Cow genome map


           Conread name:
           Ss1.1-mO1-MI-P-O1-abx-f-01-1-UM.s1.3.5
        

               Conread position:
               610-1061
               

               Cow position:
               chr9:34424526-34424086 (view UCSC Genome Browser custom track)
               

               Alignm length:
               462
               

               Alignm identity:
               303
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               132, 114
               

               Conread position:
               610-1148
               

               Cow position:
               chr9:17854876-17855426 (view UCSC Genome Browser custom track)
               

               Alignm length:
               557
               

               Alignm identity:
               373
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               172, 47
               

               Conread position:
               613-993
               

               Cow position:
               chr9:63589865-63590251 (view UCSC Genome Browser custom track)
               

               Alignm length:
               394
               

               Alignm identity:
               253
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               44, 26
               

               Conread position:
               613-1084
               

               Cow position:
               chr9:38457031-38457505 (view UCSC Genome Browser custom track)
               

               Alignm length:
               488
               

               Alignm identity:
               333
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               178, 22
               

               Conread position:
               616-1085
               

               Cow position:
               chr9:33034962-33034486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               490
               

               Alignm identity:
               336
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 41
               

               Conread position:
               620-820
               

               Cow position:
               chr9:19441061-19441260 (view UCSC Genome Browser custom track)
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               116, 37
               

               Conread position:
               620-1041
               

               Cow position:
               chr9:21106039-21105614 (view UCSC Genome Browser custom track)
               

               Alignm length:
               434
               

               Alignm identity:
               283
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               114, 37
               

               Conread position:
               621-811
               

               Cow position:
               chr9:56251749-56251939 (view UCSC Genome Browser custom track)
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               36, 104
               

               Conread position:
               625-1005
               

               Cow position:
               chr9:7166029-7165654 (view UCSC Genome Browser custom track)
               

               Alignm length:
               388
               

               Alignm identity:
               263
               

               Alignm E-value:
               7e-40
               

               Alignm gaps (pig, cow):
               161, 40
               

               Conread position:
               627-1060
               

               Cow position:
               chr9:40037048-40037486 (view UCSC Genome Browser custom track)
               

               Alignm length:
               451
               

               Alignm identity:
               300
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               159, 97
               

               Conread position:
               639-887
               

               Cow position:
               chr9:2974710-2974474 (view UCSC Genome Browser custom track)
               

               Alignm length:
               253
               

               Alignm identity:
               176
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               103, 18
               

               Conread position:
               812-1057
               

               Cow position:
               chr9:13521258-13521513 (view UCSC Genome Browser custom track)
               

               Alignm length:
               257
               

               Alignm identity:
               180
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               13, 208
               
Show alignments to all cow chromosomes.