Cow genome map
| Conread name: | Ss1.1-mCP1-MI-P-CP1-nzc-k-01-0-UI.s1.3 |
| Conread position: | 311-684 |
| Cow position: | chr28:10458957-10458589 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 279 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 177 |
| Conread position: | 333-684 |
| Cow position: | chr28:6777714-6777364 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 219 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 92, 164 |
| Conread position: | 333-684 |
| Cow position: | chr28:9714300-9713950 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 5, 51 |
| Conread position: | 335-679 |
| Cow position: | chr28:23673972-23674315 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 7, 167 |
| Conread position: | 336-684 |
| Cow position: | chr28:14190380-14190041 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 29 |
| Conread position: | 337-646 |
| Cow position: | chr28:10579563-10579255 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 224 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 87, 151 |
| Conread position: | 337-663 |
| Cow position: | chr28:27935594-27935260 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 229 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 19, 103 |
| Conread position: | 338-460 |
| Cow position: | chr28:10293770-10293889 (view UCSC Genome Browser custom track) |
| Alignm length: | 123 |
| Alignm identity: | 99 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 338-479 |
| Cow position: | chr28:24560210-24560352 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 78, 118 |
| Conread position: | 338-493 |
| Cow position: | chr28:10161002-10161158 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 114 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 338-505 |
| Cow position: | chr28:15674614-15674776 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 121 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 338-525 |
| Cow position: | chr28:30806068-30806255 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 83, 165 |
| Conread position: | 338-531 |
| Cow position: | chr28:25675704-25675512 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 83, 150 |
| Conread position: | 338-545 |
| Cow position: | chr28:8785732-8785940 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 156 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 84, 150 |
| Conread position: | 338-545 |
| Cow position: | chr28:26423964-26423761 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 82, 109 |
| Conread position: | 338-548 |
| Cow position: | chr28:21941287-21941081 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 338-558 |
| Cow position: | chr28:13723535-13723738 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 16, 23 |
| Conread position: | 338-563 |
| Cow position: | chr28:21894249-21894469 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 83, 48 |
| Conread position: | 338-583 |
| Cow position: | chr28:25025874-25026120 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 180 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 83, 33 |
| Conread position: | 338-596 |
| Cow position: | chr28:3013669-3013415 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 193 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 207, 85 |
| Conread position: | 338-602 |
| Cow position: | chr28:32790085-32789824 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 196 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 26, 15 |
| Conread position: | 338-616 |
| Cow position: | chr28:27241350-27241072 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 165, 72 |
| Conread position: | 338-627 |
| Cow position: | chr28:15588412-15588693 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 213 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 78, 33 |
| Conread position: | 338-627 |
| Cow position: | chr28:32303931-32303634 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 215 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 85, 44 |
| Conread position: | 338-627 |
| Cow position: | chr28:32588734-32588445 (view UCSC Genome Browser custom track) |
| Alignm length: | 293 |
| Alignm identity: | 214 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 150 |
| Conread position: | 338-652 |
| Cow position: | chr28:2363890-2363577 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 216 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 82, 92 |
| Conread position: | 338-656 |
| Cow position: | chr28:1812635-1812326 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 221 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 78, 104 |
| Conread position: | 338-666 |
| Cow position: | chr28:31849624-31849301 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 26, 164 |
| Conread position: | 338-668 |
| Cow position: | chr28:3189946-3189615 (view UCSC Genome Browser custom track) |
| Alignm length: | 335 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 150 |
| Conread position: | 338-670 |
| Cow position: | chr28:34084218-34083899 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 46 |
| Conread position: | 338-673 |
| Cow position: | chr28:27957430-27957092 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 237 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 78, 149 |
| Conread position: | 338-681 |
| Cow position: | chr28:30959912-30960251 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 149 |
| Conread position: | 338-681 |
| Cow position: | chr28:34582218-34582561 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 150 |
| Conread position: | 338-682 |
| Cow position: | chr28:10302140-10302477 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 107 |
| Conread position: | 338-683 |
| Cow position: | chr28:2644013-2644358 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 150 |
| Conread position: | 338-683 |
| Cow position: | chr28:6536497-6536157 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 13 |
| Conread position: | 338-683 |
| Cow position: | chr28:7828796-7829149 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 261 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 82, 124 |
| Conread position: | 338-683 |
| Cow position: | chr28:25849336-25848991 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 150 |
| Conread position: | 338-683 |
| Cow position: | chr28:28928130-28928472 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 109 |
| Conread position: | 338-683 |
| Cow position: | chr28:29760328-29759988 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 272 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 159 |
