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Cow genome map

           
Conread name:
           
Ss1.1-pigcb_1823.5
        

               
Conread position:
               
157-560
               

               
Cow position:
               
chr14:33309189-33309573 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
180-553
               

               
Cow position:
               
chr14:23712989-23712619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
18, 112
               

               
Conread position:
               
180-652
               

               
Cow position:
               
chr14:14466178-14466617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
392, 32
               

               
Conread position:
               
181-512
               

               
Cow position:
               
chr14:3564574-3564262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
26, 50
               

               
Conread position:
               
181-570
               

               
Cow position:
               
chr14:24417185-24416801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
29, 63
               

               
Conread position:
               
182-460
               

               
Cow position:
               
chr14:24581223-24580958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
182-665
               

               
Cow position:
               
chr14:18345431-18345895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
104, 39
               

               
Conread position:
               
182-680
               

               
Cow position:
               
chr14:9020326-9019855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
21, 41
               

               
Conread position:
               
186-557
               

               
Cow position:
               
chr14:50055697-50055332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
142, 220
               

               
Conread position:
               
187-351
               

               
Cow position:
               
chr14:39616614-39616779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
23, 81
               

               
Conread position:
               
188-669
               

               
Cow position:
               
chr14:48689824-48689354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
29, 141
               

               
Conread position:
               
191-569
               

               
Cow position:
               
chr14:21690990-21691355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
63, 23
               

               
Conread position:
               
192-329
               

               
Cow position:
               
chr14:26654788-26654922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
192-350
               

               
Cow position:
               
chr14:13634416-13634574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
192-460
               

               
Cow position:
               
chr14:7270726-7270973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
192-460
               

               
Cow position:
               
chr14:14280707-14280441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
134, 49
               

               
Conread position:
               
192-468
               

               
Cow position:
               
chr14:32470918-32470648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
145, 97
               

               
Conread position:
               
192-652
               

               
Cow position:
               
chr14:36437194-36437646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 92
               

               
Conread position:
               
192-665
               

               
Cow position:
               
chr14:20010021-20010484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
192-666
               

               
Cow position:
               
chr14:38379310-38378832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 20
               

               
Conread position:
               
192-680
               

               
Cow position:
               
chr14:28987981-28987505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
342, 20
               

               
Conread position:
               
193-495
               

               
Cow position:
               
chr14:13006792-13006499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
138, 26
               

               
Conread position:
               
193-652
               

               
Cow position:
               
chr14:33247149-33247577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
194-401
               

               
Cow position:
               
chr14:42918378-42918176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
60, 73
               

               
Conread position:
               
194-457
               

               
Cow position:
               
chr14:21964408-21964154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
194-462
               

               
Cow position:
               
chr14:6419026-6419274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
194-469
               

               
Cow position:
               
chr14:8964831-8964569 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
194-499
               

               
Cow position:
               
chr14:33538637-33538945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
15, 88
               

               
Conread position:
               
194-521
               

               
Cow position:
               
chr14:41325148-41325478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
47, 126
               

               
Conread position:
               
194-629
               

               
Cow position:
               
chr14:13582472-13582889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
194-659
               

               
Cow position:
               
chr14:39433972-39434419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 74
               

               
Conread position:
               
194-668
               

               
Cow position:
               
chr14:16237215-16237685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 107
               

               
Conread position:
               
194-675
               

               
Cow position:
               
chr14:38549093-38548615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
505
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
134, 75
               

               
Conread position:
               
194-677
               

               
Cow position:
               
chr14:47609300-47609771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 19
               

               
Conread position:
               
194-682
               

               
Cow position:
               
chr14:17899772-17899290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
149, 81
               

               
Conread position:
               
195-336
               

               
Cow position:
               
chr14:45300533-45300674 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
195-678
               

               
Cow position:
               
chr14:11507956-11508423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
456, 157
               

               
Conread position:
               
196-460
               

               
Cow position:
               
chr14:15518091-15518346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
94, 34
               

               
Conread position:
               
196-512
               

               
Cow position:
               
chr14:37678712-37679026 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
53, 70
               

               
Conread position:
               
196-650
               

               
Cow position:
               
chr14:11043203-11043649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 159
               

               
Conread position:
               
197-330
               

               
Cow position:
               
chr14:4731586-4731453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
57, 67
               

               
Conread position:
               
197-330
               

               
Cow position:
               
chr14:16342156-16342287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
134
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
197-342
               

               
Cow position:
               
chr14:19986109-19985964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
197-342
               

               
Cow position:
               
chr14:23527221-23527075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
55, 70
               

               
Conread position:
               
197-347
               

               
Cow position:
               
chr14:4868208-4868356 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
197-357
               

               
Cow position:
               
chr14:41716392-41716236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
197-365
               

               
Cow position:
               
chr14:35650921-35651082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
13, 32
               

               
Conread position:
               
197-365
               

               
Cow position:
               
chr14:45068802-45068967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
133, 92
               

               
Conread position:
               
197-367
               

               
Cow position:
               
chr14:27865847-27866017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
197-368
               

               
Cow position:
               
chr14:15781644-15781817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
38, 134
               

               
Conread position:
               
197-374
               

               
Cow position:
               
chr14:30152435-30152614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
66, 23
               

               
Conread position:
               
197-392
               

               
Cow position:
               
chr14:8495438-8495248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
197-399
               

               
Cow position:
               
chr14:19996603-19996405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
197-399
               

               
Cow position:
               
chr14:46735597-46735393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
197-400
               

               
Cow position:
               
chr14:5501867-5502074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
197-400
               

               
Cow position:
               
chr14:7317121-7316915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
131, 187
               

               
Conread position:
               
197-400
               

               
Cow position:
               
chr14:39518980-39518783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
197-414
               

               
Cow position:
               
chr14:46965843-46965633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
197-437
               

               
Cow position:
               
chr14:39821451-39821213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
145, 15
               

               
Conread position:
               
197-447
               

               
Cow position:
               
chr14:23464530-23464773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
197-447
               

               
Cow position:
               
chr14:24797295-24797535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
187, 12
               

               
Conread position:
               
197-452
               

               
Cow position:
               
chr14:22381270-22381515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
197-454
               

               
Cow position:
               
chr14:4649731-4649975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
227, 81
               

               
Conread position:
               
197-458
               

               
Cow position:
               
chr14:11981938-11981669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
137, 85
               

               
Conread position:
               
197-460
               

               
Cow position:
               
chr14:46489971-46490229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
85, 17
               

               
Conread position:
               
197-463
               

               
Cow position:
               
chr14:5836189-5835933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
17, 84
               

               
Conread position:
               
197-467
               

               
Cow position:
               
chr14:8754611-8754342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
226, 75
               

               
Conread position:
               
197-467
               

               
Cow position:
               
chr14:33209074-33209328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
197-469
               

               
Cow position:
               
chr14:11819839-11820099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
197-469
               

               
Cow position:
               
chr14:41756543-41756285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
132, 16
               

