Cow genome map
| Conread name: | Ss1.1-mCP1-MI-P-CP1-nzc-k-01-0-UI.s1.3 |
| Conread position: | 310-668 |
| Cow position: | chr21:5631575-5631217 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 246 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 29, 83 |
| Conread position: | 335-658 |
| Cow position: | chr21:22462622-22462944 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 59 |
| Conread position: | 337-672 |
| Cow position: | chr21:11241882-11242201 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 266, 17 |
| Conread position: | 337-682 |
| Cow position: | chr21:46290823-46291153 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 229 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 23, 9 |
| Conread position: | 337-684 |
| Cow position: | chr21:35390700-35390369 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 248 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 84, 144 |
| Conread position: | 338-481 |
| Cow position: | chr21:19352355-19352500 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 338-487 |
| Cow position: | chr21:362164-362312 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 118 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 338-491 |
| Cow position: | chr21:11508041-11508195 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 65, 33 |
| Conread position: | 338-497 |
| Cow position: | chr21:28257848-28258006 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 120 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 85, 43 |
| Conread position: | 338-505 |
| Cow position: | chr21:25126232-25126398 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 123 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 83, 101 |
| Conread position: | 338-506 |
| Cow position: | chr21:4899746-4899577 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 129 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 83, 151 |
| Conread position: | 338-522 |
| Cow position: | chr21:34551718-34551536 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 22, 16 |
| Conread position: | 338-538 |
| Cow position: | chr21:29949533-29949336 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-37 |
| Alignm gaps (pig, cow): | 83, 126 |
| Conread position: | 338-545 |
| Cow position: | chr21:27610312-27610106 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 83, 150 |
| Conread position: | 338-559 |
| Cow position: | chr21:47976266-47976487 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 172 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 83, 150 |
| Conread position: | 338-602 |
| Cow position: | chr21:9894578-9894843 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 193 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 78, 110 |
| Conread position: | 338-613 |
| Cow position: | chr21:5011306-5011032 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 200 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 83, 151 |
| Conread position: | 338-615 |
| Cow position: | chr21:37123926-37123653 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 150 |
| Conread position: | 338-623 |
| Cow position: | chr21:38242441-38242155 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 204 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 83, 110 |
| Conread position: | 338-627 |
| Cow position: | chr21:36981079-36981356 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 206 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 338-631 |
| Cow position: | chr21:30352377-30352678 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 218 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 79, 59 |
| Conread position: | 338-639 |
| Cow position: | chr21:20742232-20741936 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 219 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 79, 95 |
| Conread position: | 338-639 |
| Cow position: | chr21:38024528-38024822 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 211 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 123, 0 |
| Conread position: | 338-642 |
| Cow position: | chr21:28853416-28853114 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 221 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 82, 159 |
| Conread position: | 338-655 |
| Cow position: | chr21:4587567-4587240 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 238 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 17, 79 |
| Conread position: | 338-661 |
| Cow position: | chr21:49092008-49091686 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 231 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 83, 36 |
| Conread position: | 338-666 |
| Cow position: | chr21:13274106-13274431 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 219 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 20, 127 |
| Conread position: | 338-668 |
| Cow position: | chr21:650467-650126 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 236 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 82, 211 |
| Conread position: | 338-668 |
| Cow position: | chr21:21171858-21171546 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 238 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 83 |
| Conread position: | 338-670 |
| Cow position: | chr21:4036683-4037009 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 110 |
| Conread position: | 338-670 |
| Cow position: | chr21:4091767-4092095 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 109 |
| Conread position: | 338-671 |
| Cow position: | chr21:15248251-15247917 (view UCSC Genome Browser custom track) |
| Alignm length: | 341 |
| Alignm identity: | 231 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 81, 50 |
| Conread position: | 338-671 |
| Cow position: | chr21:46758350-46758669 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 238 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 322, 78 |
| Conread position: | 338-671 |
| Cow position: | chr21:49297254-49297588 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 233 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 33, 161 |
| Conread position: | 338-672 |
| Cow position: | chr21:31513887-31513553 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 144 |
| Conread position: | 338-672 |
| Cow position: | chr21:39427506-39427842 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 161 |
