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Cow genome map

           
Conread name:
           
Ss1.1-mH3-MI-P-H3-aat-g-02-1-UM.s1.3
        

               
Conread position:
               
618-897
               

               
Cow position:
               
chr3:41550187-41550459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
186, 37
               

               
Conread position:
               
621-948
               

               
Cow position:
               
chr3:29887237-29887558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
43, 18
               

               
Conread position:
               
625-922
               

               
Cow position:
               
chr3:18059900-18059595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 25
               

               
Conread position:
               
625-923
               

               
Cow position:
               
chr3:58134484-58134794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
106, 19
               

               
Conread position:
               
627-948
               

               
Cow position:
               
chr3:39661254-39661586 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
28, 245
               

               
Conread position:
               
627-948
               

               
Cow position:
               
chr3:45211502-45211164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
95, 17
               

               
Conread position:
               
627-948
               

               
Cow position:
               
chr3:71238347-71238020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
102, 17
               

               
Conread position:
               
628-855
               

               
Cow position:
               
chr3:31555134-31554906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
24, 101
               

               
Conread position:
               
628-901
               

               
Cow position:
               
chr3:36160002-36160280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
18, 11
               

               
Conread position:
               
628-902
               

               
Cow position:
               
chr3:39873511-39873784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
104, 26
               

               
Conread position:
               
628-938
               

               
Cow position:
               
chr3:61224550-61224869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
23, 253
               

               
Conread position:
               
628-945
               

               
Cow position:
               
chr3:13301657-13301981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
93, 25
               

               
Conread position:
               
629-838
               

               
Cow position:
               
chr3:18831615-18831394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
89, 139
               

               
Conread position:
               
629-941
               

               
Cow position:
               
chr3:3985513-3985198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
90, 140
               

               
Conread position:
               
629-948
               

               
Cow position:
               
chr3:36375346-36375678 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
94, 21
               

               
Conread position:
               
629-948
               

               
Cow position:
               
chr3:46541655-46541964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
176, 24
               

               
Conread position:
               
629-948
               

               
Cow position:
               
chr3:59035240-59034901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
102, 262
               

               
Conread position:
               
630-810
               

               
Cow position:
               
chr3:73513868-73514047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
91, 14
               

               
Conread position:
               
631-948
               

               
Cow position:
               
chr3:55819942-55819614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
104, 17
               

               
Conread position:
               
632-864
               

               
Cow position:
               
chr3:73741696-73741922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
632-940
               

               
Cow position:
               
chr3:30462982-30463295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
95, 64
               

               
Conread position:
               
632-944
               

               
Cow position:
               
chr3:23471272-23471595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
104, 21
               

               
Conread position:
               
632-948
               

               
Cow position:
               
chr3:15153881-15153556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
97, 7
               

               
Conread position:
               
632-948
               

               
Cow position:
               
chr3:19793093-19792757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
24, 52
               

               
Conread position:
               
632-948
               

               
Cow position:
               
chr3:20802445-20802759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 135
               

               
Conread position:
               
632-948
               

               
Cow position:
               
chr3:48241801-48241480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
21, 34
               

               
Conread position:
               
632-948
               

               
Cow position:
               
chr3:55318703-55319038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
23, 143
               

               
Conread position:
               
632-948
               

               
Cow position:
               
chr3:68587214-68586884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
23, 135
               

               
Conread position:
               
633-945
               

               
Cow position:
               
chr3:57577888-57577566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
94, 21
               

               
Conread position:
               
634-948
               

               
Cow position:
               
chr3:22221518-22221184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
7, 22
               

               
Conread position:
               
635-948
               

               
Cow position:
               
chr3:75050432-75050755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
94, 39
               

               
Conread position:
               
636-890
               

               
Cow position:
               
chr3:21866845-21867113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
13, 142
               

               
Conread position:
               
636-940
               

               
Cow position:
               
chr3:14193998-14194307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
22, 126
               