               
Conread position:
               
197-472
               

               
Cow position:
               
chr14:43046429-43046167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
13, 51
               

               
Conread position:
               
197-474
               

               
Cow position:
               
chr14:7482340-7482072 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
197, 67
               

               
Conread position:
               
197-474
               

               
Cow position:
               
chr14:21284914-21284638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
129, 16
               

               
Conread position:
               
197-475
               

               
Cow position:
               
chr14:31734568-31734840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
135, 70
               

               
Conread position:
               
197-475
               

               
Cow position:
               
chr14:35700716-35700439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
57, 132
               

               
Conread position:
               
197-475
               

               
Cow position:
               
chr14:37151356-37151645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
64, 191
               

               
Conread position:
               
197-479
               

               
Cow position:
               
chr14:7558147-7558430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
161, 34
               

               
Conread position:
               
197-479
               

               
Cow position:
               
chr14:33462443-33462177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
162, 15
               

               
Conread position:
               
197-479
               

               
Cow position:
               
chr14:33828434-33828173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
197-479
               

               
Cow position:
               
chr14:42596662-42596394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
147, 42
               

               
Conread position:
               
197-484
               

               
Cow position:
               
chr14:38295991-38296276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 16
               

               
Conread position:
               
197-494
               

               
Cow position:
               
chr14:33326110-33326399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
195, 27
               

               
Conread position:
               
197-498
               

               
Cow position:
               
chr14:24894045-24893760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
276, 129
               

               
Conread position:
               
197-503
               

               
Cow position:
               
chr14:30662272-30661981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
197-504
               

               
Cow position:
               
chr14:25231364-25231664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
212, 76
               

               
Conread position:
               
197-514
               

               
Cow position:
               
chr14:26108925-26108607 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
77, 125
               

               
Conread position:
               
197-530
               

               
Cow position:
               
chr14:20787017-20787348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
144, 150
               

               
Conread position:
               
197-533
               

               
Cow position:
               
chr14:22967036-22966713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
197-544
               

               
Cow position:
               
chr14:34124892-34125238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
228, 62
               

               
Conread position:
               
197-545
               

               
Cow position:
               
chr14:1727779-1728127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
26, 31
               

               
Conread position:
               
197-545
               

               
Cow position:
               
chr14:6246580-6246932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
125, 162
               

               
Conread position:
               
197-545
               

               
Cow position:
               
chr14:12856880-12856544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
231, 15
               

               
Conread position:
               
197-545
               

               
Cow position:
               
chr14:20467828-20468150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
197-545
               

               
Cow position:
               
chr14:22918638-22918296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
197-545
               

               
Cow position:
               
chr14:27039757-27039407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
170, 11
               

               
Conread position:
               
197-545
               

               
Cow position:
               
chr14:47588624-47588284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
197-546
               

               
Cow position:
               
chr14:9285432-9285089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
167, 56
               

               
Conread position:
               
197-550
               

               
Cow position:
               
chr14:20562941-20563294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
209, 130
               

               
Conread position:
               
197-552
               

               
Cow position:
               
chr14:25403659-25403997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
197-552
               

               
Cow position:
               
chr14:27791815-27791480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
337, 128
               

               
Conread position:
               
197-552
               

               
Cow position:
               
chr14:39779038-39778690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 128
               

               
Conread position:
               
197-555
               

               
Cow position:
               
chr14:10697241-10697566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
197-555
               

               
Cow position:
               
chr14:18904323-18904671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
197-558
               

               
Cow position:
               
chr14:48412592-48412950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 62
               

               
Conread position:
               
197-559
               

               
Cow position:
               
chr14:49086588-49086238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
197-560
               

               
Cow position:
               
chr14:16834615-16834252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
133, 82
               

               
Conread position:
               
197-560
               

               
Cow position:
               
chr14:17238648-17238291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
11, 100
               

               
Conread position:
               
197-564
               

               
Cow position:
               
chr14:14187618-14187257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 80
               

               
Conread position:
               
197-565
               

               
Cow position:
               
chr14:19863156-19863509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
342, 15
               

               
Conread position:
               
197-567
               

               
Cow position:
               
chr14:35018471-35018830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
197-569
               

               
Cow position:
               
chr14:9308510-9308150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
368, 85
               

               
Conread position:
               
197-572
               

               
Cow position:
               
chr14:36554866-36555229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 197
               

               
Conread position:
               
197-573
               

               
Cow position:
               
chr14:37883634-37883999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
197-573
               

               
Cow position:
               
chr14:44258199-44257841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
185, 15
               

               
Conread position:
               
197-574
               

               
Cow position:
               
chr14:19189324-19188959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
328, 128
               

               
Conread position:
               
197-574
               

               
Cow position:
               
chr14:45605374-45605014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
56, 15
               

               
Conread position:
               
197-576
               

               
Cow position:
               
chr14:25779379-25779015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
364, 131
               

               
Conread position:
               
197-577
               

               
Cow position:
               
chr14:40269561-40269928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
197-577
               

               
Cow position:
               
chr14:43452895-43453277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 149
               

               
Conread position:
               
197-578
               

               
Cow position:
               
chr14:3195136-3194778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
14, 60
               

               
Conread position:
               
197-578
               

               
Cow position:
               
chr14:17755844-17755482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
7, 84
               

               
Conread position:
               
197-578
               

               
Cow position:
               
chr14:46124978-46125358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
76, 149
               

               
Conread position:
               
197-578
               

               
Cow position:
               
chr14:49021619-49021987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
94, 15
               

               
Conread position:
               
197-579
               

               
Cow position:
               
chr14:22583423-22583066 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
197-579
               

               
Cow position:
               
chr14:26097403-26097784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
129, 15
               

               
Conread position:
               
197-579
               

               
Cow position:
               
chr14:37156153-37155789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
197-580
               

               
Cow position:
               
chr14:9901455-9901094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
197-584
               

               
Cow position:
               
chr14:43249870-43249495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 0
               

               
Conread position:
               
197-585
               

               
Cow position:
               
chr14:39926476-39926117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
197-586
               

               
Cow position:
               
chr14:4991276-4990904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
187, 56
               

               
Conread position:
               
197-586
               

               
Cow position:
               
chr14:37131943-37131566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
197-586
               

               
Cow position:
               
chr14:39618091-39618472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
197-622
               

               
Cow position:
               
chr14:41128175-41127779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
197-629
               

               
Cow position:
               
chr14:8102063-8101663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
173, 58
               

               
Conread position:
               
197-629
               

               
Cow position:
               
chr14:27848485-27848045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
222, 89
               

               
Conread position:
               
197-629
               

               
Cow position:
               
chr14:43561801-43562229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
12, 24
               

               
Conread position:
               
197-647
               

               
Cow position:
               
chr14:48427361-48426920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 131
               

               
Conread position:
               
197-648
               

               
Cow position:
               
chr14:18309026-18309453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
225, 15
               