| Conread position: | 338-673 |
| Cow position: | chr21:22943046-22943381 (view UCSC Genome Browser custom track) |
| Alignm length: | 340 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 131 |
| Conread position: | 338-673 |
| Cow position: | chr21:33358762-33358454 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 338-674 |
| Cow position: | chr21:46975629-46975309 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 77 |
| Conread position: | 338-681 |
| Cow position: | chr21:36375418-36375761 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 150 |
| Conread position: | 338-683 |
| Cow position: | chr21:5937894-5938236 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 253 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 72, 154 |
| Conread position: | 338-683 |
| Cow position: | chr21:7063240-7062895 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 160 |
| Conread position: | 338-683 |
| Cow position: | chr21:11291119-11291463 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 116 |
| Conread position: | 338-683 |
| Cow position: | chr21:21025906-21026257 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 152 |
| Conread position: | 338-683 |
| Cow position: | chr21:27149126-27148779 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 150 |
| Conread position: | 338-683 |
| Cow position: | chr21:34902945-34902612 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 85 |
| Conread position: | 338-683 |
| Cow position: | chr21:37040184-37039845 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 29 |
| Conread position: | 338-683 |
| Cow position: | chr21:39225626-39225286 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 150 |
| Conread position: | 338-683 |
| Cow position: | chr21:41797293-41796948 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 150 |
| Conread position: | 338-684 |
| Cow position: | chr21:41650-41998 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 116 |
| Conread position: | 338-684 |
| Cow position: | chr21:995996-995659 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 109 |
| Conread position: | 338-684 |
| Cow position: | chr21:1194975-1195313 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 16 |
| Conread position: | 338-684 |
| Cow position: | chr21:2418636-2418973 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 116 |
| Conread position: | 338-684 |
| Cow position: | chr21:2665709-2665364 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 150 |
| Conread position: | 338-684 |
| Cow position: | chr21:3171013-3171345 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 46, 16 |
| Conread position: | 338-684 |
| Cow position: | chr21:3781207-3781562 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 109 |
| Conread position: | 338-684 |
| Cow position: | chr21:3805357-3805696 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 150 |
| Conread position: | 338-684 |
| Cow position: | chr21:4186378-4186723 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 64 |
| Conread position: | 338-684 |
| Cow position: | chr21:4737030-4736667 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 248 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 83, 210 |
| Conread position: | 338-684 |
| Cow position: | chr21:5019576-5019921 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 112 |
| Conread position: | 338-684 |
| Cow position: | chr21:6967030-6966697 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 108 |
| Conread position: | 338-684 |
| Cow position: | chr21:7154766-7155107 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 15 |
| Conread position: | 338-684 |
| Cow position: | chr21:10569127-10569469 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 131 |
| Conread position: | 338-684 |
| Cow position: | chr21:24647256-24647590 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 225 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 83, 65 |
| Conread position: | 338-684 |
| Cow position: | chr21:24948543-24948883 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 267 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 191, 70 |
| Conread position: | 338-684 |
| Cow position: | chr21:26401320-26400991 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 240 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 82, 96 |
| Conread position: | 338-684 |
| Cow position: | chr21:26700236-26699890 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 151 |
| Conread position: | 338-684 |
| Cow position: | chr21:27031684-27032014 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 248 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 87, 16 |
| Conread position: | 338-684 |
| Cow position: | chr21:27068531-27068185 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 160 |
| Conread position: | 338-684 |
| Cow position: | chr21:27285879-27286220 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 83 |
| Conread position: | 338-684 |
| Cow position: | chr21:27621067-27620722 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 116 |
| Conread position: | 338-684 |
| Cow position: | chr21:28614748-28615093 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 148 |
| Conread position: | 338-684 |
| Cow position: | chr21:28987573-28987900 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 338-684 |
| Cow position: | chr21:29002895-29002547 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 251 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 81, 169 |
| Conread position: | 338-684 |
| Cow position: | chr21:29255056-29254714 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 183, 94 |
| Conread position: | 338-684 |
| Cow position: | chr21:30596659-30596314 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 160 |
| Conread position: | 338-684 |
| Cow position: | chr21:31251439-31251771 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 247 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 83, 58 |
| Conread position: | 338-684 |
| Cow position: | chr21:31973532-31973198 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 210, 72 |
| Conread position: | 338-684 |
| Cow position: | chr21:32397621-32397275 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 160 |
| Conread position: | 338-684 |
| Cow position: | chr21:32831791-32831470 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 246 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 78, 150 |
