Cow genome map


           Conread name:
           Ss1.1-mO1-MI-P-O1-abx-f-01-1-UM.s1.3.5
        

               Conread position:
               613-903
               

               Cow position:
               chr20:14961570-14961282 (view UCSC Genome Browser custom track)
               

               Alignm length:
               297
               

               Alignm identity:
               200
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               200, 33
               

               Conread position:
               613-1061
               

               Cow position:
               chr20:6204158-6203706 (view UCSC Genome Browser custom track)
               

               Alignm length:
               463
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               173, 44
               

               Conread position:
               616-970
               

               Cow position:
               chr20:35098360-35098009 (view UCSC Genome Browser custom track)
               

               Alignm length:
               361
               

               Alignm identity:
               241
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               178, 42
               

               Conread position:
               621-1295
               

               Cow position:
               chr20:829717-829039 (view UCSC Genome Browser custom track)
               

               Alignm length:
               695
               

               Alignm identity:
               435
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               165, 103
               

               Conread position:
               634-1056
               

               Cow position:
               chr20:5588173-5588601 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               287
               

               Alignm E-value:
               7.00649e-44
               

               Alignm gaps (pig, cow):
               146, 27
               

               Conread position:
               640-1061
               

               Cow position:
               chr20:18343511-18343072 (view UCSC Genome Browser custom track)
               

               Alignm length:
               448
               

               Alignm identity:
               304
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               128, 18
               

               Conread position:
               654-1057
               

               Cow position:
               chr20:13128544-13128129 (view UCSC Genome Browser custom track)
               

               Alignm length:
               419
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               101, 71
               

               Conread position:
               772-1037
               

               Cow position:
               chr20:40810416-40810140 (view UCSC Genome Browser custom track)
               

               Alignm length:
               281
               

               Alignm identity:
               190
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               46, 10
               
Show alignments to all cow chromosomes.