Cow genome map
| Conread name: | Ss1.1-mCP1-MI-P-CP1-nzc-k-01-0-UI.s1.3 |
| Conread position: | 309-683 |
| Cow position: | chr24:39679845-39680203 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 281 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 112 |
| Conread position: | 314-671 |
| Cow position: | chr24:13177866-13177511 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 248 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 12, 26 |
| Conread position: | 329-684 |
| Cow position: | chr24:14880557-14880205 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 9, 114 |
| Conread position: | 335-684 |
| Cow position: | chr24:35868296-35867978 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 251 |
| Alignm E-value: | 2e-40 |
| Alignm gaps (pig, cow): | 7, 16 |
| Conread position: | 335-684 |
| Cow position: | chr24:42587352-42587688 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 71, 154 |
| Conread position: | 336-571 |
| Cow position: | chr24:39056382-39056146 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 29, 7 |
| Conread position: | 338-482 |
| Cow position: | chr24:8606688-8606834 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 114 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 338-488 |
| Cow position: | chr24:36132503-36132655 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 338-491 |
| Cow position: | chr24:9072841-9072685 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 116 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 338-492 |
| Cow position: | chr24:17454789-17454633 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 338-506 |
| Cow position: | chr24:4413208-4413048 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 338-536 |
| Cow position: | chr24:6678386-6678579 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 122, 0 |
| Conread position: | 338-550 |
| Cow position: | chr24:1297423-1297215 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 338-572 |
| Cow position: | chr24:22973413-22973644 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 174 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 83, 104 |
| Conread position: | 338-577 |
| Cow position: | chr24:1454123-1454354 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 209, 72 |
| Conread position: | 338-584 |
| Cow position: | chr24:36037870-36037627 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 183 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 83, 114 |
| Conread position: | 338-632 |
| Cow position: | chr24:19835749-19836043 (view UCSC Genome Browser custom track) |
| Alignm length: | 298 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 153 |
| Conread position: | 338-639 |
| Cow position: | chr24:11150780-11150482 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 108 |
| Conread position: | 338-654 |
| Cow position: | chr24:22818187-22818499 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 225 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 170, 61 |
| Conread position: | 338-662 |
| Cow position: | chr24:17299577-17299264 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 228 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 204, 81 |
| Conread position: | 338-663 |
| Cow position: | chr24:6667429-6667099 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 132 |
| Conread position: | 338-673 |
| Cow position: | chr24:20366707-20367042 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 150 |
| Conread position: | 338-673 |
| Cow position: | chr24:29154712-29155037 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 206, 85 |
| Conread position: | 338-674 |
| Cow position: | chr24:2711770-2712098 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 226 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 26, 17 |
| Conread position: | 338-676 |
| Cow position: | chr24:18711704-18712034 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 83, 147 |
| Conread position: | 338-681 |
| Cow position: | chr24:21248606-21248263 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 150 |
| Conread position: | 338-682 |
| Cow position: | chr24:14195517-14195177 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 93 |
| Conread position: | 338-682 |
| Cow position: | chr24:14377314-14376971 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 110 |
| Conread position: | 338-682 |
| Cow position: | chr24:20285002-20284661 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 150 |
| Conread position: | 338-682 |
| Cow position: | chr24:29189628-29189972 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 85, 158 |
| Conread position: | 338-683 |
| Cow position: | chr24:6021734-6021394 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 108 |
| Conread position: | 338-683 |
| Cow position: | chr24:6327024-6326684 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 109 |
| Conread position: | 338-683 |
| Cow position: | chr24:6440094-6440438 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 150 |
| Conread position: | 338-683 |
| Cow position: | chr24:7063908-7064251 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 46 |
| Conread position: | 338-683 |
| Cow position: | chr24:12333380-12333035 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 160 |
| Conread position: | 338-683 |
| Cow position: | chr24:12698676-12698331 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 148 |
| Conread position: | 338-683 |
| Cow position: | chr24:14350341-14350685 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 159 |
| Conread position: | 338-683 |
| Cow position: | chr24:34601678-34602026 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 248 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 83, 34 |
| Conread position: | 338-684 |
| Cow position: | chr24:3849909-3850255 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 262 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 149 |
| Conread position: | 338-684 |
| Cow position: | chr24:6069517-6069160 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 150 |
| Conread position: | 338-684 |
| Cow position: | chr24:6078781-6079117 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 155 |
| Conread position: | 338-684 |
| Cow position: | chr24:6657911-6657570 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 126 |
| Conread position: | 338-684 |
| Cow position: | chr24:11691655-11691312 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 109 |
| Conread position: | 338-684 |
| Cow position: | chr24:12126750-12126410 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 33 |
| Conread position: | 338-684 |
| Cow position: | chr24:12148758-12148413 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 36, 55 |
| Conread position: | 338-684 |
| Cow position: | chr24:12204020-12203681 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 207, 64 |
| Conread position: | 338-684 |
| Cow position: | chr24:12239214-12239544 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 251 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 22, 15 |
| Conread position: | 338-684 |
