Cow genome map

Conread name: Ss1.1-mH3-MI-P-H3-aat-g-02-1-UM.s1.3

Conread position: 609-948
Cow position: chr12:9914984-9914638 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 241
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 79, 158

Conread position: 621-943
Cow position: chr12:34465831-34466152 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 232
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 6, 19

Conread position: 623-948
Cow position: chr12:37728316-37727989 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 216
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 96, 21

Conread position: 623-948
Cow position: chr12:37732609-37732935 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 218
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 196, 21

Conread position: 626-948
Cow position: chr12:4720128-4719795 (view UCSC Genome Browser custom track)
Alignm length: 340
Alignm identity: 244
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 101, 12

Conread position: 627-946
Cow position: chr12:19714878-19715190 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 223
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 221, 21

Conread position: 628-914
Cow position: chr12:18103433-18103724 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 216
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 92, 142

Conread position: 628-941
Cow position: chr12:38774060-38774383 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 232
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 28, 234

Conread position: 628-948
Cow position: chr12:7960404-7960727 (view UCSC Genome Browser custom track)
Alignm length: 333
Alignm identity: 220
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 97, 9

Conread position: 628-948
Cow position: chr12:31198924-31198611 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 215
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 177, 22

Conread position: 629-945
Cow position: chr12:15938085-15938414 (view UCSC Genome Browser custom track)
Alignm length: 336
Alignm identity: 226
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 29, 59

Conread position: 629-948
Cow position: chr12:35368828-35368490 (view UCSC Genome Browser custom track)
Alignm length: 344
Alignm identity: 244
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 26, 149

Conread position: 629-948
Cow position: chr12:47804318-47804003 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 223
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 175, 98

Conread position: 632-948
Cow position: chr12:27563196-27563528 (view UCSC Genome Browser custom track)
Alignm length: 342
Alignm identity: 240
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 10, 59

Conread position: 633-948
Cow position: chr12:5714795-5714477 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 225
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 93, 17

Conread position: 634-925
Cow position: chr12:1333397-1333106 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 200
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 14, 129

Conread position: 634-931
Cow position: chr12:30413780-30414078 (view UCSC Genome Browser custom track)
Alignm length: 304
Alignm identity: 203
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 84, 96

Conread position: 635-859
Cow position: chr12:42282659-42282901 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 176
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 13, 140

Conread position: 639-869
Cow position: chr12:40881747-40881983 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 17, 111

Conread position: 639-888
Cow position: chr12:30170825-30170581 (view UCSC Genome Browser custom track)
Alignm length: 252
Alignm identity: 185
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 59, 104

Conread position: 639-903
Cow position: chr12:35240927-35241204 (view UCSC Genome Browser custom track)
Alignm length: 287
Alignm identity: 206
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 21, 141

Conread position: 639-945
Cow position: chr12:4162201-4162514 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 209
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 117, 16

Conread position: 639-945
Cow position: chr12:19697566-19697260 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 231
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 88, 16

Conread position: 639-945
Cow position: chr12:23446890-23446574 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 228
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 11, 60

Conread position: 639-948
Cow position: chr12:27802885-27803197 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 217
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 91, 129

Conread position: 639-948
Cow position: chr12:40910110-40910440 (view UCSC Genome Browser custom track)
Alignm length: 335
Alignm identity: 236
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 19, 138

Conread position: 639-948
Cow position: chr12:42967168-42966847 (view UCSC Genome Browser custom track)
Alignm length: 331
Alignm identity: 233
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 76, 136

Conread position: 640-948
Cow position: chr12:33458293-33457994 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 209
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 274, 74

Conread position: 641-861
Cow position: chr12:9229346-9229564 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 152
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 163, 14

Conread position: 641-875
Cow position: chr12:24023639-24023880 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 170
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 15, 119

Conread position: 641-944
Cow position: chr12:31948284-31947971 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 229
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 15, 74

Conread position: 641-944
Cow position: chr12:36500775-36501091 (view UCSC Genome Browser custom track)
Alignm length: 325
Alignm identity: 226
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 14, 135

