Cow genome map
| Conread name: | Ss1.1-mE6-MI-P-E6-ahl-d-11-1-UM.s1.3 |
| Conread position: | 5-187 |
| Cow position: | chr18:35367225-35367043 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 29, 17 |
| Conread position: | 12-162 |
| Cow position: | chr18:44206107-44205955 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 115 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 13, 27 |
| Conread position: | 12-164 |
| Cow position: | chr18:22045434-22045275 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 84, 18 |
| Conread position: | 12-174 |
| Cow position: | chr18:23898395-23898561 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 87, 118 |
| Conread position: | 12-180 |
| Cow position: | chr18:19831563-19831730 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 85, 18 |
| Conread position: | 14-164 |
| Cow position: | chr18:42427599-42427752 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 102, 135 |
| Conread position: | 14-175 |
| Cow position: | chr18:20318062-20317913 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 152, 24 |
| Conread position: | 14-175 |
| Cow position: | chr18:22120906-22120735 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 84, 119 |
| Conread position: | 14-175 |
| Cow position: | chr18:24946067-24946230 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 132 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 98, 15 |
| Conread position: | 14-180 |
| Cow position: | chr18:10051726-10051901 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 135 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 14-180 |
| Cow position: | chr18:47868589-47868751 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 148, 14 |
| Conread position: | 14-187 |
| Cow position: | chr18:24022597-24022777 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 97, 85 |
| Conread position: | 14-188 |
| Cow position: | chr18:24719292-24719471 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 83, 119 |
| Conread position: | 14-195 |
| Cow position: | chr18:55998611-55998427 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 85, 103 |
| Conread position: | 14-214 |
| Cow position: | chr18:238137-237925 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 84, 180 |
| Conread position: | 14-219 |
| Cow position: | chr18:18843996-18844208 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 82, 34 |
| Conread position: | 14-220 |
| Cow position: | chr18:51691483-51691274 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 98, 152 |
| Conread position: | 15-126 |
| Cow position: | chr18:19273116-19273003 (view UCSC Genome Browser custom track) |
| Alignm length: | 114 |
| Alignm identity: | 92 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 15-144 |
| Cow position: | chr18:17005240-17005368 (view UCSC Genome Browser custom track) |
| Alignm length: | 130 |
| Alignm identity: | 102 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 15-157 |
| Cow position: | chr18:3518248-3518393 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 43, 17 |
| Conread position: | 15-159 |
| Cow position: | chr18:18918978-18918832 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 112 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 83, 33 |
| Conread position: | 15-160 |
| Cow position: | chr18:2774158-2774004 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 15-160 |
| Cow position: | chr18:32253529-32253378 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 85, 47 |
| Conread position: | 15-164 |
| Cow position: | chr18:5632248-5632401 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 15-164 |
| Cow position: | chr18:9846430-9846283 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 75, 92 |
| Conread position: | 15-164 |
| Cow position: | chr18:11867317-11867474 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 15-164 |
| Cow position: | chr18:14172227-14172077 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 116 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 103, 22 |
| Conread position: | 15-164 |
| Cow position: | chr18:14586490-14586343 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 15-164 |
| Cow position: | chr18:20174149-20174001 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 84, 102 |
| Conread position: | 15-164 |
| Cow position: | chr18:34490260-34490417 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 36, 122 |
| Conread position: | 15-164 |
| Cow position: | chr18:35795242-35795084 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 15-164 |
| Cow position: | chr18:37188017-37187858 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 123 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 15-164 |
| Cow position: | chr18:37303132-37303290 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 119 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 83, 122 |
| Conread position: | 15-164 |
| Cow position: | chr18:39623780-39623940 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 130 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 15-164 |
| Cow position: | chr18:43125066-43125213 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 110 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 15-164 |
| Cow position: | chr18:50974314-50974149 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 15-164 |
| Cow position: | chr18:51395905-51395758 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 15-164 |
| Cow position: | chr18:51643385-51643233 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 102, 80 |
| Conread position: | 15-166 |
| Cow position: | chr18:20175214-20175056 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 84, 58 |