               
Conread position:
               
197-648
               

               
Cow position:
               
chr14:47672598-47673032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 52
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr14:4226910-4227380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
57, 103
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr14:5222002-5222442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 71
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr14:24237103-24236665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
66, 12
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr14:33791474-33791036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr14:35588442-35588001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
91, 27
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr14:36167218-36166783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
198, 61
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr14:42330639-42330189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
173, 130
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr14:45052723-45052281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr14:48740601-48741023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr14:49929450-49929902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
86, 26
               

               
Conread position:
               
197-654
               

               
Cow position:
               
chr14:28378649-28378198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 80
               

               
Conread position:
               
197-656
               

               
Cow position:
               
chr14:41809367-41809816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
350, 64
               

               
Conread position:
               
197-665
               

               
Cow position:
               
chr14:1716019-1715558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
161, 84
               

               
Conread position:
               
197-665
               

               
Cow position:
               
chr14:45677508-45677058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
236, 70
               

               
Conread position:
               
197-666
               

               
Cow position:
               
chr14:17554199-17554664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
12, 135
               

               
Conread position:
               
197-666
               

               
Cow position:
               
chr14:26116348-26115887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
443, 74
               

               
Conread position:
               
197-666
               

               
Cow position:
               
chr14:44214709-44214236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
159, 11
               

               
Conread position:
               
197-667
               

               
Cow position:
               
chr14:36709407-36708927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
356, 15
               

               
Conread position:
               
197-668
               

               
Cow position:
               
chr14:18484956-18485431 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 304
               

               
Conread position:
               
197-669
               

               
Cow position:
               
chr14:6599669-6600130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 74
               

               
Conread position:
               
197-669
               

               
Cow position:
               
chr14:40230352-40230812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 83
               

               
Conread position:
               
197-670
               

               
Cow position:
               
chr14:35498216-35498671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
167, 95
               

               
Conread position:
               
197-671
               

               
Cow position:
               
chr14:20016422-20016888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 76
               

               
Conread position:
               
197-672
               

               
Cow position:
               
chr14:2937932-2937464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
229, 143
               

               
Conread position:
               
197-672
               

               
Cow position:
               
chr14:10078542-10078077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
366, 12
               

               
Conread position:
               
197-672
               

               
Cow position:
               
chr14:19593855-19594308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 85
               

               
Conread position:
               
197-672
               

               
Cow position:
               
chr14:20932903-20932445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
453, 130
               

               
Conread position:
               
197-672
               

               
Cow position:
               
chr14:21357837-21357381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 98
               

               
Conread position:
               
197-673
               

               
Cow position:
               
chr14:17013793-17013340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
453, 53
               

               
Conread position:
               
197-673
               

               
Cow position:
               
chr14:19850747-19851209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
193, 92
               

               
Conread position:
               
197-673
               

               
Cow position:
               
chr14:39769946-39770397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 17
               

               
Conread position:
               
197-674
               

               
Cow position:
               
chr14:13810222-13809773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
43, 63
               

               
Conread position:
               
197-674
               

               
Cow position:
               
chr14:21201545-21202001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
7, 145
               

               
Conread position:
               
197-675
               

               
Cow position:
               
chr14:20712397-20712863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 266
               

               
Conread position:
               
197-676
               

               
Cow position:
               
chr14:18941019-18941468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
197-679
               

               
Cow position:
               
chr14:13385658-13385182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 16
               

               
Conread position:
               
197-679
               

               
Cow position:
               
chr14:30664286-30663796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
61, 70
               

               
Conread position:
               
197-679
               

               
Cow position:
               
chr14:40253508-40253032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
26, 31
               

               
Conread position:
               
197-679
               

               
Cow position:
               
chr14:47584364-47584849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 86
               

               
Conread position:
               
197-680
               

               
Cow position:
               
chr14:24922391-24921917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 129
               

               
Conread position:
               
197-680
               

               
Cow position:
               
chr14:28304501-28304973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 48
               

               
Conread position:
               
197-681
               

               
Cow position:
               
chr14:26442053-26442536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 132
               

               
Conread position:
               
197-682
               

               
Cow position:
               
chr14:6735581-6736057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
221, 64
               

               
Conread position:
               
197-683
               

               
Cow position:
               
chr14:14326819-14327311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
502
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
143, 162
               

               
Conread position:
               
197-683
               

               
Cow position:
               
chr14:34199557-34200050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
504
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 82
               

               
Conread position:
               
197-683
               

               
Cow position:
               
chr14:35381873-35381391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 84
               

               
Conread position:
               
197-683
               

               
Cow position:
               
chr14:38168968-38168515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 43
               

               
Conread position:
               
197-684
               

               
Cow position:
               
chr14:11810285-11810750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 55
               

               
Conread position:
               
197-684
               

               
Cow position:
               
chr14:19207149-19206680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
96, 88
               

               
Conread position:
               
197-684
               

               
Cow position:
               
chr14:20666740-20667194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
197-684
               

               
Cow position:
               
chr14:30760493-30760027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
164, 120
               

               
Conread position:
               
198-314
               

               
Cow position:
               
chr14:18811835-18811953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
119
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
198-365
               

               
Cow position:
               
chr14:47507388-47507221 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
198-378
               

               
Cow position:
               
chr14:11641291-11641460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
198-552
               

               
Cow position:
               
chr14:39774771-39775112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
113, 71
               

               
Conread position:
               
198-563
               

               
Cow position:
               
chr14:39807175-39807531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
54, 65
               

               
Conread position:
               
198-586
               

               
Cow position:
               
chr14:4109189-4109588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
12, 49
               

               
Conread position:
               
198-638
               

               
Cow position:
               
chr14:41479375-41479804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
146, 72
               

               
Conread position:
               
198-669
               

               
Cow position:
               
chr14:6541438-6541901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
339, 14
               

               
Conread position:
               
198-677
               

               
Cow position:
               
chr14:42154677-42155149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
208, 130
               

               
Conread position:
               
198-681
               

               
Cow position:
               
chr14:38143830-38144296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
198-682
               

               
Cow position:
               
chr14:23090094-23090568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
283, 130
               

               
Conread position:
               
198-682
               

               
Cow position:
               
chr14:23682547-23682082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
182, 16
               

               
Conread position:
               
199-399
               

               
Cow position:
               
chr14:41190597-41190787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
199-412
               

               
Cow position:
               
chr14:19624373-19624161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
88, 142
               

               
Conread position:
               
199-460
               

               
Cow position:
               
chr14:3878735-3878491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
199-460
               

               
Cow position:
               
chr14:24786215-24785975 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
199-460
               

               
Cow position:
               
chr14:24992095-24991852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
199-464
               

               
Cow position:
               
chr14:27312707-27312449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
213, 53
               

               
Conread position:
               
199-470
               

               
Cow position:
               
chr14:35266731-35266990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
147, 92
               

               
Conread position:
               
