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Cow genome map

           
Conread name:
           
Ss1.1-mH3-MI-P-H3-aat-g-02-1-UM.s1.3
        

               
Conread position:
               
597-948
               

               
Cow position:
               
chr15:39326665-39326313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
24, 58
               

               
Conread position:
               
603-948
               

               
Cow position:
               
chr15:39405580-39405931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
21, 178
               

               
Conread position:
               
620-883
               

               
Cow position:
               
chr15:49238112-49237859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
189, 63
               

               
Conread position:
               
622-863
               

               
Cow position:
               
chr15:6129094-6128850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
31, 135
               

               
Conread position:
               
625-948
               

               
Cow position:
               
chr15:37204937-37205246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
180, 28
               

               
Conread position:
               
627-932
               

               
Cow position:
               
chr15:5409028-5408723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
98, 145
               

               
Conread position:
               
627-948
               

               
Cow position:
               
chr15:11560645-11560313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
100, 24
               

               
Conread position:
               
628-861
               

               
Cow position:
               
chr15:30981818-30982054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
37, 10
               

               
Conread position:
               
628-945
               

               
Cow position:
               
chr15:21893650-21893980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
99, 25
               

               
Conread position:
               
628-948
               

               
Cow position:
               
chr15:2968201-2968536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
77, 150
               

               
Conread position:
               
629-941
               

               
Cow position:
               
chr15:20422897-20422585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
85, 46
               

               
Conread position:
               
629-948
               

               
Cow position:
               
chr15:20472675-20472350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
96, 15
               

               
Conread position:
               
630-945
               

               
Cow position:
               
chr15:4138000-4138331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
32, 150
               

               
Conread position:
               
632-889
               

               
Cow position:
               
chr15:36388170-36388431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
76, 46
               

               
Conread position:
               
632-912
               

               
Cow position:
               
chr15:36435071-36435366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
17, 149
               

               
Conread position:
               
632-946
               

               
Cow position:
               
chr15:19950358-19950673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
107, 19
               

               
Conread position:
               
633-948
               

               
Cow position:
               
chr15:19771007-19771333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
25, 143
               

               
Conread position:
               
635-948
               

               
Cow position:
               
chr15:44051607-44051300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
83, 116
               

               
Conread position:
               
637-837
               

               
Cow position:
               
chr15:16780816-16781020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
19, 52
               

               
Conread position:
               
637-881
               

               
Cow position:
               
chr15:2799872-2800112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
9, 87
               

               
Conread position:
               
637-940
               

               
Cow position:
               
chr15:47821709-47822003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
287, 95
               

               
Conread position:
               
637-944
               

               
Cow position:
               
chr15:6905415-6905732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
86, 132
               

               
Conread position:
               
637-944
               

               
Cow position:
               
chr15:52482951-52482633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
80, 7
               

               
Conread position:
               
637-945
               

               
Cow position:
               
chr15:26919392-26919077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
77, 18
               

               
Conread position:
               
637-945
               

               
Cow position:
               
chr15:53163898-53164217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
80, 7
               

               
Conread position:
               
638-944
               

               
Cow position:
               
chr15:37381506-37381819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
89, 138
               

               
Conread position:
               
638-948
               

               
Cow position:
               
chr15:28823935-28823621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
88, 47
               

               
Conread position:
               
639-825
               

               
Cow position:
               
chr15:36346672-36346862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
79, 126
               

               
Conread position:
               
639-859
               

               
Cow position:
               
chr15:30958314-30958103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
166, 43
               

               
Conread position:
               
639-944
               

               
Cow position:
               
chr15:1857604-1857925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
85, 62
               

               
Conread position:
               
639-944
               

               
Cow position:
               
chr15:29810003-29810315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
80, 73
               

               
Conread position:
               
639-944
               

               
Cow position:
               
chr15:42142750-42143053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
17, 117
               

               
Conread position:
               
639-945
               

               
Cow position:
               
chr15:22531551-22531855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
92, 130
               

               
Conread position:
               
639-946
               

               
Cow position:
               
chr15:13284913-13285211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
96, 46
               

               
Conread position:
               
639-948
               

               
Cow position:
               
chr15:5158251-5158576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
80, 11
               

               
Conread position:
               