Conread position: 641-945
Cow position: chr12:30806025-30805706 (view UCSC Genome Browser custom track)
Alignm length: 326
Alignm identity: 217
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 12, 124

Conread position: 642-867
Cow position: chr12:11789606-11789822 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 167
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 10, 34

Conread position: 642-936
Cow position: chr12:30590939-30590628 (view UCSC Genome Browser custom track)
Alignm length: 320
Alignm identity: 222
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 51, 68

Conread position: 642-948
Cow position: chr12:30210639-30210331 (view UCSC Genome Browser custom track)
Alignm length: 313
Alignm identity: 214
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 81, 13

Conread position: 643-842
Cow position: chr12:43855057-43854849 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 154
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 80, 11

Conread position: 643-903
Cow position: chr12:21780332-21780063 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 200
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 82, 17

Conread position: 643-946
Cow position: chr12:36790644-36790960 (view UCSC Genome Browser custom track)
Alignm length: 327
Alignm identity: 223
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 83, 131

Conread position: 644-861
Cow position: chr12:44693367-44693151 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 154
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 74, 116

Conread position: 644-880
Cow position: chr12:24273203-24273442 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 167
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 12, 117

Conread position: 644-897
Cow position: chr12:21922607-21922353 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 188
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 77, 119

Conread position: 644-940
Cow position: chr12:11587937-11587630 (view UCSC Genome Browser custom track)
Alignm length: 315
Alignm identity: 233
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 85, 41

Conread position: 644-944
Cow position: chr12:34333284-34332966 (view UCSC Genome Browser custom track)
Alignm length: 328
Alignm identity: 228
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 56, 137

Conread position: 644-948
Cow position: chr12:19508396-19508716 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 213
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 83, 0

Conread position: 644-948
Cow position: chr12:23917007-23916692 (view UCSC Genome Browser custom track)
Alignm length: 322
Alignm identity: 228
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 85, 128

Conread position: 645-915
Cow position: chr12:26749783-26750073 (view UCSC Genome Browser custom track)
Alignm length: 294
Alignm identity: 213
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 76, 47

Conread position: 645-946
Cow position: chr12:25280334-25280647 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 226
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 15, 46

Conread position: 645-948
Cow position: chr12:12637018-12637336 (view UCSC Genome Browser custom track)
Alignm length: 324
Alignm identity: 225
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 83, 128

Conread position: 645-948
Cow position: chr12:22515568-22515885 (view UCSC Genome Browser custom track)
Alignm length: 319
Alignm identity: 212
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 5, 248

Conread position: 646-948
Cow position: chr12:17882021-17881711 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 218
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 104, 67

Conread position: 646-948
Cow position: chr12:35770858-35771170 (view UCSC Genome Browser custom track)
Alignm length: 321
Alignm identity: 221
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 42, 126

Conread position: 648-941
Cow position: chr12:18577992-18577702 (view UCSC Genome Browser custom track)
Alignm length: 301
Alignm identity: 202
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 5, 90

Conread position: 651-911
Cow position: chr12:24559501-24559246 (view UCSC Genome Browser custom track)
Alignm length: 265
Alignm identity: 175
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 61, 79

Conread position: 654-826
Cow position: chr12:6666719-6666545 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 72, 106

Conread position: 654-867
Cow position: chr12:28884940-28885149 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 81, 97

Conread position: 654-947
Cow position: chr12:1031122-1030832 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 200
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 77, 106

Conread position: 655-894
Cow position: chr12:6688042-6687798 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 181
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 20, 113

Conread position: 655-903
Cow position: chr12:5680822-5680579 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 171
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 150, 68

Conread position: 655-924
Cow position: chr12:37008553-37008826 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 198
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 70, 118

Conread position: 655-945
Cow position: chr12:3623848-3623546 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 222
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 72, 118

Conread position: 655-948
Cow position: chr12:5635295-5635598 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 213
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 67, 121

Conread position: 655-948
Cow position: chr12:17624679-17624972 (view UCSC Genome Browser custom track)
Alignm length: 305
Alignm identity: 218
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 54, 115