199-474
               

               
Cow position:
               
chr14:27362327-27362056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
88, 129
               

               
Conread position:
               
199-504
               

               
Cow position:
               
chr14:106292-106581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
199-525
               

               
Cow position:
               
chr14:42902703-42903021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
199-545
               

               
Cow position:
               
chr14:17143854-17143521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
199-552
               

               
Cow position:
               
chr14:35544232-35544566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
207, 129
               

               
Conread position:
               
199-577
               

               
Cow position:
               
chr14:20600664-20600298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
306, 74
               

               
Conread position:
               
199-578
               

               
Cow position:
               
chr14:18657317-18657693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 15
               

               
Conread position:
               
199-580
               

               
Cow position:
               
chr14:28090689-28091051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
298, 128
               

               
Conread position:
               
199-619
               

               
Cow position:
               
chr14:27305439-27305025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
223, 129
               

               
Conread position:
               
199-640
               

               
Cow position:
               
chr14:26432958-26433394 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
151, 120
               

               
Conread position:
               
199-648
               

               
Cow position:
               
chr14:33714405-33714827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
74, 55
               

               
Conread position:
               
199-652
               

               
Cow position:
               
chr14:44237417-44237884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
143, 148
               

               
Conread position:
               
199-653
               

               
Cow position:
               
chr14:8540933-8541365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
156, 65
               

               
Conread position:
               
199-656
               

               
Cow position:
               
chr14:25682227-25681757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 15
               

               
Conread position:
               
199-672
               

               
Cow position:
               
chr14:31130106-31130555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
196, 66
               

               
Conread position:
               
199-673
               

               
Cow position:
               
chr14:26620902-26620444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
199-673
               

               
Cow position:
               
chr14:35420474-35420942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 130
               

               
Conread position:
               
199-675
               

               
Cow position:
               
chr14:22989317-22988854 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
451, 86
               

               
Conread position:
               
199-679
               

               
Cow position:
               
chr14:33773770-33774210 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
241, 13
               

               
Conread position:
               
199-679
               

               
Cow position:
               
chr14:48492502-48492978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
200, 21
               

               
Conread position:
               
199-684
               

               
Cow position:
               
chr14:6490421-6490894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 70
               

               
Conread position:
               
200-351
               

               
Cow position:
               
chr14:29300083-29300229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
200-598
               

               
Cow position:
               
chr14:28795958-28795566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 152
               

               
Conread position:
               
200-628
               

               
Cow position:
               
chr14:44794190-44793761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
20, 12
               

               
Conread position:
               
200-648
               

               
Cow position:
               
chr14:5630443-5630015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
200-665
               

               
Cow position:
               
chr14:41471688-41472149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
143, 54
               

               
Conread position:
               
200-672
               

               
Cow position:
               
chr14:48446878-48447342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
240, 127
               

               
Conread position:
               
201-346
               

               
Cow position:
               
chr14:8989313-8989458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
7, 128
               

               
Conread position:
               
201-368
               

               
Cow position:
               
chr14:35607173-35607339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
160, 125
               

               
Conread position:
               
201-512
               

               
Cow position:
               
chr14:37884130-37884432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
201-543
               

               
Cow position:
               
chr14:6190657-6190984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
315, 153
               

               
Conread position:
               
201-625
               

               
Cow position:
               
chr14:49671345-49670930 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
207, 102
               

               
Conread position:
               
201-652
               

               
Cow position:
               
chr14:12961849-12961441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
202-399
               

               
Cow position:
               
chr14:6233984-6234178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
44, 11
               

               
Conread position:
               
202-579
               

               
Cow position:
               
chr14:19129791-19129417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 91
               

               
Conread position:
               
202-580
               

               
Cow position:
               
chr14:24981734-24981371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
202-652
               

               
Cow position:
               
chr14:19851641-19852093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
46, 61
               

               
Conread position:
               
203-373
               

               
Cow position:
               
chr14:25695659-25695495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
203-399
               

               
Cow position:
               
chr14:19633460-19633268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
203-400
               

               
Cow position:
               
chr14:34020968-34020775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
51, 11
               

               
Conread position:
               
203-460
               

               
Cow position:
               
chr14:39422309-39422563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
203-468
               

               
Cow position:
               
chr14:17397326-17397572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
140, 66
               

               
Conread position:
               
203-475
               

               
Cow position:
               
chr14:15033034-15032769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
183, 74
               

               
Conread position:
               
203-560
               

               
Cow position:
               
chr14:41211135-41210784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
278, 122
               

               
Conread position:
               
203-579
               

               
Cow position:
               
chr14:29632604-29632969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
203-665
               

               
Cow position:
               
chr14:32452535-32452084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 123
               

               
Conread position:
               
203-675
               

               
Cow position:
               
chr14:20640345-20640809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 124
               

               
Conread position:
               
203-679
               

               
Cow position:
               
chr14:10609968-10609497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 86
               

               
Conread position:
               
204-512
               

               
Cow position:
               
chr14:47591641-47591936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
204-521
               

               
Cow position:
               
chr14:24796145-24796464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
28, 125
               

               
Conread position:
               
204-563
               

               
Cow position:
               
chr14:10702555-10702912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
249, 64
               

               
Conread position:
               
204-629
               

               
Cow position:
               
chr14:37890128-37889725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
141, 87
               

               
Conread position:
               
204-673
               

               
Cow position:
               
chr14:10858710-10858263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 89
               

               
Conread position:
               
204-683
               

               
Cow position:
               
chr14:3868152-3868615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
205-422
               

               
Cow position:
               
chr14:15913276-15913482 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
205-459
               

               
Cow position:
               
chr14:44382923-44383178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
197, 19
               

               
Conread position:
               
205-460
               

               
Cow position:
               
chr14:19222158-19221908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
219, 39
               

               
Conread position:
               
205-475
               

               
Cow position:
               
chr14:25378214-25378481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
148, 131
               

               
Conread position:
               
206-597
               

               
Cow position:
               
chr14:32371467-32371848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
7, 27
               

               
Conread position:
               
209-475
               

               
Cow position:
               
chr14:24683857-24684117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
105, 63
               

               
Conread position:
               
210-524
               

               
Cow position:
               
chr14:11614950-11615255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
44, 14
               

               
Conread position:
               
212-641
               

               
Cow position:
               
chr14:48495876-48496293 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
213-648
               

               
Cow position:
               
chr14:8786280-8786690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
60, 90
               

               
Conread position:
               
214-652
               

               
Cow position:
               
chr14:49411389-49410977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
215-511
               

               
Cow position:
               
chr14:25362614-25362323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
197, 103
               

               
Conread position:
               
215-565
               

               
Cow position:
               
chr14:19372610-19372264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
215-573
               

               
Cow position:
               
chr14:15054719-15055074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
320, 110
               

               
Conread position:
               
216-578
               

               
Cow position:
               
chr14:34984131-34983779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
9, 88
               

               
Conread position:
               