| Conread position: | 338-684 |
| Cow position: | chr21:34656389-34656736 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 106, 162 |
| Conread position: | 338-684 |
| Cow position: | chr21:35781419-35781090 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 250 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 22, 17 |
| Conread position: | 338-684 |
| Cow position: | chr21:36978473-36978139 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 122 |
| Conread position: | 338-684 |
| Cow position: | chr21:37373656-37374000 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 150 |
| Conread position: | 338-684 |
| Cow position: | chr21:42916237-42916567 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 118 |
| Conread position: | 338-684 |
| Cow position: | chr21:44531628-44531970 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 238 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 83, 149 |
| Conread position: | 338-684 |
| Cow position: | chr21:44763526-44763186 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 104 |
| Conread position: | 338-684 |
| Cow position: | chr21:46969250-46968907 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 239 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 27, 16 |
| Conread position: | 338-684 |
| Cow position: | chr21:47943385-47943723 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 109 |
| Conread position: | 338-684 |
| Cow position: | chr21:48529988-48529646 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 126 |
| Conread position: | 339-684 |
| Cow position: | chr21:4252190-4251856 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 21, 15 |
| Conread position: | 341-506 |
| Cow position: | chr21:7038782-7038947 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 127 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 80, 147 |
| Conread position: | 341-514 |
| Cow position: | chr21:48487198-48487370 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 80, 119 |
| Conread position: | 341-667 |
| Cow position: | chr21:3587610-3587301 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 341-674 |
| Cow position: | chr21:2538716-2538385 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 94 |
| Conread position: | 341-674 |
| Cow position: | chr21:21051155-21051494 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 241 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 80, 158 |
| Conread position: | 341-682 |
| Cow position: | chr21:4097099-4097428 (view UCSC Genome Browser custom track) |
| Alignm length: | 345 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 75, 162 |
| Conread position: | 341-684 |
| Cow position: | chr21:4078487-4078823 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 82 |
| Conread position: | 341-684 |
| Cow position: | chr21:34256157-34255818 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 101 |
| Conread position: | 341-684 |
| Cow position: | chr21:38019669-38020002 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 244 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 80, 10 |
| Conread position: | 342-481 |
| Cow position: | chr21:44254057-44254197 (view UCSC Genome Browser custom track) |
| Alignm length: | 142 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 79, 8 |
| Conread position: | 342-682 |
| Cow position: | chr21:13285361-13285695 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 236 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 23, 12 |
| Conread position: | 342-684 |
| Cow position: | chr21:47647770-47648113 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 106 |
| Conread position: | 350-682 |
| Cow position: | chr21:28879270-28878943 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 72 |
| Conread position: | 358-674 |
| Cow position: | chr21:34073138-34072811 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 235 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 63, 319 |
| Conread position: | 359-684 |
| Cow position: | chr21:1686694-1686375 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 227 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 60, 75 |
| Conread position: | 360-670 |
| Cow position: | chr21:4938111-4938416 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 204 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 64, 140 |
| Conread position: | 360-684 |
| Cow position: | chr21:2879372-2879052 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 242 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 82 |
| Conread position: | 361-494 |
| Cow position: | chr21:4565894-4566025 (view UCSC Genome Browser custom track) |
| Alignm length: | 134 |
| Alignm identity: | 101 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 363-615 |
| Cow position: | chr21:3922676-3922927 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 195 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 135 |
| Conread position: | 363-649 |
| Cow position: | chr21:39080022-39079728 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 197 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 58, 157 |
| Conread position: | 363-652 |
| Cow position: | chr21:23803222-23802952 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 203 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 184, 43 |
| Conread position: | 363-684 |
| Cow position: | chr21:13112931-13112617 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 185, 58 |
| Conread position: | 363-684 |
| Cow position: | chr21:24299066-24298752 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 55, 97 |
| Conread position: | 364-595 |
| Cow position: | chr21:21292015-21291786 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 56, 123 |
| Conread position: | 365-684 |
| Cow position: | chr21:1285772-1285478 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 56, 82 |
| Conread position: | 365-684 |
| Cow position: | chr21:32884970-32884662 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 210 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 56, 134 |
| Conread position: | 367-684 |
| Cow position: | chr21:33662748-33663068 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 231 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 135, 176 |
| Conread position: | 370-639 |