| Conread position: | 338-684 |
| Cow position: | chr28:784967-785306 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 16 |
| Conread position: | 338-684 |
| Cow position: | chr28:957186-957528 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 237 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 82, 151 |
| Conread position: | 338-684 |
| Cow position: | chr28:1165589-1165245 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 150 |
| Conread position: | 338-684 |
| Cow position: | chr28:1215533-1215190 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 104 |
| Conread position: | 338-684 |
| Cow position: | chr28:1385132-1384798 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 77 |
| Conread position: | 338-684 |
| Cow position: | chr28:1955666-1956009 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 150 |
| Conread position: | 338-684 |
| Cow position: | chr28:5112421-5112078 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 109 |
| Conread position: | 338-684 |
| Cow position: | chr28:5210419-5210762 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 109 |
| Conread position: | 338-684 |
| Cow position: | chr28:5338399-5338056 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 109 |
| Conread position: | 338-684 |
| Cow position: | chr28:5636136-5636470 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 74 |
| Conread position: | 338-684 |
| Cow position: | chr28:5749401-5749063 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 43 |
| Conread position: | 338-684 |
| Cow position: | chr28:7004303-7004648 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 152 |
| Conread position: | 338-684 |
| Cow position: | chr28:7335287-7335629 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 160 |
| Conread position: | 338-684 |
| Cow position: | chr28:7743439-7743782 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 104 |
| Conread position: | 338-684 |
| Cow position: | chr28:8381343-8381687 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 150 |
| Conread position: | 338-684 |
| Cow position: | chr28:8718668-8718331 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 209, 74 |
| Conread position: | 338-684 |
| Cow position: | chr28:9181170-9181515 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 256 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 155 |
| Conread position: | 338-684 |
| Cow position: | chr28:10471951-10472290 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 247 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 50 |
| Conread position: | 338-684 |
| Cow position: | chr28:10616745-10616401 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 259 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 82, 108 |
| Conread position: | 338-684 |
| Cow position: | chr28:12407915-12407573 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 56 |
| Conread position: | 338-684 |
| Cow position: | chr28:13462266-13462604 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 15 |
| Conread position: | 338-684 |
| Cow position: | chr28:15033784-15033438 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 244 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 26, 15 |
| Conread position: | 338-684 |
| Cow position: | chr28:15685707-15686047 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 108 |
| Conread position: | 338-684 |
| Cow position: | chr28:15918226-15917882 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 121 |
| Conread position: | 338-684 |
| Cow position: | chr28:16596628-16596960 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 106 |
| Conread position: | 338-684 |
| Cow position: | chr28:17390709-17391055 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 260 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 16 |
| Conread position: | 338-684 |
| Cow position: | chr28:17665020-17664682 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 250 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 140 |
| Conread position: | 338-684 |
| Cow position: | chr28:18517848-18517504 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 248 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 39 |
| Conread position: | 338-684 |
| Cow position: | chr28:21378834-21379177 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 20 |
| Conread position: | 338-684 |
| Cow position: | chr28:21568202-21568547 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 269 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 151 |
| Conread position: | 338-684 |
| Cow position: | chr28:21628986-21629322 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 228 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 287, 20 |
| Conread position: | 338-684 |
| Cow position: | chr28:22041095-22040768 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 255 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 83 |
| Conread position: | 338-684 |
| Cow position: | chr28:22231030-22230688 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 208, 83 |
| Conread position: | 338-684 |
| Cow position: | chr28:22579033-22579379 (view UCSC Genome Browser custom track) |
| Alignm length: | 355 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 144 |
| Conread position: | 338-684 |
| Cow position: | chr28:23311008-23310673 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 127, 83 |
| Conread position: | 338-684 |
| Cow position: | chr28:24591168-24591514 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 160 |
| Conread position: | 338-684 |
| Cow position: | chr28:24885155-24885501 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 258 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 150 |
| Conread position: | 338-684 |
| Cow position: | chr28:25167855-25167511 (view UCSC Genome Browser custom track) |
| Alignm length: | 353 |
| Alignm identity: | 246 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 26, 16 |
| Conread position: | 338-684 |
| Cow position: | chr28:25702594-25702266 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 244 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 209, 70 |
| Conread position: | 338-684 |
| Cow position: | chr28:28470317-28470663 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 150 |
| Conread position: | 338-684 |
| Cow position: | chr28:29037350-29037004 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 249 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 160 |
| Conread position: | 338-684 |