| Cow position: | chr24:13190513-13190859 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 160 |
| Conread position: | 338-684 |
| Cow position: | chr24:13234581-13234927 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 160 |
| Conread position: | 338-684 |
| Cow position: | chr24:14306563-14306931 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 256 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 30, 20 |
| Conread position: | 338-684 |
| Cow position: | chr24:14317197-14316852 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 232 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 76, 158 |
| Conread position: | 338-684 |
| Cow position: | chr24:14722789-14723125 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 85 |
| Conread position: | 338-684 |
| Cow position: | chr24:14759225-14759568 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 20 |
| Conread position: | 338-684 |
| Cow position: | chr24:16082146-16081800 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 97 |
| Conread position: | 338-684 |
| Cow position: | chr24:16098857-16099203 (view UCSC Genome Browser custom track) |
| Alignm length: | 360 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 83, 238 |
| Conread position: | 338-684 |
| Cow position: | chr24:16326198-16325873 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 235 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 209, 91 |
| Conread position: | 338-684 |
| Cow position: | chr24:16559962-16559617 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 115 |
| Conread position: | 338-684 |
| Cow position: | chr24:17323034-17323380 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 160 |
| Conread position: | 338-684 |
| Cow position: | chr24:18268142-18267801 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 35 |
| Conread position: | 338-684 |
| Cow position: | chr24:19468245-19467899 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 15 |
| Conread position: | 338-684 |
| Cow position: | chr24:19642266-19642606 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 265 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 83 |
| Conread position: | 338-684 |
| Cow position: | chr24:19689236-19688895 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 261 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 108 |
| Conread position: | 338-684 |
| Cow position: | chr24:19704043-19704385 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 160 |
| Conread position: | 338-684 |
| Cow position: | chr24:19884635-19884981 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 153 |
| Conread position: | 338-684 |
| Cow position: | chr24:25438637-25438967 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 109 |
| Conread position: | 338-684 |
| Cow position: | chr24:29350959-29350634 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 227 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 127, 63 |
| Conread position: | 338-684 |
| Cow position: | chr24:31183577-31183915 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 287, 59 |
| Conread position: | 338-684 |
| Cow position: | chr24:36557224-36556892 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 74 |
| Conread position: | 338-684 |
| Cow position: | chr24:36724406-36724753 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 270 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 162 |
| Conread position: | 338-684 |
| Cow position: | chr24:38004600-38004253 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 158 |
| Conread position: | 338-684 |
| Cow position: | chr24:38640485-38640823 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 77 |
| Conread position: | 338-684 |
| Cow position: | chr24:40468063-40467730 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 242 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 76, 121 |
| Conread position: | 338-684 |
| Cow position: | chr24:41004832-41005167 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 236 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 87, 108 |
| Conread position: | 338-684 |
| Cow position: | chr24:42583426-42583085 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 42, 86 |
| Conread position: | 341-566 |
| Cow position: | chr24:25275590-25275824 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 74, 173 |
| Conread position: | 341-572 |
| Cow position: | chr24:14335215-14335446 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 60, 65 |
| Conread position: | 341-603 |
| Cow position: | chr24:17367575-17367321 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 100, 42 |
| Conread position: | 341-671 |
| Cow position: | chr24:37198681-37198348 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 94, 123 |
| Conread position: | 341-674 |
| Cow position: | chr24:16473322-16473638 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 236 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 80, 36 |
| Conread position: | 341-683 |
| Cow position: | chr24:208657-208319 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 157 |
| Conread position: | 341-684 |
| Cow position: | chr24:6411824-6412166 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 79, 147 |
| Conread position: | 346-675 |
| Cow position: | chr24:6463320-6463647 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 228 |
| Alignm E-value: | 4.06377e-44 |
| Alignm gaps (pig, cow): | 74, 139 |
| Conread position: | 349-506 |
| Cow position: | chr24:29085860-29086014 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 9, 33 |
| Conread position: | 350-657 |
| Cow position: | chr24:38584789-38584486 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 45 |
| Conread position: | 354-561 |
| Cow position: | chr24:44964128-44963924 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 106, 72 |
| Conread position: | 359-675 |
| Cow position: | chr24:6338733-6339046 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 11, 90 |
| Conread position: | 359-684 |
| Cow position: | chr24:12570267-12570599 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 234 |
| Alignm E-value: | 7e-40 |
| Alignm gaps (pig, cow): | 72, 144 |
| Conread position: | 360-663 |
| Cow position: | chr24:6535130-6534843 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 360-673 |
| Cow position: | chr24:146230-145914 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 46 |
| Conread position: | 360-684 |
| Cow position: | chr24:41230978-41231291 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 220 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 56, 100 |
| Conread position: | 363-631 |
| Cow position: | chr24:37319289-37319048 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 191 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 363-668 |
| Cow position: | chr24:16907712-16908008 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 14 |
| Conread position: | 363-682 |
| Cow position: | chr24:13323217-13323531 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 174, 47 |
| Conread position: | 363-684 |