639-948
               

               
Cow position:
               
chr15:5235111-5234802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
99, 26
               

               
Conread position:
               
639-948
               

               
Cow position:
               
chr15:7192367-7192060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
161, 95
               

               
Conread position:
               
639-948
               

               
Cow position:
               
chr15:20487313-20487012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
44, 124
               

               
Conread position:
               
639-948
               

               
Cow position:
               
chr15:24411315-24411612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
18, 80
               

               
Conread position:
               
639-948
               

               
Cow position:
               
chr15:24797924-24797610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
90, 21
               

               
Conread position:
               
639-948
               

               
Cow position:
               
chr15:34284531-34284210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
87, 30
               

               
Conread position:
               
640-864
               

               
Cow position:
               
chr15:49491529-49491762 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
14, 42
               

               
Conread position:
               
640-867
               

               
Cow position:
               
chr15:19554047-19553798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
68, 137
               

               
Conread position:
               
640-941
               

               
Cow position:
               
chr15:6647328-6647641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
10, 136
               

               
Conread position:
               
640-944
               

               
Cow position:
               
chr15:1804455-1804138 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
24, 131
               

               
Conread position:
               
640-948
               

               
Cow position:
               
chr15:24967680-24967990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
86, 128
               

               
Conread position:
               
641-925
               

               
Cow position:
               
chr15:43114835-43114548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
84, 17
               

               
Conread position:
               
641-945
               

               
Cow position:
               
chr15:44658246-44658555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
86, 196
               

               
Conread position:
               
641-946
               

               
Cow position:
               
chr15:225923-225608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
81, 238
               

               
Conread position:
               
641-948
               

               
Cow position:
               
chr15:27973328-27973016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
16, 128
               

               
Conread position:
               
642-939
               

               
Cow position:
               
chr15:22553660-22553350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
84, 133
               

               
Conread position:
               
644-817
               

               
Cow position:
               
chr15:14880449-14880272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
80, 120
               

               
Conread position:
               
644-855
               

               
Cow position:
               
chr15:26529779-26529999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
79, 16
               

               
Conread position:
               
644-855
               

               
Cow position:
               
chr15:42353282-42353495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
83, 10
               

               
Conread position:
               
644-867
               

               
Cow position:
               
chr15:6037564-6037332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
13, 124
               

               
Conread position:
               
644-915
               

               
Cow position:
               
chr15:32226976-32226703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
77, 33
               

               
Conread position:
               
644-922
               

               
Cow position:
               
chr15:20482945-20482674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
160, 16
               

               
Conread position:
               
644-941
               

               
Cow position:
               
chr15:26573281-26573572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
159, 77
               

               
Conread position:
               
644-941
               

               
Cow position:
               
chr15:44252265-44252554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
8, 63
               

               
Conread position:
               
644-946
               

               
Cow position:
               
chr15:22939443-22939125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
14, 245
               

               
Conread position:
               
644-948
               

               
Cow position:
               
chr15:15880830-15881130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
158, 61
               

               
Conread position:
               
644-948
               

               
Cow position:
               
chr15:23798639-23798328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
77, 123
               

               
Conread position:
               
644-948
               

               
Cow position:
               
chr15:27900622-27900308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
58, 126
               

               
Conread position:
               
645-864
               

               
Cow position:
               
chr15:38845808-38846019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
157, 86
               

               
Conread position:
               
645-876
               

               
Cow position:
               
chr15:31495334-31495091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
62, 121
               

               
Conread position:
               
645-922
               

               
Cow position:
               
chr15:795133-794843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
645-944
               

               
Cow position:
               
chr15:31042766-31043060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
73, 95
               

               
Conread position:
               
646-897
               

               
Cow position:
               
chr15:4076216-4076471 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
68, 120
               

               
Conread position:
               
646-948
               

               
Cow position:
               
chr15:5717604-5717911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 77
               

               
Conread position:
               
646-948
               

               
Cow position:
               
chr15:20370567-20370255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
79, 126
               

               
Conread position:
               
648-872
               

               
Cow position:
               
chr15:9978990-9979228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
76, 40
               

               
Conread position:
               
648-948
               

               
Cow position:
               
chr15:662577-662266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
74, 230
               

               
Conread position:
               