| Conread position: | 15-168 |
| Cow position: | chr18:26355048-26354901 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 115 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 15-168 |
| Cow position: | chr18:39460200-39460357 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 15-168 |
| Cow position: | chr18:39662759-39662921 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 83, 72 |
| Conread position: | 15-173 |
| Cow position: | chr18:47920726-47920892 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 131 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 85, 156 |
| Conread position: | 15-174 |
| Cow position: | chr18:47565807-47565964 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 128 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 106, 16 |
| Conread position: | 15-174 |
| Cow position: | chr18:51192760-51192599 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 124 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 15-175 |
| Cow position: | chr18:135674-135510 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 101, 48 |
| Conread position: | 15-175 |
| Cow position: | chr18:5647793-5647958 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 122 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 82, 93 |
| Conread position: | 15-175 |
| Cow position: | chr18:8208445-8208273 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 134 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 15-175 |
| Cow position: | chr18:19640952-19641124 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 15-175 |
| Cow position: | chr18:23380111-23380277 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 83, 127 |
| Conread position: | 15-175 |
| Cow position: | chr18:28297885-28297733 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 6, 86 |
| Conread position: | 15-175 |
| Cow position: | chr18:28657931-28657769 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 82, 155 |
| Conread position: | 15-175 |
| Cow position: | chr18:32600032-32600204 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 83, 159 |
| Conread position: | 15-175 |
| Cow position: | chr18:49161323-49161150 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 15-175 |
| Cow position: | chr18:55499052-55499220 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 83, 53 |
| Conread position: | 15-176 |
| Cow position: | chr18:4758052-4757883 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 83, 22 |
| Conread position: | 15-180 |
| Cow position: | chr18:1144203-1144037 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 101, 30 |
| Conread position: | 15-180 |
| Cow position: | chr18:2108227-2108403 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 82, 131 |
| Conread position: | 15-180 |
| Cow position: | chr18:31159293-31159117 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 81, 148 |
| Conread position: | 15-180 |
| Cow position: | chr18:38937801-38937975 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 76, 82 |
| Conread position: | 15-180 |
| Cow position: | chr18:41702817-41702989 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 75, 22 |
| Conread position: | 15-180 |
| Cow position: | chr18:46048732-46048909 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 132 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 15-180 |
| Cow position: | chr18:47416982-47417155 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 85, 53 |
| Conread position: | 15-180 |
| Cow position: | chr18:49038442-49038609 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 71, 150 |
| Conread position: | 15-180 |
| Cow position: | chr18:51757074-51757249 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 133 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 83, 55 |
| Conread position: | 15-180 |
| Cow position: | chr18:52251877-52251699 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 15-180 |
| Cow position: | chr18:53053254-53053074 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 15-181 |
| Cow position: | chr18:50359312-50359481 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 81, 96 |
| Conread position: | 15-188 |
| Cow position: | chr18:12273638-12273817 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 84, 140 |
| Conread position: | 15-197 |
| Cow position: | chr18:7109110-7109304 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 15-197 |
| Cow position: | chr18:10322786-10322968 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 81, 93 |
| Conread position: | 15-197 |
| Cow position: | chr18:45558127-45558314 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 24, 172 |
| Conread position: | 15-201 |
| Cow position: | chr18:3211858-3212055 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 83, 178 |
| Conread position: | 15-206 |
| Cow position: | chr18:45573360-45573561 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 149 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 80, 119 |
| Conread position: | 15-212 |
| Cow position: | chr18:51405926-51405731 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 102, 53 |
| Conread position: | 15-217 |
| Cow position: | chr18:4668518-4668316 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 68, 14 |
| Conread position: | 15-217 |
| Cow position: | chr18:7956128-7956334 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 90, 159 |
| Conread position: | 15-217 |
| Cow position: | chr18:14871629-14871406 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 23, 55 |
| Conread position: | 15-218 |
| Cow position: | chr18:52382884-52383099 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 90, 179 |