               
Conread position:
               
636-948
               

               
Cow position:
               
chr3:15051759-15052088 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
9, 140
               

               
Conread position:
               
639-823
               

               
Cow position:
               
chr3:32127232-32127417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
79, 122
               

               
Conread position:
               
639-854
               

               
Cow position:
               
chr3:909461-909676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
26, 121
               

               
Conread position:
               
639-865
               

               
Cow position:
               
chr3:56948908-56949142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
12, 42
               

               
Conread position:
               
639-865
               

               
Cow position:
               
chr3:75173413-75173634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
111, 41
               

               
Conread position:
               
639-868
               

               
Cow position:
               
chr3:68880945-68881173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
96, 15
               

               
Conread position:
               
639-877
               

               
Cow position:
               
chr3:68707836-68708074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
96, 15
               

               
Conread position:
               
639-902
               

               
Cow position:
               
chr3:45667153-45667431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
13, 140
               

               
Conread position:
               
639-907
               

               
Cow position:
               
chr3:27976336-27976619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
88, 15
               

               
Conread position:
               
639-939
               

               
Cow position:
               
chr3:31225609-31225312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
99, 41
               

               
Conread position:
               
639-944
               

               
Cow position:
               
chr3:26982237-26981934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
17, 49
               

               
Conread position:
               
639-948
               

               
Cow position:
               
chr3:73764028-73764331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
88, 117
               

               
Conread position:
               
640-923
               

               
Cow position:
               
chr3:42584705-42584433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
640-946
               

               
Cow position:
               
chr3:35153792-35153483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
86, 124
               

               
Conread position:
               
640-948
               

               
Cow position:
               
chr3:15228654-15228955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
16, 73
               

               
Conread position:
               
640-948
               

               
Cow position:
               
chr3:31309167-31309490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
16, 41
               

               
Conread position:
               
640-948
               

               
Cow position:
               
chr3:64172608-64172308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
164, 77
               

               
Conread position:
               
641-837
               

               
Cow position:
               
chr3:76056103-76056311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
88, 131
               

               
Conread position:
               
641-862
               

               
Cow position:
               
chr3:74584375-74584157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
159, 89
               

               
Conread position:
               
641-865
               

               
Cow position:
               
chr3:71423384-71423605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
71, 39
               

               
Conread position:
               
641-897
               

               
Cow position:
               
chr3:23203044-23203317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
641-939
               

               
Cow position:
               
chr3:61893998-61894296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
111, 44
               

               
Conread position:
               
641-941
               

               
Cow position:
               
chr3:53910291-53909987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
83, 39
               

               
Conread position:
               
641-945
               

               
Cow position:
               
chr3:83491265-83490953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
76, 129
               

               
Conread position:
               
641-948
               

               
Cow position:
               
chr3:14553059-14552742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
11, 133
               

               
Conread position:
               
641-948
               

               
Cow position:
               
chr3:42480781-42480485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
24, 61
               

               
Conread position:
               
642-868
               

               
Cow position:
               
chr3:25477975-25477749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
89, 13
               

               
Conread position:
               
642-940
               

               
Cow position:
               
chr3:54739715-54740017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
23, 47
               

               
Conread position:
               
642-944
               

               
Cow position:
               
chr3:70333785-70334096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
85, 215
               

               
Conread position:
               
642-948
               

               
Cow position:
               
chr3:51578137-51578457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
9, 233
               

               
Conread position:
               
642-948
               

               
Cow position:
               
chr3:67519993-67520308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 12
               

               
Conread position:
               
643-897
               

               
Cow position:
               
chr3:8834255-8834509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
56, 81
               

               
Conread position:
               
644-835
               

               
Cow position:
               
chr3:27246785-27246983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
75, 117
               

               
Conread position:
               
644-861
               

               
Cow position:
               
chr3:51349980-51349773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
158, 68
               

               
Conread position:
               
644-865
               

               
Cow position:
               
chr3:34095790-34096015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
73, 120
               

