Cow genome map

Conread name: Ss1.1-mE6-MI-P-E6-ahl-d-11-1-UM.s1.3

Conread position: 5-183
Cow position: chr8:6224423-6224240 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 37, 17

Conread position: 9-164
Cow position: chr8:26881811-26881647 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 127
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 9-218
Cow position: chr8:45687658-45687447 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 89, 10

Conread position: 12-180
Cow position: chr8:39898717-39898885 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 13, 151

Conread position: 12-187
Cow position: chr8:59056279-59056092 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 134
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 86, 0

Conread position: 12-218
Cow position: chr8:51160542-51160331 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 91, 109

Conread position: 14-126
Cow position: chr8:48955965-48956077 (view UCSC Genome Browser custom track)
Alignm length: 114
Alignm identity: 92
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 25, 68

Conread position: 14-164
Cow position: chr8:4992576-4992730 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 127
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 86, 45

Conread position: 14-164
Cow position: chr8:17199409-17199250 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 126
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 90, 0

Conread position: 14-164
Cow position: chr8:61443192-61443039 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 80, 94

Conread position: 14-175
Cow position: chr8:11124539-11124372 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 136
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 85, 18

Conread position: 14-180
Cow position: chr8:15187273-15187449 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 67, 0

Conread position: 14-180
Cow position: chr8:16500939-16500765 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 14-180
Cow position: chr8:19616339-19616504 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 126
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 82, 23

Conread position: 14-181
Cow position: chr8:8509716-8509894 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 136
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 91, 128

Conread position: 14-181
Cow position: chr8:32457811-32457988 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 131
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 37, 63

Conread position: 14-184
Cow position: chr8:13454601-13454420 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 83, 0

Conread position: 15-105
Cow position: chr8:21222216-21222306 (view UCSC Genome Browser custom track)
Alignm length: 91
Alignm identity: 78
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 15-105
Cow position: chr8:52968286-52968195 (view UCSC Genome Browser custom track)
Alignm length: 92
Alignm identity: 80
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 82, 0

Conread position: 15-122
Cow position: chr8:43985897-43985790 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 88
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 15-150
Cow position: chr8:43163679-43163543 (view UCSC Genome Browser custom track)
Alignm length: 137
Alignm identity: 105
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 15-155
Cow position: chr8:10846263-10846397 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 15-157
Cow position: chr8:15694449-15694302 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 47, 81

Conread position: 15-160
Cow position: chr8:6184215-6184060 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 118
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 88, 0

Conread position: 15-160
Cow position: chr8:16505519-16505664 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 90, 23

Conread position: 15-160
Cow position: chr8:34402319-34402474 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 83, 0

Conread position: 15-162
Cow position: chr8:53429799-53429944 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 118
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 77, 95

Conread position: 15-163
Cow position: chr8:8323846-8323690 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 82, 127

Conread position: 15-164
Cow position: chr8:2375997-2375838 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 80, 0

Conread position: 15-164
Cow position: chr8:4500516-4500668 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 81, 0

Conread position: 15-164
Cow position: chr8:8283276-8283117 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 124
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 81, 0

Conread position: 15-164
Cow position: chr8:11216831-11216678 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 122
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 83, 0

Conread position: 15-164
Cow position: chr8:13118392-13118549 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 62, 0

Conread position: 15-164
Cow position: chr8:16216083-16216239 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 126
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 83, 128

Conread position: 15-164
Cow position: chr8:17046739-17046579 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 20, 0

Conread position: 15-164
Cow position: chr8:19204422-19204263 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 83, 0

Conread position: 15-164
Cow position: chr8:19223635-19223481 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 123
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 83, 0

Conread position: 15-164
Cow position: chr8:19642492-19642647 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 123
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 90, 0

Conread position: 15-164
Cow position: chr8:20107767-20107614 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 15-164
Cow position: chr8:20409712-20409869 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 130
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 86, 62

Conread position: 15-164
Cow position: chr8:21324494-21324336 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 83, 0

Conread position: 15-164
Cow position: chr8:25554805-25554646 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 85, 0

Conread position: 15-164
Cow position: chr8:27731061-27731220 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 127
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 83, 0

Conread position: 15-164
Cow position: chr8:28378743-28378585 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 127
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 90, 126

Conread position: 15-164
Cow position: chr8:39592612-39592771 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 82, 0

Conread position: 15-164
Cow position: chr8:46964759-46964918 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 126
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 83, 0

Conread position: 15-164
Cow position: chr8:60126873-60127026 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 116
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 83, 0

Conread position: 15-165
Cow position: chr8:61067313-61067467 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 86, 23

