Cow genome map


           Conread name:
           Ss1.1-mCP1-MI-P-CP1-nzd-n-12-0-UI.s1.3
        

               Conread position:
               77-204
               

               Cow position:
               chr7:18350735-18350609 (view UCSC Genome Browser custom track)
               

               Alignm length:
               128
               

               Alignm identity:
               111
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               199-312
               

               Cow position:
               chr7:18350029-18349916 (view UCSC Genome Browser custom track)
               

               Alignm length:
               114
               

               Alignm identity:
               102
               

               Alignm E-value:
               6e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               310-397
               

               Cow position:
               chr7:18349767-18349680 (view UCSC Genome Browser custom track)
               

               Alignm length:
               88
               

               Alignm identity:
               79
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               395-507
               

               Cow position:
               chr7:18348776-18348666 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               494-601
               

               Cow position:
               chr7:18348365-18348258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               108
               

               Alignm identity:
               97
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               601-739
               

               Cow position:
               chr7:18347486-18347348 (view UCSC Genome Browser custom track)
               

               Alignm length:
               139
               

               Alignm identity:
               127
               

               Alignm E-value:
               7.00649e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               842-932
               

               Cow position:
               chr7:18344689-18344599 (view UCSC Genome Browser custom track)
               

               Alignm length:
               91
               

               Alignm identity:
               87
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               932-1044
               

               Cow position:
               chr7:18344410-18344298 (view UCSC Genome Browser custom track)
               

               Alignm length:
               113
               

               Alignm identity:
               103
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1057-1880
               

               Cow position:
               chr7:18344204-18343324 (view UCSC Genome Browser custom track)
               

               Alignm length:
               896
               

               Alignm identity:
               639
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               166, 124
               

               Conread position:
               1952-2195
               

               Cow position:
               chr7:18343303-18343067 (view UCSC Genome Browser custom track)
               

               Alignm length:
               251
               

               Alignm identity:
               177
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               19, 29
               
Show alignments to all cow chromosomes.