| Cow position: | chr21:35143442-35143176 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 77 |
| Conread position: | 370-684 |
| Cow position: | chr21:2513313-2513622 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 46, 125 |
| Conread position: | 370-684 |
| Cow position: | chr21:26634696-26634383 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 116 |
| Conread position: | 374-674 |
| Cow position: | chr21:46881619-46881921 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 47, 114 |
| Conread position: | 377-683 |
| Cow position: | chr21:4717409-4717712 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 222 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 54 |
| Conread position: | 378-646 |
| Cow position: | chr21:21942077-21941818 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 42, 91 |
| Conread position: | 378-684 |
| Cow position: | chr21:21132307-21132010 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 218 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 43, 109 |
| Conread position: | 378-684 |
| Cow position: | chr21:33318033-33317728 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 117 |
| Conread position: | 382-684 |
| Cow position: | chr21:29909838-29909540 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 39, 104 |
| Conread position: | 383-656 |
| Cow position: | chr21:7163506-7163233 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 210 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 38, 104 |
| Conread position: | 384-683 |
| Cow position: | chr21:4481772-4482071 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 114 |
| Conread position: | 385-684 |
| Cow position: | chr21:21917960-21918259 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 112 |
| Conread position: | 386-684 |
| Cow position: | chr21:17143154-17143452 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 225 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 35, 112 |
| Conread position: | 387-684 |
| Cow position: | chr21:24083866-24083578 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 211 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 49, 36 |
| Conread position: | 390-684 |
| Cow position: | chr21:5594211-5594499 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 98 |
| Conread position: | 392-641 |
| Cow position: | chr21:33984815-33984565 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 184 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 30, 97 |
| Conread position: | 401-674 |
| Cow position: | chr21:15548374-15548108 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 205 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 19, 8 |
| Conread position: | 401-684 |
| Cow position: | chr21:10852761-10853040 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 203 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 20, 44 |
| Conread position: | 403-684 |
| Cow position: | chr21:44075771-44076056 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 109, 20 |
| Conread position: | 412-629 |
| Cow position: | chr21:30162742-30162530 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 185, 72 |
| Conread position: | 412-684 |
| Cow position: | chr21:39093284-39093548 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 188 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 19, 75 |
| Conread position: | 416-684 |
| Cow position: | chr21:26616397-26616142 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 204 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 23, 11 |
| Conread position: | 419-684 |
| Cow position: | chr21:19352350-19352087 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 77 |
| Conread position: | 425-684 |
| Cow position: | chr21:148664-148924 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 192 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 10, 73 |
| Conread position: | 436-684 |
| Cow position: | chr21:15398446-15398200 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 191 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 110, 60 |
| Conread position: | 439-684 |
| Cow position: | chr21:33256089-33256330 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 183 |
| Alignm E-value: | 8e-40 |
| Alignm gaps (pig, cow): | 109, 7 |
| Conread position: | 440-684 |
| Cow position: | chr21:30564289-30564526 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 110, 57 |
| Conread position: | 441-637 |
| Cow position: | chr21:10519353-10519547 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 105, 55 |
| Conread position: | 441-638 |
| Cow position: | chr21:49662883-49663074 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 149 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 106, 17 |
| Conread position: | 446-666 |
| Cow position: | chr21:469645-469856 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 101, 31 |
| Conread position: | 448-684 |
| Cow position: | chr21:25189184-25189417 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 100, 48 |
| Conread position: | 466-684 |
| Cow position: | chr21:49086715-49086510 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 489-684 |
| Cow position: | chr21:40268803-40268608 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 69, 21 |
| Conread position: | 490-673 |
| Cow position: | chr21:4280029-4279848 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 58, 27 |
| Conread position: | 490-683 |
| Cow position: | chr21:26455772-26455964 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 135 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 56, 5 |
| Conread position: | 492-674 |
| Cow position: | chr21:13299430-13299605 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 54, 22 |
| Conread position: | 494-684 |
| Cow position: | chr21:17224258-17224070 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 54, 20 |
| Conread position: | 497-684 |
| Cow position: | chr21:19613326-19613513 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 51, 13 |
| Conread position: | 512-683 |
| Cow position: | chr21:5544047-5543875 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 524-683 |
| Cow position: | chr21:47976622-47976782 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 536-684 |
| Cow position: | chr21:45784593-45784446 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 132, 0 |
Show alignments to all cow chromosomes.