Conread position: 15-168
Cow position: chr8:20582664-20582501 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 83, 0

Conread position: 15-169
Cow position: chr8:9461173-9461016 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 120
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 47, 151

Conread position: 15-174
Cow position: chr8:16413786-16413620 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 86, 22

Conread position: 15-174
Cow position: chr8:20926607-20926433 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 138
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 83, 0

Conread position: 15-174
Cow position: chr8:28228269-28228432 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 127
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 84, 0

Conread position: 15-175
Cow position: chr8:5672130-5671961 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 83, 40

Conread position: 15-175
Cow position: chr8:24406617-24406448 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 83, 70

Conread position: 15-175
Cow position: chr8:37292066-37291892 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 133
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 86, 0

Conread position: 15-175
Cow position: chr8:38816421-38816588 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 78, 62

Conread position: 15-175
Cow position: chr8:39487613-39487444 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 132
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 79, 154

Conread position: 15-175
Cow position: chr8:45859832-45860005 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 139
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 83, 0

Conread position: 15-175
Cow position: chr8:47057640-47057469 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 137
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 83, 0

Conread position: 15-175
Cow position: chr8:51511827-51511663 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 84, 16

Conread position: 15-178
Cow position: chr8:17247250-17247415 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 84, 104

Conread position: 15-180
Cow position: chr8:642552-642392 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 36, 0

Conread position: 15-180
Cow position: chr8:935729-935905 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 83, 127

Conread position: 15-180
Cow position: chr8:2021155-2020986 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 83, 0

Conread position: 15-180
Cow position: chr8:6477871-6478044 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 132
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 88, 0

Conread position: 15-180
Cow position: chr8:8668163-8667986 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 83, 0

Conread position: 15-180
Cow position: chr8:13479010-13479187 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 135
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 15-180
Cow position: chr8:19475059-19474881 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 138
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 86, 0

Conread position: 15-180
Cow position: chr8:21911660-21911842 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 80, 0

Conread position: 15-180
Cow position: chr8:30324347-30324516 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 129
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 92, 119

Conread position: 15-180
Cow position: chr8:37148334-37148512 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 137
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 83, 0

Conread position: 15-180
Cow position: chr8:37443554-37443722 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 129
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 143, 46

Conread position: 15-180
Cow position: chr8:38665561-38665738 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 5, 0

Conread position: 15-180
Cow position: chr8:45664771-45664935 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 152, 85

Conread position: 15-180
Cow position: chr8:48699997-48700170 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 89, 80

Conread position: 15-180
Cow position: chr8:52870206-52870380 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 88, 25

Conread position: 15-180
Cow position: chr8:53383428-53383594 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 81, 121

Conread position: 15-180
Cow position: chr8:55360588-55360757 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 83, 109

Conread position: 15-180
Cow position: chr8:55725744-55725567 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 139
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 83, 36

Conread position: 15-180
Cow position: chr8:55974792-55974616 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 92, 0

Conread position: 15-180
Cow position: chr8:58520317-58520484 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 127
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 16, 110

Conread position: 15-182
Cow position: chr8:2163880-2163720 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 134
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 146, 85

Conread position: 15-182
Cow position: chr8:53633199-53633027 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 131
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 142, 0

Conread position: 15-186
Cow position: chr8:26625892-26626076 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 141
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 84, 0

Conread position: 15-187
Cow position: chr8:17180010-17179835 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 140
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 83, 74

Conread position: 15-187
Cow position: chr8:42378873-42378690 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 79, 0

Conread position: 15-188
Cow position: chr8:25640077-25639899 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 82, 50

Conread position: 15-192
Cow position: chr8:46874579-46874755 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 135
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 103, 22

Conread position: 15-197
Cow position: chr8:49542906-49543098 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 83, 119

Conread position: 15-197
Cow position: chr8:55348361-55348539 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 81, 22

Conread position: 15-200
Cow position: chr8:522404-522206 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 148
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 83, 0

Conread position: 15-200
Cow position: chr8:11863974-11864164 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 143
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 83, 163

Conread position: 15-200
Cow position: chr8:19784886-19785078 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 150
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 81, 17

Conread position: 15-200
Cow position: chr8:47284046-47283848 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 148
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 82, 44

Conread position: 15-202
Cow position: chr8:3446073-3445882 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 65, 158

Conread position: 15-206
Cow position: chr8:48512989-48512801 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 137
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 85, 0

Conread position: 15-206
Cow position: chr8:55089825-55089631 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 82, 95

Conread position: 15-207
Cow position: chr8:27138771-27138573 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 151
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 84, 173

Conread position: 15-211
Cow position: chr8:38478962-38479166 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 149
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 83, 156