| Cow position: | chr28:29822490-29822828 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 246 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 210, 85 |
| Conread position: | 338-684 |
| Cow position: | chr28:30097172-30097518 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 253 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 160 |
| Conread position: | 338-684 |
| Cow position: | chr28:30534767-30534421 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 257 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 160 |
| Conread position: | 338-684 |
| Cow position: | chr28:34596541-34596887 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 254 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 160 |
| Conread position: | 339-644 |
| Cow position: | chr28:14510608-14510910 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 210 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 53, 157 |
| Conread position: | 339-684 |
| Cow position: | chr28:17372253-17371936 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 238 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 208, 5 |
| Conread position: | 341-473 |
| Cow position: | chr28:34730232-34730366 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 341-656 |
| Cow position: | chr28:21323377-21323689 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 170, 82 |
| Conread position: | 341-665 |
| Cow position: | chr28:6813204-6812876 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 222 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 81, 104 |
| Conread position: | 341-684 |
| Cow position: | chr28:2086770-2087105 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 238 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 75, 101 |
| Conread position: | 341-684 |
| Cow position: | chr28:5939790-5940125 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 243 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 105 |
| Conread position: | 341-684 |
| Cow position: | chr28:10598979-10599317 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 5 |
| Conread position: | 341-684 |
| Cow position: | chr28:10644176-10643841 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 252 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 266, 67 |
| Conread position: | 343-492 |
| Cow position: | chr28:6231518-6231370 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 344-673 |
| Cow position: | chr28:11503929-11503588 (view UCSC Genome Browser custom track) |
| Alignm length: | 348 |
| Alignm identity: | 251 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 109 |
| Conread position: | 346-604 |
| Cow position: | chr28:14625264-14625525 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 18, 11 |
| Conread position: | 347-506 |
| Cow position: | chr28:24488456-24488615 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 5, 55 |
| Conread position: | 347-684 |
| Cow position: | chr28:9443932-9443617 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 234 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 350-531 |
| Cow position: | chr28:7027462-7027288 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 350-683 |
| Cow position: | chr28:15575399-15575718 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 227 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 350-684 |
| Cow position: | chr28:1774142-1774463 (view UCSC Genome Browser custom track) |
| Alignm length: | 338 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 197, 66 |
| Conread position: | 356-684 |
| Cow position: | chr28:24669914-24670225 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 46 |
| Conread position: | 360-636 |
| Cow position: | chr28:22324993-22325261 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 189 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 162, 81 |
| Conread position: | 360-684 |
| Cow position: | chr28:1507188-1507516 (view UCSC Genome Browser custom track) |
| Alignm length: | 329 |
| Alignm identity: | 245 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 361-602 |
| Cow position: | chr28:12152677-12152918 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-39 |
| Alignm gaps (pig, cow): | 55, 127 |
| Conread position: | 362-639 |
| Cow position: | chr28:34409351-34409078 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 201 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 59, 99 |
| Conread position: | 363-674 |
| Cow position: | chr28:6061115-6061416 (view UCSC Genome Browser custom track) |
| Alignm length: | 315 |
| Alignm identity: | 230 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 21 |
| Conread position: | 363-676 |
| Cow position: | chr28:25772246-25772564 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 53, 73 |
| Conread position: | 363-681 |
| Cow position: | chr28:11047905-11048219 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 220 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 102, 52 |
| Conread position: | 363-684 |
| Cow position: | chr28:6958553-6958873 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 229 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 106 |
| Conread position: | 363-684 |
| Cow position: | chr28:13605629-13605949 (view UCSC Genome Browser custom track) |
| Alignm length: | 333 |
| Alignm identity: | 227 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 52, 132 |
| Conread position: | 363-684 |
| Cow position: | chr28:33254642-33254963 (view UCSC Genome Browser custom track) |
| Alignm length: | 326 |
| Alignm identity: | 237 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 53, 135 |
| Conread position: | 363-684 |
| Cow position: | chr28:33638889-33639210 (view UCSC Genome Browser custom track) |
| Alignm length: | 325 |
| Alignm identity: | 234 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 135 |
| Conread position: | 364-639 |
| Cow position: | chr28:22310384-22310651 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 187 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 158, 77 |
| Conread position: | 364-673 |
| Cow position: | chr28:2620275-2619981 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 123 |
| Conread position: | 364-682 |
| Cow position: | chr28:33767355-33767656 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 213 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 183, 59 |
| Conread position: | 364-684 |
| Cow position: | chr28:8966681-8966381 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 214 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 247, 38 |
| Conread position: | 365-683 |