648-948
               

               
Cow position:
               
chr15:10231856-10231541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
73, 121
               

               
Conread position:
               
648-948
               

               
Cow position:
               
chr15:31929011-31928697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
51, 129
               

               
Conread position:
               
648-948
               

               
Cow position:
               
chr15:32324320-32324005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
73, 8
               

               
Conread position:
               
649-811
               

               
Cow position:
               
chr15:33992224-33992064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
78, 93
               

               
Conread position:
               
651-912
               

               
Cow position:
               
chr15:38827425-38827163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
76, 115
               

               
Conread position:
               
651-922
               

               
Cow position:
               
chr15:6749937-6749677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
651-946
               

               
Cow position:
               
chr15:50177017-50177312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
153, 66
               

               
Conread position:
               
651-947
               

               
Cow position:
               
chr15:4179049-4178736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
79, 119
               

               
Conread position:
               
651-948
               

               
Cow position:
               
chr15:11996138-11995825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
70, 227
               

               
Conread position:
               
651-948
               

               
Cow position:
               
chr15:17100814-17100509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
57, 119
               

               
Conread position:
               
654-948
               

               
Cow position:
               
chr15:16603722-16604023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
11, 15
               

               
Conread position:
               
655-863
               

               
Cow position:
               
chr15:14020391-14020601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
63, 104
               

               
Conread position:
               
655-864
               

               
Cow position:
               
chr15:25349868-25350087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
65, 114
               

               
Conread position:
               
655-941
               

               
Cow position:
               
chr15:2145221-2144936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
145, 60
               

               
Conread position:
               
655-948
               

               
Cow position:
               
chr15:9648795-9648506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
84, 61
               

               
Conread position:
               
655-948
               

               
Cow position:
               
chr15:50322505-50322797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
62, 39
               

               
Conread position:
               
657-945
               

               
Cow position:
               
chr15:85350-85052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
66, 119
               

               
Conread position:
               
658-946
               

               
Cow position:
               
chr15:10570699-10570418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
7, 60
               

               
Conread position:
               
661-947
               

               
Cow position:
               
chr15:26903093-26903397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
56, 110
               

               
Conread position:
               
662-946
               

               
Cow position:
               
chr15:21583026-21582722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
65, 223
               

               
Conread position:
               
664-826
               

               
Cow position:
               
chr15:16230132-16230302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
56, 104
               

               
Conread position:
               
664-866
               

               
Cow position:
               
chr15:44436660-44436871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
65, 25
               

               
Conread position:
               
664-945
               

               
Cow position:
               
chr15:11559449-11559157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
58, 21
               

               
Conread position:
               
664-948
               

               
Cow position:
               
chr15:6969890-6970184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
55, 18
               

               
Conread position:
               
664-948
               

               
Cow position:
               
chr15:21420850-21421140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
56, 21
               

               
Conread position:
               
665-922
               

               
Cow position:
               
chr15:9971056-9970804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
52, 65
               

               
Conread position:
               
668-878
               

               
Cow position:
               
chr15:1017823-1017616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
77, 59
               

               
Conread position:
               
678-902
               

               
Cow position:
               
chr15:8230632-8230412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
127, 40
               

               
Conread position:
               
688-864
               

               
Cow position:
               
chr15:41582816-41582998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
32, 78
               

               
Conread position:
               
688-902
               

               
Cow position:
               
chr15:32977911-32977693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
24, 74
               

               
Conread position:
               
688-945
               

               
Cow position:
               
chr15:9781421-9781662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
216, 27
               

               
Conread position:
               
690-868
               

               
Cow position:
               
chr15:24031147-24031322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
115, 13
               

               
Conread position:
               
696-948
               

               
Cow position:
               
chr15:5726278-5726525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
109, 32
               

               
Conread position:
               
723-941
               

               
Cow position:
               
chr15:20351811-20352025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
86, 10
               

               
Conread position:
               
723-946
               

               
Cow position:
               
chr15:12655937-12655715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
82, 27
               

               
Conread position:
               
725-890
               

               
Cow position:
               
chr15:44280082-44280242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
80, 34
               

               
Conread position:
               
725-915
               

               
Cow position:
               
chr15:36391654-36391839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
80, 34
               