Conread position: 655-948
Cow position: chr12:33851513-33851208 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 214
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 75, 119

Conread position: 664-892
Cow position: chr12:3616131-3615909 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 169
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 65, 90

Conread position: 664-948
Cow position: chr12:42180980-42181289 (view UCSC Genome Browser custom track)
Alignm length: 312
Alignm identity: 218
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 60, 112

Conread position: 665-933
Cow position: chr12:23939366-23939091 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 195
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 53, 190

Conread position: 665-948
Cow position: chr12:31517036-31517318 (view UCSC Genome Browser custom track)
Alignm length: 289
Alignm identity: 203
Alignm E-value: 3e-38
Alignm gaps (pig, cow): 64, 98

Conread position: 673-941
Cow position: chr12:4866953-4866678 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 197
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 44, 99

Conread position: 690-948
Cow position: chr12:23574871-23574618 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 180
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 25, 71

Conread position: 719-876
Cow position: chr12:4797377-4797221 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 86, 37

Conread position: 721-935
Cow position: chr12:3906549-3906339 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 78, 27

Conread position: 721-945
Cow position: chr12:25452371-25452595 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 175
Alignm E-value: 9e-38
Alignm gaps (pig, cow): 24, 39

Conread position: 722-945
Cow position: chr12:29995389-29995608 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 161
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 9, 34

Conread position: 722-948
Cow position: chr12:22540281-22540054 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 167
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 80, 37

Conread position: 725-911
Cow position: chr12:31269225-31269040 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 146
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 80, 34

Conread position: 725-922
Cow position: chr12:14223052-14222855 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 144
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 77, 34

Conread position: 725-940
Cow position: chr12:24211478-24211275 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 80, 34

Conread position: 725-945
Cow position: chr12:3197339-3197128 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 158
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 81, 34

Conread position: 725-947
Cow position: chr12:16056787-16057007 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 80, 34

Conread position: 725-948
Cow position: chr12:42254738-42254516 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 172
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 78, 34

Conread position: 725-948
Cow position: chr12:46714440-46714222 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 157
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 80, 32

Conread position: 727-948
Cow position: chr12:6410666-6410883 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 58, 17

Conread position: 728-941
Cow position: chr12:7110264-7110056 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 160
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 77, 9

Conread position: 728-947
Cow position: chr12:23798166-23797952 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 67, 9

Conread position: 728-948
Cow position: chr12:17774861-17774648 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 159
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 77, 12

Conread position: 728-948
Cow position: chr12:33323428-33323646 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 155
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 77, 31

Conread position: 729-891
Cow position: chr12:42749504-42749350 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 29, 0

Conread position: 729-940
Cow position: chr12:42234126-42233915 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 76, 13

Conread position: 730-940
Cow position: chr12:4821027-4820813 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 75, 29

Conread position: 730-944
Cow position: chr12:21393773-21393558 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 75, 24

Conread position: 730-945
Cow position: chr12:45680343-45680131 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 167
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 75, 30

Conread position: 730-948
Cow position: chr12:10942353-10942138 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 163
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 73, 29

Conread position: 731-948
Cow position: chr12:8868817-8869028 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 186, 28

Conread position: 732-864
Cow position: chr12:7920306-7920175 (view UCSC Genome Browser custom track)
Alignm length: 134
Alignm identity: 106
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 70, 27

Conread position: 732-865
Cow position: chr12:37993668-37993800 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 104
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 73, 27

Conread position: 732-866
Cow position: chr12:6188050-6188183 (view UCSC Genome Browser custom track)
Alignm length: 136
Alignm identity: 104
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 73, 27

Conread position: 732-886
Cow position: chr12:3879916-3880066 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 117
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 73, 27

Conread position: 732-888
Cow position: chr12:4135141-4134990 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 73, 27

Conread position: 732-897
Cow position: chr12:40200761-40200607 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 27, 0

Conread position: 732-902
Cow position: chr12:18963864-18964028 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 132
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 68, 28

Conread position: 732-940
Cow position: chr12:29483822-29484034 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 148
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 71, 27