| Cow position: | chr24:12088570-12088883 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 229 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 58, 84 |
| Conread position: | 363-684 |
| Cow position: | chr24:13300481-13300167 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 233 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 48 |
| Conread position: | 364-684 |
| Cow position: | chr24:32362748-32362432 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 240 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 44 |
| Conread position: | 364-684 |
| Cow position: | chr24:33936288-33936590 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 215 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 365-671 |
| Cow position: | chr24:23093675-23093370 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 123 |
| Conread position: | 365-671 |
| Cow position: | chr24:23096413-23096108 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 226 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 123 |
| Conread position: | 365-674 |
| Cow position: | chr24:14263947-14264259 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 218 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 52, 30 |
| Conread position: | 365-684 |
| Cow position: | chr24:16208645-16208335 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 55, 95 |
| Conread position: | 366-684 |
| Cow position: | chr24:12910961-12911269 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 225 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 163, 114 |
| Conread position: | 370-683 |
| Cow position: | chr24:40551000-40551310 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 51, 77 |
| Conread position: | 378-684 |
| Cow position: | chr24:19674092-19674382 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 214 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 384-684 |
| Cow position: | chr24:12208178-12208468 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 214 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 164, 26 |
| Conread position: | 387-684 |
| Cow position: | chr24:6509683-6509395 (view UCSC Genome Browser custom track) |
| Alignm length: | 301 |
| Alignm identity: | 219 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 29, 8 |
| Conread position: | 389-684 |
| Cow position: | chr24:17410840-17411116 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 209 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 156, 35 |
| Conread position: | 395-684 |
| Cow position: | chr24:41535716-41535444 (view UCSC Genome Browser custom track) |
| Alignm length: | 292 |
| Alignm identity: | 206 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 31, 62 |
| Conread position: | 396-684 |
| Cow position: | chr24:1247927-1248208 (view UCSC Genome Browser custom track) |
| Alignm length: | 290 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 24, 76 |
| Conread position: | 398-652 |
| Cow position: | chr24:20387721-20387979 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 93, 9 |
| Conread position: | 398-684 |
| Cow position: | chr24:31380828-31381103 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 220 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 113, 21 |
| Conread position: | 401-684 |
| Cow position: | chr24:16647495-16647217 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 193 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 146, 8 |
| Conread position: | 415-683 |
| Cow position: | chr24:6963269-6963535 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 208 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 131, 81 |
| Conread position: | 417-621 |
| Cow position: | chr24:17997723-17997926 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 70, 125 |
| Conread position: | 417-684 |
| Cow position: | chr24:15934332-15934585 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 181 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 131, 68 |
| Conread position: | 424-648 |
| Cow position: | chr24:33321462-33321234 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 172 |
| Alignm E-value: | 9.00054e-42 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 442-684 |
| Cow position: | chr24:9089632-9089388 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 78, 54 |
| Conread position: | 445-683 |
| Cow position: | chr24:25371385-25371621 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 184 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 101, 51 |
| Conread position: | 447-684 |
| Cow position: | chr24:12466696-12466925 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 99, 16 |
| Conread position: | 471-684 |
| Cow position: | chr24:14742728-14742933 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 76, 12 |
| Conread position: | 481-684 |
| Cow position: | chr24:14276214-14276016 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 141 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 484-684 |
| Cow position: | chr24:14381802-14381604 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 80, 27 |
| Conread position: | 487-667 |
| Cow position: | chr24:16604288-16604108 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 61, 25 |
| Conread position: | 487-684 |
| Cow position: | chr24:30895318-30895512 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 60, 23 |
| Conread position: | 488-674 |
| Cow position: | chr24:9072574-9072391 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 59, 23 |
| Conread position: | 488-684 |
| Cow position: | chr24:32848657-32848851 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 60, 22 |
| Conread position: | 489-684 |
| Cow position: | chr24:36712743-36712938 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 153 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 495-683 |
| Cow position: | chr24:15295324-15295512 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 51, 15 |
| Conread position: | 498-683 |
| Cow position: | chr24:1949991-1950176 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 48, 12 |
| Conread position: | 504-673 |
| Cow position: | chr24:40150871-40150703 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 42, 72 |
| Conread position: | 505-684 |
| Cow position: | chr24:8606835-8607015 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 516-683 |
| Cow position: | chr24:34373109-34373277 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 519-684 |
| Cow position: | chr24:33985995-33986161 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 523-684 |
| Cow position: | chr24:29085347-29085187 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 23, 99 |
| Conread position: | 532-683 |
| Cow position: | chr24:12578067-12578219 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 532-684 |
| Cow position: | chr24:44942057-44942207 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 557-684 |
| Cow position: | chr24:17214768-17214893 (view UCSC Genome Browser custom track) |
| Alignm length: | 128 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 5, 0 |
Show alignments to all cow chromosomes.