               
Conread position:
               
644-866
               

               
Cow position:
               
chr3:40100547-40100773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
81, 119
               

               
Conread position:
               
644-890
               

               
Cow position:
               
chr3:3036759-3037003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
74, 83
               

               
Conread position:
               
644-890
               

               
Cow position:
               
chr3:79093881-79094122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
87, 10
               

               
Conread position:
               
644-903
               

               
Cow position:
               
chr3:48459144-48459419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
16, 246
               

               
Conread position:
               
644-910
               

               
Cow position:
               
chr3:77081852-77082121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
81, 123
               

               
Conread position:
               
644-912
               

               
Cow position:
               
chr3:59366716-59366458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
159, 89
               

               
Conread position:
               
644-925
               

               
Cow position:
               
chr3:20993979-20993702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
10, 86
               

               
Conread position:
               
644-925
               

               
Cow position:
               
chr3:54435145-54434865 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
107, 11
               

               
Conread position:
               
644-941
               

               
Cow position:
               
chr3:3649057-3649347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
86, 117
               

               
Conread position:
               
644-944
               

               
Cow position:
               
chr3:43233686-43233376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
8, 130
               

               
Conread position:
               
644-946
               

               
Cow position:
               
chr3:15953900-15954221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
82, 246
               

               
Conread position:
               
644-948
               

               
Cow position:
               
chr3:48253061-48252748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
83, 125
               

               
Conread position:
               
644-948
               

               
Cow position:
               
chr3:55712613-55712295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
69, 122
               

               
Conread position:
               
644-948
               

               
Cow position:
               
chr3:60933599-60933283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
71, 21
               

               
Conread position:
               
645-864
               

               
Cow position:
               
chr3:20841698-20841926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
27, 118
               

               
Conread position:
               
645-945
               

               
Cow position:
               
chr3:2392788-2393096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
81, 129
               

               
Conread position:
               
645-948
               

               
Cow position:
               
chr3:34871749-34871432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
82, 144
               

               
Conread position:
               
646-864
               

               
Cow position:
               
chr3:30357689-30357470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
77, 88
               

               
Conread position:
               
646-895
               

               
Cow position:
               
chr3:56483681-56483432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
72, 97
               

               
Conread position:
               
646-897
               

               
Cow position:
               
chr3:83846072-83845827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
218, 19
               

               
Conread position:
               
646-941
               

               
Cow position:
               
chr3:35055796-35056108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
22, 26
               

               
Conread position:
               
648-862
               

               
Cow position:
               
chr3:33252714-33252940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
81, 124
               

               
Conread position:
               
648-900
               

               
Cow position:
               
chr3:48477864-48478117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
17, 39
               

               
Conread position:
               
648-944
               

               
Cow position:
               
chr3:17134509-17134204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
78, 124
               

               
Conread position:
               
648-944
               

               
Cow position:
               
chr3:56476852-56476548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
78, 50
               

               
Conread position:
               
648-945
               

               
Cow position:
               
chr3:18393222-18393521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
14, 121
               

               
Conread position:
               
648-945
               

               
Cow position:
               
chr3:60597715-60597410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
102, 164
               

               
Conread position:
               
648-948
               

               
Cow position:
               
chr3:23920248-23920565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
60, 130
               

               
Conread position:
               
650-948
               

               
Cow position:
               
chr3:28908040-28908338 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8.00141e-43
               

               
Alignm gaps (pig, cow):
               
65, 112
               

               
Conread position:
               
651-829
               

               
Cow position:
               
chr3:6901071-6900897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
91, 68
               

               
Conread position:
               
651-853
               

               
Cow position:
               
chr3:54905781-54905576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
76, 112
               

               
Conread position:
               
651-867
               

               
Cow position:
               
chr3:3698819-3698603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
82, 104
               

               
Conread position:
               
651-912
               

               
Cow position:
               
chr3:11987503-11987232 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
71, 124
               

