Cow genome map


           Conread name:
           Ss1.1-mCP1-MI-P-CP1-nzd-f-18-0-UI.s1.3
        

               Conread position:
               2-300
               

               Cow position:
               chr3:83852272-83851974 (view UCSC Genome Browser custom track)
               

               Alignm length:
               302
               

               Alignm identity:
               196
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               174, 215
               

               Conread position:
               7-312
               

               Cow position:
               chr3:83852252-83851944 (view UCSC Genome Browser custom track)
               

               Alignm length:
               312
               

               Alignm identity:
               208
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               170, 213
               

               Conread position:
               8-322
               

               Cow position:
               chr3:83852131-83851826 (view UCSC Genome Browser custom track)
               

               Alignm length:
               315
               

               Alignm identity:
               228
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               158, 0
               

               Conread position:
               23-293
               

               Cow position:
               chr3:83852206-83851933 (view UCSC Genome Browser custom track)
               

               Alignm length:
               274
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               154, 0
               

               Conread position:
               312-579
               

               Cow position:
               chr3:83850136-83849869 (view UCSC Genome Browser custom track)
               

               Alignm length:
               268
               

               Alignm identity:
               231
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               679-845
               

               Cow position:
               chr3:83838826-83838660 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               140
               

               Alignm E-value:
               6.02558e-44
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               840-1648
               

               Cow position:
               chr3:83837328-83836520 (view UCSC Genome Browser custom track)
               

               Alignm length:
               826
               

               Alignm identity:
               666
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 105
               
Show alignments to all cow chromosomes.