Conread position: 15-211
Cow position: chr8:44449580-44449370 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 150
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 15-212
Cow position: chr8:1187945-1188143 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 148
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 82, 52

Conread position: 15-218
Cow position: chr8:37347431-37347214 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 81, 195

Conread position: 15-221
Cow position: chr8:15394836-15394622 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 159
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 87, 28

Conread position: 15-222
Cow position: chr8:36375492-36375283 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 152
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 82, 203

Conread position: 15-229
Cow position: chr8:56249786-56250004 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 153
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 81, 156

Conread position: 15-231
Cow position: chr8:45879061-45879276 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 97, 22

Conread position: 15-237
Cow position: chr8:11612571-11612798 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 180
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 20, 156

Conread position: 15-238
Cow position: chr8:45925643-45925865 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 101, 22

Conread position: 15-242
Cow position: chr8:18869906-18870135 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 175
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 83, 15

Conread position: 15-247
Cow position: chr8:20105850-20105614 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 178
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 86, 165

Conread position: 15-323
Cow position: chr8:8773054-8772731 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 213
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 90, 51

Conread position: 16-105
Cow position: chr8:4552723-4552634 (view UCSC Genome Browser custom track)
Alignm length: 90
Alignm identity: 77
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 16-164
Cow position: chr8:1999654-1999812 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 129
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 82, 0

Conread position: 16-164
Cow position: chr8:8097242-8097084 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 123
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 80, 0

Conread position: 16-164
Cow position: chr8:16144155-16144313 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 128
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 83, 0

Conread position: 16-164
Cow position: chr8:37173037-37172878 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 129
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 83, 127

Conread position: 16-164
Cow position: chr8:46479858-46479703 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 83, 133

Conread position: 16-164
Cow position: chr8:55454692-55454842 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 116
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 104, 14

Conread position: 16-175
Cow position: chr8:19856681-19856520 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 82, 28

Conread position: 16-175
Cow position: chr8:53606497-53606324 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 5, 0

Conread position: 16-180
Cow position: chr8:51524032-51524206 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 133
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 84, 42

Conread position: 16-181
Cow position: chr8:24513122-24512944 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 82, 0

Conread position: 16-187
Cow position: chr8:50281902-50282085 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 82, 13

Conread position: 16-188
Cow position: chr8:11003775-11003596 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 79, 166

Conread position: 16-192
Cow position: chr8:44568826-44569002 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 72, 93

Conread position: 16-193
Cow position: chr8:36372541-36372350 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 141
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 16-200
Cow position: chr8:60668486-60668307 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 78, 94

Conread position: 16-211
Cow position: chr8:8767113-8766903 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 155
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 83, 180

Conread position: 16-212
Cow position: chr8:20783239-20783031 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 156
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 82, 177

Conread position: 16-220
Cow position: chr8:43112821-43112612 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 146
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 106, 0

Conread position: 17-157
Cow position: chr8:56886336-56886470 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 106
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 106, 0

Conread position: 17-160
Cow position: chr8:3056866-3057019 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 17-160
Cow position: chr8:27661887-27662034 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 17-164
Cow position: chr8:676290-676132 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 119
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 17-164
Cow position: chr8:5477825-5477674 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 17-164
Cow position: chr8:8112763-8112920 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 122
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 16, 0

Conread position: 17-164
Cow position: chr8:36249392-36249238 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 17-164
Cow position: chr8:52657188-52657339 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 80, 0

Conread position: 17-175
Cow position: chr8:43051997-43052168 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 139
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 18, 28

Conread position: 17-175
Cow position: chr8:46952541-46952711 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 134
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 82, 0

Conread position: 17-180
Cow position: chr8:1620700-1620525 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 17-180
Cow position: chr8:1651619-1651792 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 138
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 83, 18

Conread position: 17-180
Cow position: chr8:22273889-22274062 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 137
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 83, 33

Conread position: 17-180
Cow position: chr8:24419251-24419087 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 148, 83

Conread position: 17-180
Cow position: chr8:24870782-24870607 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 17-180
Cow position: chr8:38811328-38811500 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 81, 152

Conread position: 17-186
Cow position: chr8:37709176-37709339 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 79, 91

Conread position: 17-187
Cow position: chr8:53552701-53552879 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 134
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 88, 0

Conread position: 17-193
Cow position: chr8:35817093-35816905 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 143
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 81, 0

Conread position: 17-200
Cow position: chr8:19011769-19011587 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 134
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 79, 98

Conread position: 17-213
Cow position: chr8:20327824-20327620 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 147
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 54, 0

Conread position: 17-213
Cow position: chr8:35827778-35827570 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 156
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 81, 0