               
Conread position:
               
651-928
               

               
Cow position:
               
chr3:19711162-19711447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
55, 17
               

               
Conread position:
               
651-940
               

               
Cow position:
               
chr3:65058874-65058575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
24, 125
               

               
Conread position:
               
651-941
               

               
Cow position:
               
chr3:7662032-7661723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
57, 129
               

               
Conread position:
               
651-941
               

               
Cow position:
               
chr3:51233929-51234225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
79, 116
               

               
Conread position:
               
651-944
               

               
Cow position:
               
chr3:2648333-2648643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
70, 127
               

               
Conread position:
               
651-944
               

               
Cow position:
               
chr3:12978439-12978748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
14, 126
               

               
Conread position:
               
651-945
               

               
Cow position:
               
chr3:8393514-8393218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
74, 19
               

               
Conread position:
               
651-945
               

               
Cow position:
               
chr3:18459362-18459654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
62, 29
               

               
Conread position:
               
651-945
               

               
Cow position:
               
chr3:38347336-38347071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
651-945
               

               
Cow position:
               
chr3:52651905-52652208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
70, 173
               

               
Conread position:
               
651-948
               

               
Cow position:
               
chr3:1517338-1517650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
67, 126
               

               
Conread position:
               
651-948
               

               
Cow position:
               
chr3:17936672-17936971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
75, 116
               

               
Conread position:
               
651-948
               

               
Cow position:
               
chr3:29359989-29360276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
66, 92
               

               
Conread position:
               
651-948
               

               
Cow position:
               
chr3:32610419-32610114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
71, 60
               

               
Conread position:
               
651-948
               

               
Cow position:
               
chr3:58973451-58973167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
30, 68
               

               
Conread position:
               
654-948
               

               
Cow position:
               
chr3:37186980-37186694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
64, 81
               

               
Conread position:
               
654-948
               

               
Cow position:
               
chr3:61116700-61116994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
151, 6
               

               
Conread position:
               
655-828
               

               
Cow position:
               
chr3:54557837-54557657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
62, 112
               

               
Conread position:
               
655-891
               

               
Cow position:
               
chr3:14547170-14546925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
72, 124
               

               
Conread position:
               
655-925
               

               
Cow position:
               
chr3:2199035-2198774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
149, 62
               

               
Conread position:
               
655-944
               

               
Cow position:
               
chr3:5365836-5365545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
65, 108
               

               
Conread position:
               
655-945
               

               
Cow position:
               
chr3:3889406-3889700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
71, 97
               

               
Conread position:
               
655-945
               

               
Cow position:
               
chr3:26904270-26903983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
62, 105
               

               
Conread position:
               
655-945
               

               
Cow position:
               
chr3:59474291-59473987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
62, 220
               

               
Conread position:
               
655-948
               

               
Cow position:
               
chr3:5374480-5374198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
256, 24
               

               
Conread position:
               
655-948
               

               
Cow position:
               
chr3:58764915-58765215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
78, 105
               

               
Conread position:
               
656-946
               

               
Cow position:
               
chr3:60389922-60389633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
38, 103
               

               
Conread position:
               
657-948
               

               
Cow position:
               
chr3:74846556-74846847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
147, 98
               

               
Conread position:
               
660-945
               

               
Cow position:
               
chr3:76267808-76268112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
62, 117
               

               
Conread position:
               
664-923
               

               
Cow position:
               
chr3:55124123-55124391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
55, 19
               

               
Conread position:
               
664-947
               

               
Cow position:
               
chr3:59000601-59000883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
63, 105
               

               
Conread position:
               
664-948
               

               
Cow position:
               
chr3:7566259-7566555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
65, 107
               

               
Conread position:
               
664-948
               

               
Cow position:
               
chr3:19793428-19793727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
60, 112
               

               
Conread position:
               
665-945
               

               
Cow position:
               
chr3:70334531-70334828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
50, 110
               

