Cow genome map


           Conread name:
           Ss1.1-mCP1-MI-P-CP1-nzc-k-09-0-UI.s1.3.5
        

               Conread position:
               1-112
               

               Cow position:
               chr5:76002241-76002352 (view UCSC Genome Browser custom track)
               

               Alignm length:
               112
               

               Alignm identity:
               107
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               105-239
               

               Cow position:
               chr5:76002416-76002550 (view UCSC Genome Browser custom track)
               

               Alignm length:
               135
               

               Alignm identity:
               125
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               296-406
               

               Cow position:
               chr5:76005632-76005742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               111
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               470-599
               

               Cow position:
               chr5:76006616-76006744 (view UCSC Genome Browser custom track)
               

               Alignm length:
               130
               

               Alignm identity:
               113
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               483-601
               

               Cow position:
               chr5:75997442-75997561 (view UCSC Genome Browser custom track)
               

               Alignm length:
               120
               

               Alignm identity:
               95
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               672-755
               

               Cow position:
               chr5:76007173-76007256 (view UCSC Genome Browser custom track)
               

               Alignm length:
               84
               

               Alignm identity:
               75
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               746-830
               

               Cow position:
               chr5:76007317-76007401 (view UCSC Genome Browser custom track)
               

               Alignm length:
               85
               

               Alignm identity:
               78
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               823-1007
               

               Cow position:
               chr5:75998604-75998788 (view UCSC Genome Browser custom track)
               

               Alignm length:
               186
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               97, 92
               

               Conread position:
               830-1007
               

               Cow position:
               chr5:76007478-76007655 (view UCSC Genome Browser custom track)
               

               Alignm length:
               178
               

               Alignm identity:
               162
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1005-1447
               

               Cow position:
               chr5:76009490-76009929 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               361, 106
               
Show alignments to all cow chromosomes.