216-652
               

               
Cow position:
               
chr14:16434354-16434796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
9, 113
               

               
Conread position:
               
217-504
               

               
Cow position:
               
chr14:50040506-50040223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
68, 86
               

               
Conread position:
               
220-533
               

               
Cow position:
               
chr14:40433183-40432883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
34, 15
               

               
Conread position:
               
220-656
               

               
Cow position:
               
chr14:14979441-14979870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
146, 66
               

               
Conread position:
               
220-664
               

               
Cow position:
               
chr14:12036580-12036997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
220-678
               

               
Cow position:
               
chr14:13846248-13845810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
166, 61
               

               
Conread position:
               
222-515
               

               
Cow position:
               
chr14:31785236-31784939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
74, 137
               

               
Conread position:
               
222-663
               

               
Cow position:
               
chr14:50363065-50362625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
38, 143
               

               
Conread position:
               
222-666
               

               
Cow position:
               
chr14:44742121-44742544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
420, 51
               

               
Conread position:
               
223-670
               

               
Cow position:
               
chr14:28114924-28115366 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
283, 102
               

               
Conread position:
               
224-574
               

               
Cow position:
               
chr14:24387709-24387357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
245, 101
               

               
Conread position:
               
224-580
               

               
Cow position:
               
chr14:40165679-40165336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
224-629
               

               
Cow position:
               
chr14:1645931-1646318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
301, 104
               

               
Conread position:
               
227-492
               

               
Cow position:
               
chr14:6175838-6175582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
227-579
               

               
Cow position:
               
chr14:28004235-28003876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
189, 113
               

               
Conread position:
               
227-682
               

               
Cow position:
               
chr14:37103465-37103016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 61
               

               
Conread position:
               
232-579
               

               
Cow position:
               
chr14:16033257-16032923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
194, 22
               

               
Conread position:
               
232-652
               

               
Cow position:
               
chr14:12667982-12667572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
163, 54
               

               
Conread position:
               
232-683
               

               
Cow position:
               
chr14:11846751-11846310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
437, 168
               

               
Conread position:
               
233-670
               

               
Cow position:
               
chr14:27919489-27919912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
192, 58
               

               
Conread position:
               
234-648
               

               
Cow position:
               
chr14:30017039-30017451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
266, 106
               

               
Conread position:
               
236-652
               

               
Cow position:
               
chr14:50418648-50418259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
108, 39
               

               
Conread position:
               
236-672
               

               
Cow position:
               
chr14:27355649-27355217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
172, 21
               

               
Conread position:
               
237-579
               

               
Cow position:
               
chr14:8750319-8749988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
182, 44
               

               
Conread position:
               
238-679
               

               
Cow position:
               
chr14:13043005-13042575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
59, 92
               

               
Conread position:
               
240-684
               

               
Cow position:
               
chr14:47251980-47252423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
70, 59
               

               
Conread position:
               
241-666
               

               
Cow position:
               
chr14:20110479-20110894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
165, 87
               

               
Conread position:
               
243-652
               

               
Cow position:
               
chr14:26859482-26859894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
108, 152
               

               
Conread position:
               
243-655
               

               
Cow position:
               
chr14:12324663-12324246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
120, 52
               

               
Conread position:
               
243-679
               

               
Cow position:
               
chr14:5996051-5995627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
153, 79
               

               
Conread position:
               
243-683
               

               
Cow position:
               
chr14:1802873-1803309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
287, 85
               

               
Conread position:
               
244-629
               

               
Cow position:
               
chr14:12520071-12520438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
244-684
               

               
Cow position:
               
chr14:20301769-20302193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
245-684
               

               
Cow position:
               
chr14:14948973-14949404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
309, 43
               

               
Conread position:
               
246-531
               

               
Cow position:
               
chr14:26190860-26191145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3.9937e-43
               

               
Alignm gaps (pig, cow):
               
85, 109
               

               
Conread position:
               
248-573
               

               
Cow position:
               
chr14:26490510-26490825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
267, 33
               

               
Conread position:
               
260-654
               

               
Cow position:
               
chr14:2974869-2975245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 76
               

               
Conread position:
               
262-504
               

               
Cow position:
               
chr14:28803521-28803755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
77, 114
               

               
Conread position:
               
262-652
               

               
Cow position:
               
chr14:15313777-15313401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
163, 90
               

               
Conread position:
               
265-521
               

               
Cow position:
               
chr14:32732975-32732721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
87, 63
               

               
Conread position:
               
265-664
               

               
Cow position:
               
chr14:25979484-25979101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
265-665
               

               
Cow position:
               
chr14:7480233-7479835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
165, 45
               

               
Conread position:
               
265-676
               

               
Cow position:
               
chr14:25986737-25986329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
237, 61
               

               
Conread position:
               
267-679
               

               
Cow position:
               
chr14:27338558-27338153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
152, 12
               

               
Conread position:
               
268-578
               

               
Cow position:
               
chr14:15825502-15825193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
68, 158
               

               
Conread position:
               
268-652
               

               
Cow position:
               
chr14:8945867-8946240 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
134, 20
               

               
Conread position:
               
270-580
               

               
Cow position:
               
chr14:19394574-19394271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
293, 5
               

               
Conread position:
               
271-475
               

               
Cow position:
               
chr14:14581080-14580884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
271-654
               

               
Cow position:
               
chr14:7800125-7799758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
149, 22
               

               
Conread position:
               
272-666
               

               
Cow position:
               
chr14:5234669-5235050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
403
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
27, 35
               

               
Conread position:
               
272-681
               

               
Cow position:
               
chr14:21498406-21498797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
256, 16
               

               
Conread position:
               
273-683
               

               
Cow position:
               
chr14:47276490-47276893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
18, 77
               

               
Conread position:
               
275-576
               

               
Cow position:
               
chr14:48961789-48961495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
287, 64
               

               
Conread position:
               
277-676
               

               
Cow position:
               
chr14:14417288-14417685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
20, 76
               

               
Conread position:
               
277-683
               

               
Cow position:
               
chr14:15932090-15931690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
45, 78
               

               
Conread position:
               
279-549
               

               
Cow position:
               
chr14:5573148-5572884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
279-649
               

               
Cow position:
               
chr14:12342613-12342996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6e-37
               

               
Alignm gaps (pig, cow):
               
110, 26
               

               
Conread position:
               
281-614
               

               
Cow position:
               
chr14:19618548-19618871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
281-675
               

               
Cow position:
               
chr14:12244173-12244562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
26, 288
               

               
Conread position:
               
293-571
               

               
Cow position:
               
chr14:1868192-1868464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
91, 9
               

               
Conread position:
               
293-666
               

               
Cow position:
               
chr14:16549812-16550162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
242, 35
               

               
Conread position:
               
294-674
               

               
Cow position:
               
chr14:19321315-19321685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
127, 34
               

               
Conread position:
               
297-641
               

               
Cow position:
               
chr14:40329632-40329295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
47, 51
               

               
Conread position:
               