               
Conread position:
               
665-948
               

               
Cow position:
               
chr3:13329632-13329914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
70, 97
               

               
Conread position:
               
668-875
               

               
Cow position:
               
chr3:39988094-39988299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
67, 91
               

               
Conread position:
               
669-941
               

               
Cow position:
               
chr3:84250392-84250671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
52, 98
               

               
Conread position:
               
671-947
               

               
Cow position:
               
chr3:34271054-34270780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
60, 91
               

               
Conread position:
               
672-866
               

               
Cow position:
               
chr3:23667756-23667565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
131, 56
               

               
Conread position:
               
677-884
               

               
Cow position:
               
chr3:11716130-11715925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
128, 82
               

               
Conread position:
               
677-948
               

               
Cow position:
               
chr3:18067262-18066999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
185, 17
               

               
Conread position:
               
678-948
               

               
Cow position:
               
chr3:83215397-83215123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
11, 39
               

               
Conread position:
               
679-941
               

               
Cow position:
               
chr3:44102114-44101842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
55, 95
               

               
Conread position:
               
680-915
               

               
Cow position:
               
chr3:8394066-8393837 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
47, 39
               

               
Conread position:
               
686-948
               

               
Cow position:
               
chr3:1830455-1830705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
688-948
               

               
Cow position:
               
chr3:45648251-45647996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
229, 54
               

               
Conread position:
               
690-862
               

               
Cow position:
               
chr3:53904580-53904406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
37, 73
               

               
Conread position:
               
690-948
               

               
Cow position:
               
chr3:2025318-2025050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
112, 69
               

               
Conread position:
               
697-863
               

               
Cow position:
               
chr3:64373041-64373209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
17, 64
               

               
Conread position:
               
698-945
               

               
Cow position:
               
chr3:3032518-3032272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
166, 30
               

               
Conread position:
               
707-945
               

               
Cow position:
               
chr3:53384179-53384416 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
95, 15
               

               
Conread position:
               
722-948
               

               
Cow position:
               
chr3:5097294-5097070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
83, 27
               

               
Conread position:
               
722-948
               

               
Cow position:
               
chr3:53739098-53739322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
83, 11
               

               
Conread position:
               
725-866
               

               
Cow position:
               
chr3:46792470-46792330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
80, 34
               

               
Conread position:
               
725-929
               

               
Cow position:
               
chr3:58767348-58767148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
80, 35
               

               
Conread position:
               
725-938
               

               
Cow position:
               
chr3:21014871-21015087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
64, 34
               

               
Conread position:
               
725-945
               

               
Cow position:
               
chr3:17895933-17895713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
73, 31
               

               
Conread position:
               
725-945
               

               
Cow position:
               
chr3:42423243-42423466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
82, 34
               

               
Conread position:
               
725-945
               

               
Cow position:
               
chr3:55085085-55085310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
6e-30
               

               
Alignm gaps (pig, cow):
               
80, 8
               

               
Conread position:
               
725-946
               

               
Cow position:
               
chr3:52017856-52017634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
78, 34
               

               
Conread position:
               
725-948
               

               
Cow position:
               
chr3:2675114-2674892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
77, 34
               

               
Conread position:
               
725-948
               

               
Cow position:
               
chr3:49650473-49650250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
80, 34
               

               
Conread position:
               
727-929
               

               
Cow position:
               
chr3:55984180-55983981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
78, 6
               

               
Conread position:
               
727-944
               

               
Cow position:
               
chr3:72391164-72390953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
78, 6
               

               
Conread position:
               
727-948
               

               
Cow position:
               
chr3:81087557-81087757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
728-905
               

               
Cow position:
               
chr3:66631270-66631440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
77, 31
               

               
Conread position:
               
728-924
               

               
Cow position:
               
chr3:3656596-3656405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
77, 31
               

               
Conread position:
               
728-944
               

               
Cow position:
               
chr3:65413196-65413412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
77, 31
               

