

               Conread position:
               384-653
               

               Cow position:
               chr2:47599516-47599258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               273
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               138, 57
               

               Conread position:
               384-665
               

               Cow position:
               chr2:31455283-31455555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               285
               

               Alignm identity:
               208
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               32, 158
               

               Conread position:
               384-683
               

               Cow position:
               chr2:8106271-8106571 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 115
               

               Conread position:
               384-684
               

               Cow position:
               chr2:49302168-49301870 (view UCSC Genome Browser custom track)
               

               Alignm length:
               304
               

               Alignm identity:
               230
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 69
               

               Conread position:
               386-683
               

               Cow position:
               chr2:49473729-49474024 (view UCSC Genome Browser custom track)
               

               Alignm length:
               303
               

               Alignm identity:
               229
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 104
               

               Conread position:
               394-684
               

               Cow position:
               chr2:5978876-5979160 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               227
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               153, 96
               

               Conread position:
               395-684
               

               Cow position:
               chr2:14900279-14900555 (view UCSC Genome Browser custom track)
               

               Alignm length:
               293
               

               Alignm identity:
               216
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               26, 70
               

               Conread position:
               396-683
               

               Cow position:
               chr2:4834742-4834459 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               219
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               25, 102
               

               Conread position:
               397-684
               

               Cow position:
               chr2:16315194-16315478 (view UCSC Genome Browser custom track)
               

               Alignm length:
               291
               

               Alignm identity:
               206
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               39, 54
               

               Conread position:
               401-669
               

               Cow position:
               chr2:20918283-20918035 (view UCSC Genome Browser custom track)
               

               Alignm length:
               271
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               146, 85
               

               Conread position:
               401-683
               

               Cow position:
               chr2:81414495-81414777 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               20, 97
               

               Conread position:
               409-600
               

               Cow position:
               chr2:32657622-32657806 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               11, 38
               

               Conread position:
               411-681
               

               Cow position:
               chr2:1317226-1316949 (view UCSC Genome Browser custom track)
               

               Alignm length:
               280
               

               Alignm identity:
               186
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               9, 76
               

               Conread position:
               411-684
               

               Cow position:
               chr2:6881338-6881606 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               203
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               136, 34
               

               Conread position:
               412-684
               

               Cow position:
               chr2:3788042-3787779 (view UCSC Genome Browser custom track)
               

               Alignm length:
               276
               

               Alignm identity:
               203
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               133, 26
               

               Conread position:
               412-684
               

               Cow position:
               chr2:63519828-63520098 (view UCSC Genome Browser custom track)
               

               Alignm length:
               275
               

               Alignm identity:
               194
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               28, 85
               

               Conread position:
               415-683
               

               Cow position:
               chr2:22991278-22991006 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               188
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               90, 79
               

               Conread position:
               416-683
               

               Cow position:
               chr2:29106105-29106370 (view UCSC Genome Browser custom track)
               

               Alignm length:
               269
               

               Alignm identity:
               201
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               130, 80
               

               Conread position:
               416-684
               

               Cow position:
               chr2:41181990-41182252 (view UCSC Genome Browser custom track)
               

               Alignm length:
               270
               

               Alignm identity:
               181
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               73, 61
               

               Conread position:
               423-684
               

               Cow position:
               chr2:1285439-1285696 (view UCSC Genome Browser custom track)
               

               Alignm length:
               264
               

               Alignm identity:
               186
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               125, 61
               

               Conread position:
               423-684
               

               Cow position:
               chr2:75478770-75478496 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               102, 22
               

               Conread position:
               424-582
               

               Cow position:
               chr2:83404321-83404166 (view UCSC Genome Browser custom track)
               

               Alignm length:
               160
               

               Alignm identity:
               121
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               121, 62
               

               Conread position:
               424-683
               

               Cow position:
               chr2:851361-851104 (view UCSC Genome Browser custom track)
               

               Alignm length:
               263
               

               Alignm identity:
               179
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               34, 60
               

               Conread position:
               425-627
               

               Cow position:
               chr2:37452178-37451982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               144
               

               Alignm E-value:
               9e-26
               

               Alignm gaps (pig, cow):
               38, 0
               

               Conread position:
               425-684
               

               Cow position:
               chr2:12285104-12285359 (view UCSC Genome Browser custom track)
               

               Alignm length:
               262
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               123, 20
               

               Conread position:
               434-683
               

               Cow position:
               chr2:39118497-39118746 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               144
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               112, 76
               

               Conread position:
               446-684
               

               Cow position:
               chr2:31417008-31417246 (view UCSC Genome Browser custom track)
               

               Alignm length:
               243
               

               Alignm identity:
               183
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               96, 50
               

               Conread position:
               446-684
               

               Cow position:
               chr2:74469769-74470002 (view UCSC Genome Browser custom track)
               

               Alignm length:
               240
               

               Alignm identity:
               180
               

               Alignm E-value:
               4.99983e-42
               

               Alignm gaps (pig, cow):
               100, 50
               

               Conread position:
               451-684
               

               Cow position:
               chr2:4401497-4401270 (view UCSC Genome Browser custom track)
               

