Cow genome map

Conread name: Ss1.1-mCP1-MI-P-CP1-nzc-p-10-0-UI.s1.3

Conread position: 1-448
Cow position: chr21:28873732-28874171 (view UCSC Genome Browser custom track)
Alignm length: 448
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 0

Conread position: 16-583
Cow position: chr21:18820957-18820393 (view UCSC Genome Browser custom track)
Alignm length: 578
Alignm identity: 441
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 218

Conread position: 17-211
Cow position: chr21:23809053-23809246 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 137
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 15, 93

Conread position: 18-655
Cow position: chr21:358156-358801 (view UCSC Genome Browser custom track)
Alignm length: 659
Alignm identity: 482
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 168

Conread position: 279-565
Cow position: chr21:36713831-36714104 (view UCSC Genome Browser custom track)
Alignm length: 290
Alignm identity: 199
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 50, 58

Conread position: 279-568
Cow position: chr21:26617214-26616938 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 203
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 17, 91

Conread position: 281-657
Cow position: chr21:35089105-35089481 (view UCSC Genome Browser custom track)
Alignm length: 387
Alignm identity: 267
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 185, 50

Conread position: 286-576
Cow position: chr21:33754718-33754997 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 202
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 258, 50

Conread position: 307-571
Cow position: chr21:25286039-25286309 (view UCSC Genome Browser custom track)
Alignm length: 278
Alignm identity: 192
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 29, 64

Conread position: 335-565
Cow position: chr21:46908621-46908393 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 129, 25

Conread position: 368-552
Cow position: chr21:4076363-4076550 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 134
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 102, 144

Conread position: 375-716
Cow position: chr21:4590469-4590124 (view UCSC Genome Browser custom track)
Alignm length: 354
Alignm identity: 230
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 99, 5

Conread position: 380-552
Cow position: chr21:3614825-3615003 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 135

Conread position: 380-566
Cow position: chr21:34292315-34292501 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 11, 129

Conread position: 380-637
Cow position: chr21:4455597-4455848 (view UCSC Genome Browser custom track)
Alignm length: 266
Alignm identity: 187
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 11, 130

Conread position: 380-643
Cow position: chr21:2717154-2716885 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 190
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 11, 118

Conread position: 389-645
Cow position: chr21:4223153-4222909 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 182
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 81, 123

Conread position: 390-559
Cow position: chr21:23809283-23809455 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 79, 132

Conread position: 390-640
Cow position: chr21:34259688-34259431 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 176
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 82, 122

Conread position: 392-565
Cow position: chr21:13124454-13124276 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 79, 122

Conread position: 392-640
Cow position: chr21:35595906-35596162 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 176
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 83, 120

Conread position: 392-640
Cow position: chr21:47939006-47939260 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 178
Alignm E-value: 6e-26
Alignm gaps (pig, cow): 83, 102

Conread position: 392-657
Cow position: chr21:2542362-2542094 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 194
Alignm E-value: 4e-33
Alignm gaps (pig, cow): 78, 122

Conread position: 400-657
Cow position: chr21:2884212-2883956 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 183
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 62, 112

Conread position: 428-664
Cow position: chr21:41952730-41952967 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 180
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 46, 87

Conread position: 434-649
Cow position: chr21:4183082-4183312 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 38, 158

Show alignments to all cow chromosomes.