298-620
               

               
Cow position:
               
chr14:24608153-24607836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
261, 30
               

               
Conread position:
               
298-622
               

               
Cow position:
               
chr14:15492783-15492461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
46, 26
               

               
Conread position:
               
301-677
               

               
Cow position:
               
chr14:4877047-4877411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
126, 25
               

               
Conread position:
               
305-572
               

               
Cow position:
               
chr14:1859434-1859694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
181, 23
               

               
Conread position:
               
305-615
               

               
Cow position:
               
chr14:4202913-4203217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
110, 23
               

               
Conread position:
               
305-622
               

               
Cow position:
               
chr14:27077165-27076839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
109, 23
               

               
Conread position:
               
305-684
               

               
Cow position:
               
chr14:38747846-38747487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
359, 23
               

               
Conread position:
               
306-574
               

               
Cow position:
               
chr14:12035587-12035327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
106, 37
               

               
Conread position:
               
306-652
               

               
Cow position:
               
chr14:21933162-21933502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
113, 18
               

               
Conread position:
               
309-677
               

               
Cow position:
               
chr14:33456864-33457227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 34
               

               
Conread position:
               
312-679
               

               
Cow position:
               
chr14:12511728-12512074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
312-684
               

               
Cow position:
               
chr14:45045779-45045410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
26, 98
               

               
Conread position:
               
315-614
               

               
Cow position:
               
chr14:7420882-7421177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
184, 13
               

               
Conread position:
               
316-654
               

               
Cow position:
               
chr14:49817525-49817845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
317-590
               

               
Cow position:
               
chr14:14317051-14316787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
319-652
               

               
Cow position:
               
chr14:27394294-27394621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
40, 49
               

               
Conread position:
               
320-663
               

               
Cow position:
               
chr14:26654964-26655305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
16, 27
               

               
Conread position:
               
321-677
               

               
Cow position:
               
chr14:13465050-13465415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
63, 85
               

               
Conread position:
               
322-652
               

               
Cow position:
               
chr14:22941555-22941897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
14, 87
               

               
Conread position:
               
322-658
               

               
Cow position:
               
chr14:35503531-35503200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 256
               

               
Conread position:
               
325-605
               

               
Cow position:
               
chr14:27275324-27275049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
57, 93
               

               
Conread position:
               
325-682
               

               
Cow position:
               
chr14:41302668-41303033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
8, 90
               

               
Conread position:
               
327-575
               

               
Cow position:
               
chr14:45718105-45718348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
161, 90
               

               
Conread position:
               
327-579
               

               
Cow position:
               
chr14:42437187-42436936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
13, 137
               

               
Conread position:
               
327-580
               

               
Cow position:
               
chr14:46654384-46654630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
84, 21
               

               
Conread position:
               
327-652
               

               
Cow position:
               
chr14:23424418-23424107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
203, 88
               

               
Conread position:
               
327-652
               

               
Cow position:
               
chr14:23443179-23442868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
203, 88
               

               
Conread position:
               
327-652
               

               
Cow position:
               
chr14:28784330-28784645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
21, 76
               

               
Conread position:
               
327-682
               

               
Cow position:
               
chr14:16344008-16344333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
133, 76
               

               
Conread position:
               
329-673
               

               
Cow position:
               
chr14:40754085-40754423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
65, 247
               

               
Conread position:
               
330-680
               

               
Cow position:
               
chr14:30757000-30756657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
87, 73
               

               
Conread position:
               
336-671
               

               
Cow position:
               
chr14:11469996-11470328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
25, 136
               

               
Conread position:
               
338-652
               

               
Cow position:
               
chr14:7036205-7036517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8.99998e-41
               

               
Alignm gaps (pig, cow):
               
42, 54
               

               
Conread position:
               
338-656
               

               
Cow position:
               
chr14:5025432-5025116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
182, 63
               

               
Conread position:
               
338-667
               

               
Cow position:
               
chr14:11056590-11056905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
346-681
               

               
Cow position:
               
chr14:28153604-28153931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
347-607
               

               
Cow position:
               
chr14:25111641-25111384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
78, 46
               

               
Conread position:
               
349-649
               

               
Cow position:
               
chr14:27823572-27823278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
66, 40
               

               
Conread position:
               
349-658
               

               
Cow position:
               
chr14:1777707-1778010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
117, 55
               

               
Conread position:
               
349-666
               

               
Cow position:
               
chr14:35532897-35533212 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
113, 54
               

               
Conread position:
               
349-684
               

               
Cow position:
               
chr14:1708518-1708848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
111, 45
               

               
Conread position:
               
350-652
               

               
Cow position:
               
chr14:40474699-40474405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
354-652
               

               
Cow position:
               
chr14:6865140-6864841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
23, 71
               

               
Conread position:
               
355-669
               

               
Cow position:
               
chr14:12081005-12081302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
8e-40
               

               
Alignm gaps (pig, cow):
               
298, 48
               

               
Conread position:
               
359-650
               

               
Cow position:
               
chr14:42419145-42419434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
215, 44
               

               
Conread position:
               
359-652
               

               
Cow position:
               
chr14:12634758-12635034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
359-683
               

               
Cow position:
               
chr14:11285704-11285397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
3e-40
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
359-684
               

               
Cow position:
               
chr14:12855665-12855979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
195, 42
               

               
Conread position:
               
360-656
               

               
Cow position:
               
chr14:19193601-19193300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
93, 64
               

               
Conread position:
               
361-652
               

               
Cow position:
               
chr14:21305903-21305616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
64, 26
               

               
Conread position:
               
361-652
               

               
Cow position:
               
chr14:38550356-38550638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
363-650
               

               
Cow position:
               
chr14:4282383-4282665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
363-682
               

               
Cow position:
               
chr14:44557686-44558009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
14, 201
               

               
Conread position:
               
367-649
               

               
Cow position:
               
chr14:10693138-10693411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
370-676
               

               
Cow position:
               
chr14:7621012-7621319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
58, 31
               

               
Conread position:
               
371-652
               

               
Cow position:
               
chr14:7067611-7067891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
32, 40
               

               
Conread position:
               
374-683
               

               
Cow position:
               
chr14:12146365-12146672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
53, 27
               

               
Conread position:
               
376-628
               

               
Cow position:
               
chr14:15306011-15306260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
50, 25
               

               
Conread position:
               
376-659
               

               
Cow position:
               
chr14:36442905-36443181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
376-677
               

               
Cow position:
               
chr14:6655469-6655771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
90, 27
               

               
Conread position:
               
376-683
               

               
Cow position:
               
chr14:39452320-39452027 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
377-682
               

               
Cow position:
               
chr14:24527050-24527352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
49, 24
               

               
Conread position:
               
381-668
               

               
Cow position:
               
chr14:23103889-23104169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
39, 119
               

               
Conread position:
               
381-679
               

               
Cow position:
               
chr14:23962959-23962671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
387-565
               