               
Conread position:
               
725-943
               

               
Cow position:
               
chr15:23572706-23572488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
78, 34
               

               
Conread position:
               
725-944
               

               
Cow position:
               
chr15:21941865-21941652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
77, 33
               

               
Conread position:
               
725-946
               

               
Cow position:
               
chr15:12628-12850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
80, 34
               

               
Conread position:
               
725-946
               

               
Cow position:
               
chr15:9465657-9465877 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
80, 34
               

               
Conread position:
               
725-948
               

               
Cow position:
               
chr15:16667515-16667301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
77, 34
               

               
Conread position:
               
725-948
               

               
Cow position:
               
chr15:50088960-50089179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
80, 34
               

               
Conread position:
               
727-948
               

               
Cow position:
               
chr15:26912089-26911875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
185, 6
               

               
Conread position:
               
727-948
               

               
Cow position:
               
chr15:29330989-29331205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
77, 6
               

               
Conread position:
               
729-939
               

               
Cow position:
               
chr15:16928110-16927905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
74, 30
               

               
Conread position:
               
730-892
               

               
Cow position:
               
chr15:39286423-39286269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
75, 22
               

               
Conread position:
               
730-942
               

               
Cow position:
               
chr15:17664266-17664055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
15, 138
               

               
Conread position:
               
732-842
               

               
Cow position:
               
chr15:20488100-20487990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
113
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
63, 27
               

               
Conread position:
               
732-863
               

               
Cow position:
               
chr15:17196135-17196265 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
732-863
               

               
Cow position:
               
chr15:24629378-24629248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
133
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
70, 27
               

               
Conread position:
               
732-864
               

               
Cow position:
               
chr15:5535373-5535242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
732-867
               

               
Cow position:
               
chr15:42380915-42381049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
71, 27
               

               
Conread position:
               
732-902
               

               
Cow position:
               
chr15:9497513-9497348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
70, 23
               

               
Conread position:
               
732-902
               

               
Cow position:
               
chr15:14176512-14176348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
732-930
               

               
Cow position:
               
chr15:41527985-41527797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
732-938
               

               
Cow position:
               
chr15:48851498-48851300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
184, 20
               

               
Conread position:
               
732-940
               

               
Cow position:
               
chr15:39316855-39316644 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
75, 27
               

               
Conread position:
               
732-941
               

               
Cow position:
               
chr15:17233180-17233386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
76, 27
               

               
Conread position:
               
732-941
               

               
Cow position:
               
chr15:36793507-36793298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
70, 27
               

               
Conread position:
               
732-943
               

               
Cow position:
               
chr15:47843264-47843052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
70, 27
               

               
Conread position:
               
732-945
               

               
Cow position:
               
chr15:608133-608343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
73, 24
               

               
Conread position:
               
732-945
               

               
Cow position:
               
chr15:1297726-1297935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
732-945
               

               
Cow position:
               
chr15:4295750-4295963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
73, 26
               

               
Conread position:
               
732-945
               

               
Cow position:
               
chr15:8665613-8665393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
71, 27
               

               
Conread position:
               
732-945
               

               
Cow position:
               
chr15:38652613-38652401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
73, 24
               

               
Conread position:
               
732-945
               

               
Cow position:
               
chr15:41418842-41418633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
16, 28
               

               
Conread position:
               
732-948
               

               
Cow position:
               
chr15:2953147-2952928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
732-948
               

               
Cow position:
               
chr15:12870877-12870663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
75, 27
               

               
Conread position:
               
732-948
               

               
Cow position:
               
chr15:13554340-13554555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
732-948
               

               
Cow position:
               
chr15:16112387-16112601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
732-948
               

               
Cow position:
               
chr15:20459321-20459103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
732-948
               

               
Cow position:
               
chr15:21821937-21821725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
75, 27
               

               
Conread position:
               
732-948
               

               
Cow position:
               
chr15:22871601-22871807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
185, 27
               

               
Conread position:
               
732-948
               

               
Cow position:
               
chr15:22938775-22938569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
732-948
               

               
Cow position:
               
chr15:28258470-28258254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
73, 26
               

               
Conread position:
               
732-948
               

               
Cow position:
               
chr15:31857578-31857790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
732-948
               