               Alignm length:
               235
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               97, 45
               

               Conread position:
               464-683
               

               Cow position:
               chr2:12695745-12695536 (view UCSC Genome Browser custom track)
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               82, 32
               

               Conread position:
               465-682
               

               Cow position:
               chr2:16327984-16327770 (view UCSC Genome Browser custom track)
               

               Alignm length:
               219
               

               Alignm identity:
               160
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               81, 31
               

               Conread position:
               465-683
               

               Cow position:
               chr2:50061069-50060853 (view UCSC Genome Browser custom track)
               

               Alignm length:
               220
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-36
               

               Alignm gaps (pig, cow):
               83, 31
               

               Conread position:
               473-684
               

               Cow position:
               chr2:37323773-37323982 (view UCSC Genome Browser custom track)
               

               Alignm length:
               213
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               73, 23
               

               Conread position:
               475-683
               

               Cow position:
               chr2:68941175-68940970 (view UCSC Genome Browser custom track)
               

               Alignm length:
               210
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-35
               

               Alignm gaps (pig, cow):
               71, 21
               

               Conread position:
               479-683
               

               Cow position:
               chr2:6638688-6638486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               206
               

               Alignm identity:
               148
               

               Alignm E-value:
               5e-30
               

               Alignm gaps (pig, cow):
               67, 17
               

               Conread position:
               489-673
               

               Cow position:
               chr2:34577523-34577342 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               133
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               69, 7
               

               Conread position:
               489-675
               

               Cow position:
               chr2:12329904-12330091 (view UCSC Genome Browser custom track)
               

               Alignm length:
               189
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               59, 15
               

               Conread position:
               489-683
               

               Cow position:
               chr2:62999874-63000068 (view UCSC Genome Browser custom track)
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               57, 21
               

               Conread position:
               489-684
               

               Cow position:
               chr2:75515257-75515063 (view UCSC Genome Browser custom track)
               

               Alignm length:
               197
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               69, 27
               

               Conread position:
               490-684
               

               Cow position:
               chr2:44197332-44197525 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               36, 20
               

               Conread position:
               490-684
               

               Cow position:
               chr2:56113193-56113386 (view UCSC Genome Browser custom track)
               

               Alignm length:
               198
               

               Alignm identity:
               142
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               57, 90
               

               Conread position:
               494-684
               

               Cow position:
               chr2:19293094-19293282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               26, 18
               

               Conread position:
               494-684
               

               Cow position:
               chr2:52129604-52129412 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               54, 18
               

               Conread position:
               496-673
               

               Cow position:
               chr2:575514-575691 (view UCSC Genome Browser custom track)
               

               Alignm length:
               179
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               52, 16
               

               Conread position:
               496-684
               

               Cow position:
               chr2:280263-280075 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               135
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               52, 15
               

               Conread position:
               496-684
               

               Cow position:
               chr2:3793923-3793734 (view UCSC Genome Browser custom track)
               

               Alignm length:
               192
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               50, 16
               

               Conread position:
               496-684
               

               Cow position:
               chr2:24437240-24437052 (view UCSC Genome Browser custom track)
               

               Alignm length:
               190
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               53, 16
               

               Conread position:
               501-663
               

               Cow position:
               chr2:15750280-15750435 (view UCSC Genome Browser custom track)
               

               Alignm length:
               163
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               506-684
               

               Cow position:
               chr2:58473672-58473494 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               43, 34
               

               Conread position:
               509-684
               

               Cow position:
               chr2:40307792-40307971 (view UCSC Genome Browser custom track)
               

               Alignm length:
               180
               

               Alignm identity:
               129
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               511-682
               

               Cow position:
               chr2:26079512-26079681 (view UCSC Genome Browser custom track)
               

               Alignm length:
               173
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               9, 98
               

               Conread position:
               511-684
               

               Cow position:
               chr2:34572428-34572605 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               127
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               516-683
               

               Cow position:
               chr2:4805759-4805591 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               30, 0
               

               Conread position:
               517-684
               

               Cow position:
               chr2:4918091-4917923 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               120
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               527-656
               

               Cow position:
               chr2:33497521-33497651 (view UCSC Genome Browser custom track)
               

               Alignm length:
               132
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               20, 110
               

               Conread position:
               529-684
               

               Cow position:
               chr2:11153995-11153838 (view UCSC Genome Browser custom track)
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               532-683
               

               Cow position:
               chr2:34501123-34501275 (view UCSC Genome Browser custom track)
               

               Alignm length:
               153
               

               Alignm identity:
               110
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               14, 0
               

               Conread position:
               537-684
               

               Cow position:
               chr2:16073428-16073281 (view UCSC Genome Browser custom track)
               

               Alignm length:
               149
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               10, 99
               

               Conread position:
               547-682
               

               Cow position:
               chr2:39115812-39115948 (view UCSC Genome Browser custom track)
               

