Cow genome map


           Conread name:
           Ss1.1-mCP1-MI-P-CP1-nzc-p-10-0-UI.s1.3
        

               Conread position:
               21-160
               

               Cow position:
               chr27:25116419-25116559 (view UCSC Genome Browser custom track)
               

               Alignm length:
               141
               

               Alignm identity:
               103
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               279-648
               

               Cow position:
               chr27:27198607-27198232 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               256
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               85, 167
               

               Conread position:
               299-648
               

               Cow position:
               chr27:25999795-25999451 (view UCSC Genome Browser custom track)
               

               Alignm length:
               357
               

               Alignm identity:
               246
               

               Alignm E-value:
               6e-40
               

               Alignm gaps (pig, cow):
               246, 37
               

               Conread position:
               325-566
               

               Cow position:
               chr27:3997108-3996864 (view UCSC Genome Browser custom track)
               

               Alignm length:
               249
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               45, 157
               

               Conread position:
               380-640
               

               Cow position:
               chr27:16438679-16438943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               181
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               11, 132
               

               Conread position:
               385-657
               

               Cow position:
               chr27:25116586-25116859 (view UCSC Genome Browser custom track)
               

               Alignm length:
               279
               

               Alignm identity:
               197
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               86, 130
               

               Conread position:
               386-657
               

               Cow position:
               chr27:26556650-26556369 (view UCSC Genome Browser custom track)
               

               Alignm length:
               286
               

               Alignm identity:
               207
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               10, 130
               

               Conread position:
               389-643
               

               Cow position:
               chr27:27051032-27051276 (view UCSC Genome Browser custom track)
               

               Alignm length:
               261
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               80, 35
               

               Conread position:
               392-614
               

               Cow position:
               chr27:25003154-25002937 (view UCSC Genome Browser custom track)
               

               Alignm length:
               229
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               78, 102
               

               Conread position:
               421-648
               

               Cow position:
               chr27:5985728-5985495 (view UCSC Genome Browser custom track)
               

               Alignm length:
               238
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               50, 92
               
Show alignments to all cow chromosomes.