               
Conread position:
               
728-948
               

               
Cow position:
               
chr3:53046582-53046793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
729-842
               

               
Cow position:
               
chr3:8814032-8814144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
115
               

               
Alignm identity:
               
93
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
71, 30
               

               
Conread position:
               
729-945
               

               
Cow position:
               
chr3:79292909-79292697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
193, 30
               

               
Conread position:
               
730-944
               

               
Cow position:
               
chr3:36671915-36672122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
181, 29
               

               
Conread position:
               
730-945
               

               
Cow position:
               
chr3:52863104-52863317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
75, 29
               

               
Conread position:
               
732-842
               

               
Cow position:
               
chr3:48483256-48483147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
112
               

               
Alignm identity:
               
91
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 27
               

               
Conread position:
               
732-855
               

               
Cow position:
               
chr3:15973644-15973522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
732-862
               

               
Cow position:
               
chr3:11292170-11292299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
73, 22
               

               
Conread position:
               
732-864
               

               
Cow position:
               
chr3:21997710-21997841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
732-896
               

               
Cow position:
               
chr3:37041497-37041334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
732-899
               

               
Cow position:
               
chr3:40145542-40145383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
732-906
               

               
Cow position:
               
chr3:51609108-51609277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
71, 27
               

               
Conread position:
               
732-915
               

               
Cow position:
               
chr3:37599350-37599526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
732-915
               

               
Cow position:
               
chr3:75238535-75238358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
70, 27
               

               
Conread position:
               
732-918
               

               
Cow position:
               
chr3:49996643-49996831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
71, 27
               

               
Conread position:
               
732-923
               

               
Cow position:
               
chr3:15443651-15443836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
70, 27
               

               
Conread position:
               
732-923
               

               
Cow position:
               
chr3:72503818-72504005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
70, 27
               

               
Conread position:
               
732-924
               

               
Cow position:
               
chr3:28898145-28898328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
732-933
               

               
Cow position:
               
chr3:83988610-83988414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
74, 27
               

               
Conread position:
               
732-939
               

               
Cow position:
               
chr3:51033444-51033243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
732-941
               

               
Cow position:
               
chr3:81277390-81277599 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
732-941
               

               
Cow position:
               
chr3:81471018-81471224 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
71, 27
               

               
Conread position:
               
732-942
               

               
Cow position:
               
chr3:70401974-70401771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
185, 27
               

               
Conread position:
               
732-944
               

               
Cow position:
               
chr3:56299-56509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
88, 22
               

               
Conread position:
               
732-944
               

               
Cow position:
               
chr3:22510103-22509894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
732-944
               

               
Cow position:
               
chr3:24468307-24468511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
732-944
               

               
Cow position:
               
chr3:49383027-49382820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
732-944
               

               
Cow position:
               
chr3:49790734-49790942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
732-944
               

               
Cow position:
               
chr3:53318478-53318272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
71, 22
               

               
Conread position:
               
732-944
               

               
Cow position:
               
chr3:53875687-53875891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
732-944
               

               
Cow position:
               
chr3:66883866-66884072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
182, 27
               

               
Conread position:
               
732-944
               

               
Cow position:
               
chr3:72342323-72342112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
732-944
               

               
Cow position:
               
chr3:77365212-77365430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
71, 27
               

               
Conread position:
               
732-945
               

               
Cow position:
               
chr3:12711837-12712051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
71, 27
               

               
Conread position:
               
732-945
               

               
Cow position:
               
chr3:30222269-30222054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
73, 28
               

               
Conread position:
               
732-945
               

               
Cow position:
               
chr3:57760576-57760366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
70, 27
               

               
Conread position:
               
732-945
               

               
Cow position:
               
chr3:59451682-59451462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
63, 27
               

               
Conread position:
               
732-945
               

               
Cow position:
               
chr3:72676169-72675959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
73, 28
               

               
Conread position:
               