| Conread position: | 15-221 |
| Cow position: | chr18:21782671-21782886 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 90, 17 |
| Conread position: | 15-222 |
| Cow position: | chr18:39811603-39811391 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 83, 161 |
| Conread position: | 15-223 |
| Cow position: | chr18:49970673-49970454 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 83, 178 |
| Conread position: | 15-231 |
| Cow position: | chr18:45185852-45186081 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 85, 155 |
| Conread position: | 15-234 |
| Cow position: | chr18:21751355-21751588 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 9, 181 |
| Conread position: | 15-247 |
| Cow position: | chr18:7963761-7964002 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 80, 172 |
| Conread position: | 16-168 |
| Cow position: | chr18:31672531-31672378 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 81, 38 |
| Conread position: | 16-180 |
| Cow position: | chr18:2144552-2144725 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 16-180 |
| Cow position: | chr18:42290346-42290179 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 126 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 146, 0 |
| Conread position: | 16-180 |
| Cow position: | chr18:42293074-42292907 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 146, 0 |
| Conread position: | 16-187 |
| Cow position: | chr18:47486025-47486208 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 16-192 |
| Cow position: | chr18:40047517-40047338 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 91, 46 |
| Conread position: | 16-205 |
| Cow position: | chr18:28822771-28822583 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 139 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 151, 91 |
| Conread position: | 16-217 |
| Cow position: | chr18:31973-32183 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 82, 156 |
| Conread position: | 16-229 |
| Cow position: | chr18:31557179-31556956 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 83, 178 |
| Conread position: | 16-239 |
| Cow position: | chr18:23714902-23714679 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 99, 94 |
| Conread position: | 17-159 |
| Cow position: | chr18:24266425-24266272 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 17-160 |
| Cow position: | chr18:23648904-23649058 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 17-164 |
| Cow position: | chr18:4495904-4495754 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 80, 141 |
| Conread position: | 17-164 |
| Cow position: | chr18:24759674-24759523 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 17-175 |
| Cow position: | chr18:12584857-12584694 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 17-175 |
| Cow position: | chr18:50566883-50567054 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 127 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 17-180 |
| Cow position: | chr18:697235-697064 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 17-180 |
| Cow position: | chr18:9896012-9895842 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 17-180 |
| Cow position: | chr18:33492342-33492502 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 131 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 17-180 |
| Cow position: | chr18:38211143-38211314 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 81, 30 |
| Conread position: | 17-180 |
| Cow position: | chr18:49281081-49280908 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 17-184 |
| Cow position: | chr18:26586632-26586453 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 17-186 |
| Cow position: | chr18:40063077-40063255 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 86, 155 |
| Conread position: | 17-188 |
| Cow position: | chr18:23447079-23446893 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 142 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 17-192 |
| Cow position: | chr18:55747668-55747855 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 78, 54 |
| Conread position: | 17-200 |
| Cow position: | chr18:3180393-3180584 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 141 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 99, 173 |
| Conread position: | 17-200 |
| Cow position: | chr18:10214209-10214012 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 41, 0 |
| Conread position: | 17-206 |
| Cow position: | chr18:35827391-35827199 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 81, 23 |
| Conread position: | 17-227 |
| Cow position: | chr18:380914-381107 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 17-233 |
| Cow position: | chr18:4718241-4718468 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 81, 197 |
| Conread position: | 17-234 |
| Cow position: | chr18:24508249-24508023 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 79, 156 |
| Conread position: | 18-164 |
| Cow position: | chr18:25598249-25598097 (view UCSC Genome Browser custom track) |
| Alignm length: | 153 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 18-164 |
| Cow position: | chr18:56181472-56181323 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 79, 60 |
| Conread position: | 18-174 |
| Cow position: | chr18:35874061-35874227 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 128 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 98, 0 |
| Conread position: | 18-175 |
| Cow position: | chr18:8975379-8975542 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 18-175 |