Conread position: 732-941
Cow position: chr12:18765909-18766122 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 148
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 73, 27

Conread position: 732-944
Cow position: chr12:7299395-7299608 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 160
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 11, 28

Conread position: 732-944
Cow position: chr12:15050561-15050764 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 158
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 184, 25

Conread position: 732-944
Cow position: chr12:30438301-30438098 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 146
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 27, 0

Conread position: 732-944
Cow position: chr12:42174480-42174273 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 160
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 182, 27

Conread position: 732-945
Cow position: chr12:4596528-4596317 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 157
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 87, 27

Conread position: 732-945
Cow position: chr12:15173887-15173677 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 70, 27

Conread position: 732-945
Cow position: chr12:19258341-19258131 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 157
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 11, 28

Conread position: 732-948
Cow position: chr12:5801107-5800884 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 158
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 23, 99

Conread position: 732-948
Cow position: chr12:7978101-7977892 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 163
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 145, 27

Conread position: 732-948
Cow position: chr12:33976263-33976049 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 73, 27

Conread position: 732-948
Cow position: chr12:41159651-41159444 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 119, 27

Conread position: 733-864
Cow position: chr12:32753576-32753446 (view UCSC Genome Browser custom track)
Alignm length: 133
Alignm identity: 102
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 72, 26

Conread position: 733-866
Cow position: chr12:9514424-9514292 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 103
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 69, 25

Conread position: 733-897
Cow position: chr12:18523632-18523467 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 128
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 70, 26

Conread position: 733-911
Cow position: chr12:16341954-16341782 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 133
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 72, 24

Conread position: 733-924
Cow position: chr12:35652808-35652983 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 124, 26

Conread position: 733-939
Cow position: chr12:29675079-29675279 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 153
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 69, 26

Conread position: 733-941
Cow position: chr12:6241382-6241168 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 72, 26

Conread position: 733-948
Cow position: chr12:30661887-30662098 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 164
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 69, 26

Conread position: 734-943
Cow position: chr12:9482244-9482447 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 157
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 69, 18

Conread position: 734-945
Cow position: chr12:25188251-25188040 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 153
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 9, 26

Conread position: 734-948
Cow position: chr12:22882118-22881902 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 71, 25

Conread position: 735-944
Cow position: chr12:38184655-38184450 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 153
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 71, 25

Conread position: 735-945
Cow position: chr12:1773600-1773813 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 158
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 47, 24

Conread position: 735-948
Cow position: chr12:46333406-46333202 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 183, 21

Conread position: 744-865
Cow position: chr12:45167967-45168087 (view UCSC Genome Browser custom track)
Alignm length: 123
Alignm identity: 97
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 61, 15

Conread position: 744-867
Cow position: chr12:7457493-7457613 (view UCSC Genome Browser custom track)
Alignm length: 125
Alignm identity: 101
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 58, 15

Conread position: 744-915
Cow position: chr12:4341692-4341854 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 127
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 58, 10

Conread position: 744-940
Cow position: chr12:9894834-9894641 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 151
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 59, 15

Conread position: 745-948
Cow position: chr12:6210107-6210308 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 151
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 60, 9

Conread position: 745-948
Cow position: chr12:30753770-30753572 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 172, 14

Conread position: 760-945
Cow position: chr12:7000566-7000752 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 148
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 45, 17

Conread position: 760-945
Cow position: chr12:44517700-44517883 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 135
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 103

Conread position: 760-947
Cow position: chr12:19664494-19664678 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 45, 89

Conread position: 760-948
Cow position: chr12:10491309-10491123 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 145
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 42, 33

Conread position: 760-948
Cow position: chr12:23855874-23855686 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 147
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 157, 42

Conread position: 760-948
Cow position: chr12:28582470-28582655 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 164, 45

Conread position: 773-948
Cow position: chr12:40028729-40028908 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 32, 98

Conread position: 791-942
Cow position: chr12:1343103-1343258 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 116
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 14, 71

Conread position: 811-948
Cow position: chr12:11583376-11583249 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 46, 0

Show alignments to all cow chromosomes.