| Cow position: | chr28:11788267-11787956 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 241 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 181, 58 |
| Conread position: | 366-553 |
| Cow position: | chr28:918241-918053 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 54, 9 |
| Conread position: | 366-553 |
| Cow position: | chr28:933934-933745 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 54, 9 |
| Conread position: | 372-597 |
| Cow position: | chr28:11954422-11954647 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 176 |
| Alignm E-value: | 8.40779e-45 |
| Alignm gaps (pig, cow): | 48, 116 |
| Conread position: | 372-684 |
| Cow position: | chr28:27133201-27132893 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 209 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 53, 121 |
| Conread position: | 374-684 |
| Cow position: | chr28:23024520-23024822 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 45, 114 |
| Conread position: | 377-621 |
| Cow position: | chr28:10576645-10576407 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 170, 46 |
| Conread position: | 382-684 |
| Cow position: | chr28:17600649-17600340 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 220 |
| Alignm E-value: | 7.9874e-44 |
| Alignm gaps (pig, cow): | 32, 105 |
| Conread position: | 393-676 |
| Cow position: | chr28:7689518-7689242 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 189 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 46, 56 |
| Conread position: | 395-614 |
| Cow position: | chr28:5767391-5767608 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 27, 53 |
| Conread position: | 395-684 |
| Cow position: | chr28:15603968-15604255 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 179 |
| Alignm E-value: | 7.00649e-43 |
| Alignm gaps (pig, cow): | 151, 101 |
| Conread position: | 398-630 |
| Cow position: | chr28:7738550-7738781 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 183 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 9 |
| Conread position: | 404-684 |
| Cow position: | chr28:20407092-20407369 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 184 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 17, 84 |
| Conread position: | 410-684 |
| Cow position: | chr28:25562796-25563065 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 10, 79 |
| Conread position: | 411-684 |
| Cow position: | chr28:15939212-15938956 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 189 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 10, 30 |
| Conread position: | 411-684 |
| Cow position: | chr28:20266146-20265876 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 197 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 10, 75 |
| Conread position: | 415-683 |
| Cow position: | chr28:483334-483068 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 203 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 134, 81 |
| Conread position: | 416-684 |
| Cow position: | chr28:8683799-8683522 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 191 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 89, 28 |
| Conread position: | 417-668 |
| Cow position: | chr28:25163982-25164224 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 130, 75 |
| Conread position: | 423-684 |
| Cow position: | chr28:6843269-6842999 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 8, 211 |
| Conread position: | 436-684 |
| Cow position: | chr28:26986636-26986392 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 112, 57 |
| Conread position: | 440-681 |
| Cow position: | chr28:3460936-3461167 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 177 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 107, 44 |
| Conread position: | 445-684 |
| Cow position: | chr28:525550-525790 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 84, 40 |
| Conread position: | 454-675 |
| Cow position: | chr28:34879624-34879408 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-31 |
| Alignm gaps (pig, cow): | 93, 31 |
| Conread position: | 464-683 |
| Cow position: | chr28:22258743-22258526 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 84, 37 |
| Conread position: | 465-683 |
| Cow position: | chr28:1197548-1197760 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 83, 21 |
| Conread position: | 466-683 |
| Cow position: | chr28:14110495-14110710 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-36 |
| Alignm gaps (pig, cow): | 80, 30 |
| Conread position: | 468-684 |
| Cow position: | chr28:24621415-24621201 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 133, 44 |
| Conread position: | 475-684 |
| Cow position: | chr28:28358344-28358143 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 71, 10 |
| Conread position: | 481-684 |
| Cow position: | chr28:28764398-28764194 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 9, 13 |
| Conread position: | 487-684 |
| Cow position: | chr28:1025886-1025688 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 58, 23 |
| Conread position: | 494-683 |
| Cow position: | chr28:3626496-3626681 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 133 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 77, 40 |
| Conread position: | 494-684 |
| Cow position: | chr28:6231230-6231045 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 47, 19 |
| Conread position: | 496-684 |
| Cow position: | chr28:34730366-34730554 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-32 |
| Alignm gaps (pig, cow): | 50, 14 |
| Conread position: | 512-675 |
| Cow position: | chr28:11545006-11544840 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 516-673 |
| Cow position: | chr28:10293907-10294065 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 32, 121 |
| Conread position: | 516-684 |
| Cow position: | chr28:20935942-20935774 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 32, 73 |
| Conread position: | 520-684 |
| Cow position: | chr28:5816129-5816293 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 28, 147 |
| Conread position: | 540-674 |
| Cow position: | chr28:5824332-5824468 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 104 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 549-684 |
| Cow position: | chr28:13724389-13724525 (view UCSC Genome Browser custom track) |
| Alignm length: | 137 |
| Alignm identity: | 106 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 133, 0 |
| Conread position: | 564-684 |
| Cow position: | chr28:25026399-25026518 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 45, 0 |
Show alignments to all cow chromosomes.