               Alignm length:
               137
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               113, 0
               
Show alignments to all cow chromosomes.
Conread position:	277-684
Cow position:	chr2:36982387-36982797 (view UCSC Genome Browser custom track)
Alignm length:	417
Alignm identity:	292
Alignm E-value:	0
Alignm gaps (pig, cow):	27, 171
Conread position:	286-684
Cow position:	chr2:46183793-46183390 (view UCSC Genome Browser custom track)
Alignm length:	409
Alignm identity:	291
Alignm E-value:	0
Alignm gaps (pig, cow):	18, 63
Conread position:	310-684
Cow position:	chr2:12594743-12595119 (view UCSC Genome Browser custom track)
Alignm length:	382
Alignm identity:	274
Alignm E-value:	0
Alignm gaps (pig, cow):	24, 193
Conread position:	329-545
Cow position:	chr2:28612296-28612084 (view UCSC Genome Browser custom track)
Alignm length:	221
Alignm identity:	162
Alignm E-value:	4e-29
Alignm gaps (pig, cow):	9, 57
Conread position:	333-639
Cow position:	chr2:6066218-6065922 (view UCSC Genome Browser custom track)
Alignm length:	310
Alignm identity:	215
Alignm E-value:	9e-36
Alignm gaps (pig, cow):	214, 44
Conread position:	334-682
Cow position:	chr2:906056-906395 (view UCSC Genome Browser custom track)
Alignm length:	352
Alignm identity:	249
Alignm E-value:	0
Alignm gaps (pig, cow):	80, 12
Conread position:	335-567
Cow position:	chr2:8747349-8747117 (view UCSC Genome Browser custom track)
Alignm length:	236
Alignm identity:	178
Alignm E-value:	1.99965e-42
Alignm gaps (pig, cow):	7, 153
Conread position:	335-626
Cow position:	chr2:1434056-1433760 (view UCSC Genome Browser custom track)
Alignm length:	297
Alignm identity:	210
Alignm E-value:	8.40779e-45
Alignm gaps (pig, cow):	86, 0
Conread position:	335-674
Cow position:	chr2:28639085-28638758 (view UCSC Genome Browser custom track)
Alignm length:	341
Alignm identity:	244
Alignm E-value:	0
Alignm gaps (pig, cow):	212, 91
Conread position:	336-684
Cow position:	chr2:11694231-11694573 (view UCSC Genome Browser custom track)
Alignm length:	350
Alignm identity:	236
Alignm E-value:	1.99993e-41
Alignm gaps (pig, cow):	211, 92
Conread position:	337-528
Cow position:	chr2:11157325-11157138 (view UCSC Genome Browser custom track)
Alignm length:	194
Alignm identity:	143
Alignm E-value:	4e-28
Alignm gaps (pig, cow):	84, 110
Conread position:	337-627
Cow position:	chr2:11688219-11688503 (view UCSC Genome Browser custom track)
Alignm length:	292
Alignm identity:	190
Alignm E-value:	3e-26
Alignm gaps (pig, cow):	221, 84
Conread position:	337-672
Cow position:	chr2:26908543-26908879 (view UCSC Genome Browser custom track)
Alignm length:	345
Alignm identity:	242
Alignm E-value:	8.40779e-45
Alignm gaps (pig, cow):	84, 132
Conread position:	337-684
Cow position:	chr2:32433531-32433184 (view UCSC Genome Browser custom track)
Alignm length:	359
Alignm identity:	267
Alignm E-value:	0
Alignm gaps (pig, cow):	86, 58
Conread position:	338-486
Cow position:	chr2:16303121-16303261 (view UCSC Genome Browser custom track)
Alignm length:	149
Alignm identity:	115
Alignm E-value:	7e-23
Alignm gaps (pig, cow):	77, 0
Conread position:	338-491
Cow position:	chr2:280892-280737 (view UCSC Genome Browser custom track)
Alignm length:	158
Alignm identity:	124
Alignm E-value:	1e-27
Alignm gaps (pig, cow):	26, 16
Conread position:	338-497
Cow position:	chr2:34500616-34500455 (view UCSC Genome Browser custom track)
Alignm length:	162
Alignm identity:	124
Alignm E-value:	5e-30
Alignm gaps (pig, cow):	83, 0
Conread position:	338-501
Cow position:	chr2:32640743-32640910 (view UCSC Genome Browser custom track)
Alignm length:	168
Alignm identity:	123
Alignm E-value:	8e-25
Alignm gaps (pig, cow):	87, 0
Conread position:	338-503
Cow position:	chr2:11719590-11719754 (view UCSC Genome Browser custom track)
Alignm length:	167
Alignm identity:	118
Alignm E-value:	5e-21
Alignm gaps (pig, cow):	98, 146
Conread position:	338-507
Cow position:	chr2:18063718-18063547 (view UCSC Genome Browser custom track)
Alignm length:	173
Alignm identity:	126
Alignm E-value:	8e-25
Alignm gaps (pig, cow):	80, 161