Cow genome map
| Conread name: | Ss1.1-mCP1-MI-P-CP1-nzc-p-10-0-UI.s1.3 |
| Conread position: | 1-330 |
| Cow position: | chr8:27091993-27091681 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 239 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 186, 17 |
| Conread position: | 1-648 |
| Cow position: | chr8:45162159-45161510 (view UCSC Genome Browser custom track) |
| Alignm length: | 668 |
| Alignm identity: | 474 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 31, 18 |
| Conread position: | 5-276 |
| Cow position: | chr8:25541330-25541601 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 200 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 13, 99 |
| Conread position: | 17-657 |
| Cow position: | chr8:44692536-44693158 (view UCSC Genome Browser custom track) |
| Alignm length: | 655 |
| Alignm identity: | 478 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 18, 169 |
| Conread position: | 20-372 |
| Cow position: | chr8:38608579-38608235 (view UCSC Genome Browser custom track) |
| Alignm length: | 356 |
| Alignm identity: | 266 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 12, 136 |
| Conread position: | 38-269 |
| Cow position: | chr8:8905686-8905456 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 193, 126 |
| Conread position: | 53-195 |
| Cow position: | chr8:24421379-24421238 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 176-657 |
| Cow position: | chr8:53426705-53427189 (view UCSC Genome Browser custom track) |
| Alignm length: | 495 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 59, 134 |
| Conread position: | 262-657 |
| Cow position: | chr8:25542075-25542450 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 287 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 204, 54 |
| Conread position: | 275-410 |
| Cow position: | chr8:50752792-50752925 (view UCSC Genome Browser custom track) |
| Alignm length: | 136 |
| Alignm identity: | 102 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 275-657 |
| Cow position: | chr8:13735127-13735505 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 282 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 73 |
| Conread position: | 279-666 |
| Cow position: | chr8:12664546-12664160 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 255 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 63, 23 |
| Conread position: | 280-639 |
| Cow position: | chr8:42466886-42467237 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 255 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 265, 89 |
| Conread position: | 281-575 |
| Cow position: | chr8:45693903-45693607 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 211 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 179, 89 |
| Conread position: | 318-649 |
| Cow position: | chr8:8904977-8904653 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 247 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 157, 13 |
| Conread position: | 335-656 |
| Cow position: | chr8:23766809-23766496 (view UCSC Genome Browser custom track) |
| Alignm length: | 327 |
| Alignm identity: | 231 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 131, 35 |
| Conread position: | 350-656 |
| Cow position: | chr8:11590195-11590492 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 231 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 193, 20 |
| Conread position: | 369-645 |
| Cow position: | chr8:42658887-42658621 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 94, 141 |
| Conread position: | 377-666 |
| Cow position: | chr8:9540927-9540625 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 220 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 14, 49 |
| Conread position: | 380-565 |
| Cow position: | chr8:45317522-45317333 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 11, 133 |
| Conread position: | 380-657 |
| Cow position: | chr8:47884587-47884879 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 208 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 11, 70 |
| Conread position: | 381-655 |
| Cow position: | chr8:44077442-44077169 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 200 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 10, 127 |
| Conread position: | 382-645 |
| Cow position: | chr8:38607944-38607682 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 212 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 84, 129 |
| Conread position: | 386-657 |
| Cow position: | chr8:33429507-33429771 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 203 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 8, 140 |
| Conread position: | 392-640 |
| Cow position: | chr8:45188675-45188927 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 68, 100 |
| Conread position: | 392-642 |
| Cow position: | chr8:61036301-61036058 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 74, 122 |
| Conread position: | 392-657 |
| Cow position: | chr8:11800824-11801095 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 35, 41 |
| Conread position: | 392-657 |
| Cow position: | chr8:19229391-19229661 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 202 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 78, 120 |
| Conread position: | 392-664 |
| Cow position: | chr8:27984222-27983940 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 194 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 71, 119 |
| Conread position: | 394-657 |
| Cow position: | chr8:42162060-42161796 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 204 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 76, 120 |
| Conread position: | 402-648 |
| Cow position: | chr8:11970966-11970718 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 181 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 94, 108 |
| Conread position: | 422-657 |
| Cow position: | chr8:24421161-24420933 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 47, 96 |
Show alignments to all cow chromosomes.