732-945
               

               
Cow position:
               
chr3:74134782-74134572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
73, 30
               

               
Conread position:
               
732-945
               

               
Cow position:
               
chr3:80053465-80053672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
175, 27
               

               
Conread position:
               
732-948
               

               
Cow position:
               
chr3:17934860-17935070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
72, 24
               

               
Conread position:
               
732-948
               

               
Cow position:
               
chr3:48900255-48900474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
140, 24
               

               
Conread position:
               
732-948
               

               
Cow position:
               
chr3:53270908-53270693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
73, 30
               

               
Conread position:
               
732-948
               

               
Cow position:
               
chr3:54100648-54100857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
70, 27
               

               
Conread position:
               
732-948
               

               
Cow position:
               
chr3:57624542-57624329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
732-948
               

               
Cow position:
               
chr3:65969245-65969025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
732-948
               

               
Cow position:
               
chr3:67930109-67930319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
185, 27
               

               
Conread position:
               
732-948
               

               
Cow position:
               
chr3:73395194-73394985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
73, 27
               

               
Conread position:
               
732-948
               

               
Cow position:
               
chr3:73820291-73820506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
70, 28
               

               
Conread position:
               
732-948
               

               
Cow position:
               
chr3:74502247-74502456 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
73, 28
               

               
Conread position:
               
732-948
               

               
Cow position:
               
chr3:80581733-80581528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
185, 24
               

               
Conread position:
               
733-915
               

               
Cow position:
               
chr3:33329894-33329714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
73, 26
               

               
Conread position:
               
733-942
               

               
Cow position:
               
chr3:71231472-71231268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
72, 26
               

               
Conread position:
               
733-944
               

               
Cow position:
               
chr3:5366845-5366638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
72, 23
               

               
Conread position:
               
733-945
               

               
Cow position:
               
chr3:4319788-4319582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
72, 23
               

               
Conread position:
               
733-945
               

               
Cow position:
               
chr3:66900656-66900869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
72, 26
               

               
Conread position:
               
733-946
               

               
Cow position:
               
chr3:2506402-2506610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
73, 23
               

               
Conread position:
               
733-947
               

               
Cow position:
               
chr3:29596466-29596258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
69, 26
               

               
Conread position:
               
733-948
               

               
Cow position:
               
chr3:210396-210181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
69, 26
               

               
Conread position:
               
733-948
               

               
Cow position:
               
chr3:14601627-14601848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
72, 26
               

               
Conread position:
               
733-948
               

               
Cow position:
               
chr3:35852394-35852602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
72, 26
               

               
Conread position:
               
734-864
               

               
Cow position:
               
chr3:11281842-11281713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
132
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
71, 25
               

               
Conread position:
               
734-912
               

               
Cow position:
               
chr3:49679208-49679035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
71, 26
               

               
Conread position:
               
734-945
               

               
Cow position:
               
chr3:59621572-59621778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
71, 25
               

               
Conread position:
               
734-945
               

               
Cow position:
               
chr3:84175746-84175959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
9, 26
               

               
Conread position:
               
734-948
               

               
Cow position:
               
chr3:55970583-55970370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
71, 25
               

               
Conread position:
               
734-948
               

               
Cow position:
               
chr3:71497061-71497278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
11, 26
               

               
Conread position:
               
735-924
               

               
Cow position:
               
chr3:27545744-27545930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
70, 21
               

               
Conread position:
               
735-924
               

               
Cow position:
               
chr3:72473990-72473804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
70, 25
               

               
Conread position:
               
735-944
               

               
Cow position:
               
chr3:9663097-9663303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
68, 21
               

               
Conread position:
               
737-891
               

               
Cow position:
               
chr3:52147578-52147726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
66, 22
               

               
Conread position:
               
737-944
               

               
Cow position:
               
chr3:27696906-27697109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
68, 22
               

               
Conread position:
               
744-866
               

               
Cow position:
               
chr3:5040242-5040364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
125
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
113, 15
               