               
Cow position:
               
chr15:38883136-38883353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
96, 27
               

               
Conread position:
               
732-948
               

               
Cow position:
               
chr15:39621325-39621543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
71, 27
               

               
Conread position:
               
732-948
               

               
Cow position:
               
chr15:41000083-40999867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
71, 24
               

               
Conread position:
               
732-948
               

               
Cow position:
               
chr15:43626456-43626669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
733-875
               

               
Cow position:
               
chr15:14261269-14261128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
72, 23
               

               
Conread position:
               
733-920
               

               
Cow position:
               
chr15:50660610-50660799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
72, 169
               

               
Conread position:
               
733-936
               

               
Cow position:
               
chr15:21803669-21803475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
733-938
               

               
Cow position:
               
chr15:35441090-35440884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
131, 26
               

               
Conread position:
               
733-941
               

               
Cow position:
               
chr15:39619130-39619347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
72, 26
               

               
Conread position:
               
733-944
               

               
Cow position:
               
chr15:2141315-2141104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
72, 26
               

               
Conread position:
               
733-944
               

               
Cow position:
               
chr15:38935398-38935605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
6e-24
               

               
Alignm gaps (pig, cow):
               
70, 26
               

               
Conread position:
               
733-945
               

               
Cow position:
               
chr15:35205165-35204950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
69, 26
               

               
Conread position:
               
733-946
               

               
Cow position:
               
chr15:10608317-10608106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
72, 16
               

               
Conread position:
               
733-946
               

               
Cow position:
               
chr15:21389176-21388969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
181, 26
               

               
Conread position:
               
733-948
               

               
Cow position:
               
chr15:363013-363225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
72, 26
               

               
Conread position:
               
733-948
               

               
Cow position:
               
chr15:31560400-31560201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
733-948
               

               
Cow position:
               
chr15:33976707-33976487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
69, 27
               

               
Conread position:
               
734-922
               

               
Cow position:
               
chr15:29541866-29542052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
71, 25
               

               
Conread position:
               
734-948
               

               
Cow position:
               
chr15:20534461-20534250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
71, 25
               

               
Conread position:
               
736-948
               

               
Cow position:
               
chr15:7308166-7307954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
69, 24
               

               
Conread position:
               
744-865
               

               
Cow position:
               
chr15:33242871-33242991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
123
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
59, 15
               

               
Conread position:
               
744-945
               

               
Cow position:
               
chr15:23768258-23768066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
61, 15
               

               
Conread position:
               
744-946
               

               
Cow position:
               
chr15:286477-286680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
61, 15
               

               
Conread position:
               
746-941
               

               
Cow position:
               
chr15:35945530-35945722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
59, 13
               

               
Conread position:
               
747-939
               

               
Cow position:
               
chr15:915843-915654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
58, 110
               

               
Conread position:
               
749-946
               

               
Cow position:
               
chr15:6272885-6272693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
55, 10
               

               
Conread position:
               
749-948
               

               
Cow position:
               
chr15:1330099-1329901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
56, 10
               

               
Conread position:
               
750-940
               

               
Cow position:
               
chr15:9107037-9107229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
55, 119
               

               
Conread position:
               
750-946
               

               
Cow position:
               
chr15:35417623-35417428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
7, 119
               

               
Conread position:
               
751-948
               

               
Cow position:
               
chr15:32241984-32242175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
54, 9
               

               
Conread position:
               
754-948
               

               
Cow position:
               
chr15:22136697-22136883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
760-912
               

               
Cow position:
               
chr15:4461034-4460885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 36
               

               
Conread position:
               
760-920
               

               
Cow position:
               
chr15:5727668-5727824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
760-948
               

               
Cow position:
               
chr15:10660542-10660351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
45, 109
               

               
Conread position:
               
760-948
               

               
Cow position:
               
chr15:18671443-18671251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
45, 113
               

               
Conread position:
               
760-948
               

               
Cow position:
               
chr15:47280126-47279939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
46, 98
               

               
Conread position:
               
763-948
               

               
Cow position:
               
chr15:37865382-37865567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
42, 107
               

               
Conread position:
               
804-945
               

               
Cow position:
               
chr15:14856409-14856272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
111, 62
               
Show alignments to all cow chromosomes.