| Cow position: | chr18:15613877-15613714 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 18-175 |
| Cow position: | chr18:19917133-19917289 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 121 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 6, 83 |
| Conread position: | 18-180 |
| Cow position: | chr18:10977227-10977060 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 79, 20 |
| Conread position: | 18-221 |
| Cow position: | chr18:33158925-33159139 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 18-227 |
| Cow position: | chr18:2793988-2793782 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 71, 145 |
| Conread position: | 19-164 |
| Cow position: | chr18:10576095-10576239 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 77, 91 |
| Conread position: | 19-164 |
| Cow position: | chr18:35837639-35837491 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 19-164 |
| Cow position: | chr18:39710090-39710247 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 124 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 19-164 |
| Cow position: | chr18:44909037-44909188 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 116 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 19-164 |
| Cow position: | chr18:56463746-56463592 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 123 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 81, 46 |
| Conread position: | 19-175 |
| Cow position: | chr18:39860787-39860628 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 84, 37 |
| Conread position: | 19-206 |
| Cow position: | chr18:45897716-45897902 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 134 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 88, 14 |
| Conread position: | 19-223 |
| Cow position: | chr18:6005515-6005304 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 79, 149 |
| Conread position: | 19-227 |
| Cow position: | chr18:21528631-21528848 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 61, 161 |
| Conread position: | 19-230 |
| Cow position: | chr18:17195361-17195139 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 79, 171 |
| Conread position: | 19-248 |
| Cow position: | chr18:7965216-7965445 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 172 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 86, 49 |
| Conread position: | 20-164 |
| Cow position: | chr18:23821847-23821693 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 20-164 |
| Cow position: | chr18:48112982-48112830 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 78, 107 |
| Conread position: | 20-175 |
| Cow position: | chr18:37382108-37381941 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 20-180 |
| Cow position: | chr18:5189708-5189536 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 135 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 78, 133 |
| Conread position: | 20-180 |
| Cow position: | chr18:39115133-39114963 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 21-164 |
| Cow position: | chr18:47125414-47125276 (view UCSC Genome Browser custom track) |
| Alignm length: | 144 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 21-167 |
| Cow position: | chr18:19157860-19158016 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 122 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 21-180 |
| Cow position: | chr18:27637478-27637647 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 21-180 |
| Cow position: | chr18:43950812-43950983 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 134 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 22-213 |
| Cow position: | chr18:48713538-48713730 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 141, 78 |
| Conread position: | 23-164 |
| Cow position: | chr18:52387232-52387082 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 119 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 73, 118 |
| Conread position: | 24-211 |
| Cow position: | chr18:19849768-19849587 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 141, 73 |
| Conread position: | 26-188 |
| Cow position: | chr18:35857933-35857762 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 70, 165 |
| Conread position: | 28-187 |
| Cow position: | chr18:35535153-35534988 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 28-207 |
| Cow position: | chr18:42967107-42967287 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 87, 20 |
| Conread position: | 30-164 |
| Cow position: | chr18:53551893-53552023 (view UCSC Genome Browser custom track) |
| Alignm length: | 135 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 31-175 |
| Cow position: | chr18:9596179-9596327 (view UCSC Genome Browser custom track) |
| Alignm length: | 149 |
| Alignm identity: | 111 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 32-164 |
| Cow position: | chr18:18568990-18569114 (view UCSC Genome Browser custom track) |
| Alignm length: | 133 |
| Alignm identity: | 104 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 36-206 |
| Cow position: | chr18:29091739-29091908 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 129, 63 |
| Conread position: | 41-164 |
| Cow position: | chr18:3066350-3066471 (view UCSC Genome Browser custom track) |
| Alignm length: | 124 |
| Alignm identity: | 101 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 41-188 |
| Cow position: | chr18:41253546-41253699 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 120 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 64, 135 |
| Conread position: | 41-211 |
| Cow position: | chr18:36098372-36098543 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 124, 66 |
Show alignments to all cow chromosomes.