               
Conread position:
               
744-922
               

               
Cow position:
               
chr3:58317882-58318060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
61, 15
               

               
Conread position:
               
744-941
               

               
Cow position:
               
chr3:53703897-53704096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
61, 15
               

               
Conread position:
               
744-944
               

               
Cow position:
               
chr3:80468612-80468807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
61, 15
               

               
Conread position:
               
744-945
               

               
Cow position:
               
chr3:78896713-78896516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
58, 10
               

               
Conread position:
               
747-948
               

               
Cow position:
               
chr3:33698798-33698593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
11, 113
               

               
Conread position:
               
748-945
               

               
Cow position:
               
chr3:73709112-73708915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
7, 116
               

               
Conread position:
               
748-948
               

               
Cow position:
               
chr3:24935430-24935234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
7, 120
               

               
Conread position:
               
749-948
               

               
Cow position:
               
chr3:23444827-23445029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
58, 10
               

               
Conread position:
               
751-948
               

               
Cow position:
               
chr3:45279525-45279331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
756-945
               

               
Cow position:
               
chr3:76713269-76713457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
92, 46
               

               
Conread position:
               
759-948
               

               
Cow position:
               
chr3:32787513-32787327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
44, 108
               

               
Conread position:
               
760-894
               

               
Cow position:
               
chr3:45222099-45222234 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
10, 110
               

               
Conread position:
               
760-902
               

               
Cow position:
               
chr3:14632931-14633073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
44, 103
               

               
Conread position:
               
760-925
               

               
Cow position:
               
chr3:65019813-65019975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
46, 103
               

               
Conread position:
               
760-945
               

               
Cow position:
               
chr3:74878537-74878722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
42, 110
               

               
Conread position:
               
760-948
               

               
Cow position:
               
chr3:11712017-11711825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
45, 111
               

               
Conread position:
               
760-948
               

               
Cow position:
               
chr3:48810593-48810773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
45, 108
               

               
Conread position:
               
760-948
               

               
Cow position:
               
chr3:63269275-63269086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
45, 110
               

               
Conread position:
               
760-948
               

               
Cow position:
               
chr3:66609792-66609979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
154, 45
               

               
Conread position:
               
760-948
               

               
Cow position:
               
chr3:72019168-72018981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
97, 42
               

               
Conread position:
               
761-948
               

               
Cow position:
               
chr3:25945144-25944948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
8e-22
               

               
Alignm gaps (pig, cow):
               
41, 140
               

               
Conread position:
               
762-866
               

               
Cow position:
               
chr3:22871793-22871898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
106
               

               
Alignm identity:
               
89
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
763-902
               

               
Cow position:
               
chr3:74900591-74900725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
141
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
42, 108
               

               
Conread position:
               
763-944
               

               
Cow position:
               
chr3:75687388-75687570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
42, 95
               

               
Conread position:
               
768-948
               

               
Cow position:
               
chr3:43727123-43726941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
34, 94
               

               
Conread position:
               
773-946
               

               
Cow position:
               
chr3:32183979-32184155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
32, 100
               

               
Conread position:
               
776-945
               

               
Cow position:
               
chr3:59884033-59884205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
26, 85
               

               
Conread position:
               
777-948
               

               
Cow position:
               
chr3:2850863-2851030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
140, 26
               

               
Conread position:
               
791-945
               

               
Cow position:
               
chr3:74500264-74500105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
19, 103
               

               
Conread position:
               
791-948
               

               
Cow position:
               
chr3:39328421-39328259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
14, 81
               

               
Conread position:
               
804-945
               

               
Cow position:
               
chr3:59515111-59514971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
7e-21
               

               
Alignm gaps (pig, cow):
               
113, 53
               

               
Conread position:
               
817-948
               

               
Cow position:
               
chr3:1534622-1534756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
9e-23
               

               
Alignm gaps (pig, cow):
               
100, 56
               
Show alignments to all cow chromosomes.