               
Cow position:
               
chr14:46998137-46997964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
387-571
               

               
Cow position:
               
chr14:3943452-3943631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
387-671
               

               
Cow position:
               
chr14:29965118-29964840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 13
               

               
Conread position:
               
389-670
               

               
Cow position:
               
chr14:27044674-27044962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
177, 14
               

               
Conread position:
               
390-629
               

               
Cow position:
               
chr14:15404796-15404560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
35, 12
               

               
Conread position:
               
390-652
               

               
Cow position:
               
chr14:3498904-3498656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
390-652
               

               
Cow position:
               
chr14:49488059-49487807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
57, 24
               

               
Conread position:
               
390-664
               

               
Cow position:
               
chr14:45312890-45312627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
390-664
               

               
Cow position:
               
chr14:47170256-47170519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
390-678
               

               
Cow position:
               
chr14:4047848-4047567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
35, 16
               

               
Conread position:
               
390-682
               

               
Cow position:
               
chr14:33546256-33546542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
185, 0
               

               
Conread position:
               
391-666
               

               
Cow position:
               
chr14:21371684-21371955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
71, 23
               

               
Conread position:
               
392-620
               

               
Cow position:
               
chr14:45291281-45291496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
25, 12
               

               
Conread position:
               
392-647
               

               
Cow position:
               
chr14:35372110-35372364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
10, 15
               

               
Conread position:
               
392-656
               

               
Cow position:
               
chr14:6085884-6086145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
14, 154
               

               
Conread position:
               
394-668
               

               
Cow position:
               
chr14:38719299-38719025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
32, 14
               

               
Conread position:
               
394-675
               

               
Cow position:
               
chr14:12884364-12884083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
27, 10
               

               
Conread position:
               
398-680
               

               
Cow position:
               
chr14:26172302-26172579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
156, 146
               

               
Conread position:
               
400-670
               

               
Cow position:
               
chr14:23419887-23419617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
104, 21
               

               
Conread position:
               
400-681
               

               
Cow position:
               
chr14:28694627-28694908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
258, 14
               

               
Conread position:
               
401-676
               

               
Cow position:
               
chr14:27885107-27884839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
174, 0
               

               
Conread position:
               
404-651
               

               
Cow position:
               
chr14:27733693-27733452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
15, 115
               

               
Conread position:
               
408-680
               

               
Cow position:
               
chr14:19592543-19592271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
11, 177
               

               
Conread position:
               
409-640
               

               
Cow position:
               
chr14:22865789-22866017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
410-596
               

               
Cow position:
               
chr14:34448892-34449076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
412-628
               

               
Cow position:
               
chr14:22916213-22916427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
413-596
               

               
Cow position:
               
chr14:34399722-34399903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
413-652
               

               
Cow position:
               
chr14:10387736-10387501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
413-684
               

               
Cow position:
               
chr14:11311558-11311830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
12, 20
               

               
Conread position:
               
413-684
               

               
Cow position:
               
chr14:18937073-18937343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
232, 168
               

               
Conread position:
               
413-684
               

               
Cow position:
               
chr14:20984415-20984142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
238, 113
               

               
Conread position:
               
414-629
               

               
Cow position:
               
chr14:15424170-15423957 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
171, 0
               

               
Conread position:
               
415-643
               

               
Cow position:
               
chr14:23440800-23441019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
10, 40
               

               
Conread position:
               
415-684
               

               
Cow position:
               
chr14:28131214-28131485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
12, 170
               

               
Conread position:
               
416-648
               

               
Cow position:
               
chr14:5958913-5959146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
416-652
               

               
Cow position:
               
chr14:10937753-10937513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
46, 165
               

               
Conread position:
               
416-675
               

               
Cow position:
               
chr14:49941082-49940832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
147, 32
               

               
Conread position:
               
416-684
               

               
Cow position:
               
chr14:17335279-17335540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
417-652
               

               
Cow position:
               
chr14:24745010-24744777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
47, 15
               

               
Conread position:
               
417-652
               

               
Cow position:
               
chr14:39415234-39415001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
417-663
               

               
Cow position:
               
chr14:26796710-26796968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
8, 0
               

               
Conread position:
               
417-664
               

               
Cow position:
               
chr14:17475486-17475737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
45, 165
               

               
Conread position:
               
417-665
               

               
Cow position:
               
chr14:34775673-34775919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
417-666
               

               
Cow position:
               
chr14:15428550-15428307 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
417-676
               

               
Cow position:
               
chr14:37446598-37446851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
19, 13
               

               
Conread position:
               
417-680
               

               
Cow position:
               
chr14:29809366-29809113 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
162, 0
               

               
Conread position:
               
417-681
               

               
Cow position:
               
chr14:2173635-2173381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
88, 135
               

               
Conread position:
               
417-683
               

               
Cow position:
               
chr14:27998963-27999230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
34, 51
               

               
Conread position:
               
418-645
               

               
Cow position:
               
chr14:40486568-40486793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
163, 0
               

               
Conread position:
               
418-648
               

               
Cow position:
               
chr14:20481771-20482005 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
168, 79
               

               
Conread position:
               
418-649
               

               
Cow position:
               
chr14:24537237-24537008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
163, 0
               

               
Conread position:
               
418-658
               

               
Cow position:
               
chr14:21535234-21535469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
116, 108
               

               
Conread position:
               
418-676
               

               
Cow position:
               
chr14:1814585-1814841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
37, 148
               

               
Conread position:
               
418-679
               

               
Cow position:
               
chr14:14812148-14812403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
418-684
               

               
Cow position:
               
chr14:26825263-26824997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
232, 163
               

               
Conread position:
               
419-629
               

               
Cow position:
               
chr14:29590538-29590752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
44, 5
               

               
Conread position:
               
419-666
               

               
Cow position:
               
chr14:12072879-12073127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
6, 19
               

               
Conread position:
               
421-572
               

               
Cow position:
               
chr14:16310571-16310419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
135, 0
               

               
Conread position:
               
421-579
               

               
Cow position:
               
chr14:30431499-30431657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
421-622
               

               
Cow position:
               
chr14:42247070-42246874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
421-649
               

               
Cow position:
               
chr14:28924237-28924011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
160, 0
               

               
Conread position:
               
421-651
               

               
Cow position:
               
chr14:8923515-8923743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
149, 141
               

               
Conread position:
               
421-652
               

               
Cow position:
               
chr14:7358095-7357861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
421-654
               

               
Cow position:
               
chr14:42693635-42693868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
228, 137
               

               
Conread position:
               
421-672
               

               
Cow position:
               
chr14:7198567-7198320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
160, 0
               

               
Conread position:
               
421-673
               

               
Cow position:
               
chr14:3949032-3949289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
221, 161
               

               
Conread position:
               
421-682
               

               
Cow position:
               
chr14:20466999-20466748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
228, 41
               

               
Conread position:
               
422-648
               

               
Cow position:
               
chr14:25903599-25903379 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
422-674
               