Conread position: 17-217
Cow position: chr8:61234376-61234182 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 95, 12

Conread position: 17-218
Cow position: chr8:52197431-52197220 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 83, 61

Conread position: 17-240
Cow position: chr8:20897371-20897603 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 173
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 81, 177

Conread position: 18-157
Cow position: chr8:5893971-5894109 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 111
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 78, 63

Conread position: 18-164
Cow position: chr8:3423031-3423186 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 130
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 80, 0

Conread position: 18-164
Cow position: chr8:26008908-26009064 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 80, 0

Conread position: 18-164
Cow position: chr8:34035704-34035853 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 119
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 98, 52

Conread position: 18-164
Cow position: chr8:58598667-58598817 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 120
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 57, 20

Conread position: 18-174
Cow position: chr8:8924319-8924150 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 133
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 36, 157

Conread position: 18-175
Cow position: chr8:26305839-26305673 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 82, 44

Conread position: 18-180
Cow position: chr8:26247564-26247396 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 121

Conread position: 18-180
Cow position: chr8:36034941-36034766 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 18-180
Cow position: chr8:37571677-37571504 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 135
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 80, 0

Conread position: 18-180
Cow position: chr8:44700008-44700179 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 134
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 87, 45

Conread position: 18-203
Cow position: chr8:690253-690058 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 147
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 80, 0

Conread position: 18-227
Cow position: chr8:24363610-24363392 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 161
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 80, 7

Conread position: 18-228
Cow position: chr8:38993760-38993970 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 153
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 98, 48

Conread position: 18-235
Cow position: chr8:15391128-15390916 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 152
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 148, 14

Conread position: 19-164
Cow position: chr8:6910134-6909980 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 121
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 79, 131

Conread position: 19-164
Cow position: chr8:27774245-27774100 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 113
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 101, 88

Conread position: 19-164
Cow position: chr8:28321998-28322153 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 120
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 19-164
Cow position: chr8:38860589-38860750 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 126
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 81, 0

Conread position: 19-164
Cow position: chr8:40743192-40743035 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 128
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 86, 0

Conread position: 19-175
Cow position: chr8:28509425-28509262 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 79, 0

Conread position: 19-175
Cow position: chr8:38711621-38711781 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 126
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 93, 0

Conread position: 19-175
Cow position: chr8:39475560-39475734 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 136
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 79, 29

Conread position: 19-227
Cow position: chr8:10832405-10832187 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 166
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 79, 10

Conread position: 19-231
Cow position: chr8:21775949-21776153 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 92, 0

Conread position: 20-164
Cow position: chr8:12058754-12058905 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 119
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 80, 31

Conread position: 20-175
Cow position: chr8:9814922-9815087 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 131
Alignm E-value: 4e-29
Alignm gaps (pig, cow): 80, 150

Conread position: 20-175
Cow position: chr8:54031908-54032068 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 121
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 96, 124

Conread position: 20-232
Cow position: chr8:61845522-61845299 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 11, 123

Conread position: 21-156
Cow position: chr8:1297540-1297685 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 112
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 77, 0

Conread position: 21-180
Cow position: chr8:54306385-54306552 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 125
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 84, 20

Conread position: 22-160
Cow position: chr8:36647398-36647257 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 112
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 76, 34

Conread position: 22-164
Cow position: chr8:573124-572982 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 110
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 23-169
Cow position: chr8:34556196-34556352 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 124
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 46, 0

Conread position: 23-180
Cow position: chr8:27033803-27033967 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 75, 141

Conread position: 23-180
Cow position: chr8:39116172-39116331 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 46, 73

Conread position: 24-219
Cow position: chr8:39968248-39968047 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 153
Alignm E-value: 3e-26
Alignm gaps (pig, cow): 74, 14

Conread position: 25-205
Cow position: chr8:31768000-31767813 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 91, 21

Conread position: 26-164
Cow position: chr8:1023994-1024140 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 115
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 73, 0

Conread position: 26-186
Cow position: chr8:61128662-61128496 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 83, 0

Conread position: 28-200
Cow position: chr8:19860632-19860460 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 68, 80

Conread position: 31-175
Cow position: chr8:37298517-37298672 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 126
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 71, 0

Conread position: 35-180
Cow position: chr8:54239609-54239763 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 68, 107

Conread position: 44-164
Cow position: chr8:37092935-37093056 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 100
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 54, 92

Conread position: 45-164
Cow position: chr8:33663957-33664078 (view UCSC Genome Browser custom track)
Alignm length: 122
Alignm identity: 95
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 71, 0

Show alignments to all cow chromosomes.