               
Cow position:
               
chr14:26919065-26918815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
130, 67
               

               
Conread position:
               
423-649
               

               
Cow position:
               
chr14:20501044-20500821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
138, 0
               

               
Conread position:
               
423-652
               

               
Cow position:
               
chr14:28244799-28245025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
423-684
               

               
Cow position:
               
chr14:23078725-23078981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
424-629
               

               
Cow position:
               
chr14:42423157-42422954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
157, 0
               

               
Conread position:
               
424-630
               

               
Cow position:
               
chr14:7872886-7872677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
42, 148
               

               
Conread position:
               
424-647
               

               
Cow position:
               
chr14:41082391-41082615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
28, 160
               

               
Conread position:
               
424-649
               

               
Cow position:
               
chr14:10799234-10799012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
424-656
               

               
Cow position:
               
chr14:6637160-6637390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
32, 96
               

               
Conread position:
               
424-682
               

               
Cow position:
               
chr14:33837553-33837813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
123, 155
               

               
Conread position:
               
425-652
               

               
Cow position:
               
chr14:12509412-12509643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
37, 125
               

               
Conread position:
               
425-671
               

               
Cow position:
               
chr14:18302026-18301780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
109, 200
               

               
Conread position:
               
426-679
               

               
Cow position:
               
chr14:11577132-11576884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
241, 92
               

               
Conread position:
               
427-683
               

               
Cow position:
               
chr14:35065752-35065501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
428-579
               

               
Cow position:
               
chr14:31138679-31138829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
126, 116
               

               
Conread position:
               
428-652
               

               
Cow position:
               
chr14:33229334-33229557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
34, 77
               

               
Conread position:
               
431-640
               

               
Cow position:
               
chr14:18350798-18351012 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
431-652
               

               
Cow position:
               
chr14:18559002-18559214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
432-653
               

               
Cow position:
               
chr14:14224626-14224409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
433-651
               

               
Cow position:
               
chr14:45955338-45955131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
199, 48
               

               
Conread position:
               
433-669
               

               
Cow position:
               
chr14:15469925-15470160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
153, 59
               

               
Conread position:
               
433-669
               

               
Cow position:
               
chr14:20234136-20234367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
217, 142
               

               
Conread position:
               
434-680
               

               
Cow position:
               
chr14:20576893-20577132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
217, 43
               

               
Conread position:
               
434-684
               

               
Cow position:
               
chr14:14318680-14318435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
435-667
               

               
Cow position:
               
chr14:17563982-17563757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
437-666
               

               
Cow position:
               
chr14:16287535-16287312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
213, 46
               

               
Conread position:
               
440-680
               

               
Cow position:
               
chr14:28957940-28957698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
208, 129
               

               
Conread position:
               
441-652
               

               
Cow position:
               
chr14:7127907-7127703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
441-652
               

               
Cow position:
               
chr14:44615099-44615308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
441-652
               

               
Cow position:
               
chr14:44713468-44713259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
441-666
               

               
Cow position:
               
chr14:27364627-27364406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
6, 38
               

               
Conread position:
               
441-671
               

               
Cow position:
               
chr14:20245120-20245345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
210, 140
               

               
Conread position:
               
441-679
               

               
Cow position:
               
chr14:28401856-28401623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
443-652
               

               
Cow position:
               
chr14:24732284-24732077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
111, 104
               

               
Conread position:
               
445-672
               

               
Cow position:
               
chr14:13515947-13516170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
206, 52
               

               
Conread position:
               
446-654
               

               
Cow position:
               
chr14:36425361-36425563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
17, 123
               

               
Conread position:
               
448-678
               

               
Cow position:
               
chr14:34613003-34613236 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
10, 213
               

               
Conread position:
               
449-652
               

               
Cow position:
               
chr14:22202089-22202287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
449-684
               

               
Cow position:
               
chr14:19996404-19996172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
202, 28
               

               
Conread position:
               
450-573
               

               
Cow position:
               
chr14:26456413-26456290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
450-666
               

               
Cow position:
               
chr14:18412551-18412767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
198, 131
               

               
Conread position:
               
450-672
               

               
Cow position:
               
chr14:16205030-16205246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
451-652
               

               
Cow position:
               
chr14:46432108-46431910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
451-680
               

               
Cow position:
               
chr14:7316833-7316606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
198, 131
               

               
Conread position:
               
451-684
               

               
Cow position:
               
chr14:145472-145701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
168, 101
               

               
Conread position:
               
452-644
               

               
Cow position:
               
chr14:3871691-3871881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
452-680
               

               
Cow position:
               
chr14:4664823-4664593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
196, 0
               

               
Conread position:
               
452-684
               

               
Cow position:
               
chr14:6234182-6234412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
102, 95
               

               
Conread position:
               
453-652
               

               
Cow position:
               
chr14:27653202-27653004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
8, 115
               

               
Conread position:
               
453-675
               

               
Cow position:
               
chr14:24597739-24597954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
454-648
               

               
Cow position:
               
chr14:30023161-30023353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
454-652
               

               
Cow position:
               
chr14:34210578-34210771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
103, 42
               

               
Conread position:
               
454-652
               

               
Cow position:
               
chr14:35421046-35421244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
60, 109
               

               
Conread position:
               
454-652
               

               
Cow position:
               
chr14:50519143-50519334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
454-671
               

               
Cow position:
               
chr14:48829703-48829912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
196, 108
               

               
Conread position:
               
454-674
               

               
Cow position:
               
chr14:7094021-7094244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
103, 125
               

               
Conread position:
               
454-677
               

               
Cow position:
               
chr14:24785694-24785476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
202, 113
               

               
Conread position:
               
454-678
               

               
Cow position:
               
chr14:35651749-35651963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
454-679
               

               
Cow position:
               
chr14:4481704-4481491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
455-620
               

               
Cow position:
               
chr14:11576233-11576071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
455-676
               

               
Cow position:
               
chr14:12496520-12496306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
455-682
               

               
Cow position:
               
chr14:30450668-30450443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
193, 56
               

               
Conread position:
               
455-683
               

               
Cow position:
               
chr14:18270396-18270168 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
194, 125
               

               
Conread position:
               
456-667
               

               
Cow position:
               
chr14:37934876-37935082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
101, 120
               

               
Conread position:
               
458-648
               

               
Cow position:
               
chr14:20071103-20070909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
100, 170
               

               
Conread position:
               
458-666
               

               
Cow position:
               
chr14:42439877-42440095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
458-667
               

               
Cow position:
               
chr14:11079483-11079282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
193, 7
               

               
Conread position:
               
460-677
               

               
Cow position:
               
chr14:5668088-5668302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
461-681
               

               
Cow position:
               
chr14:15392243-15392021 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
40, 117
               

               
Conread position:
               
462-649
               

               
Cow position:
               
chr14:10920535-10920722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
462-652
               

               
Cow position:
               
chr14:37243367-37243555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
92, 85
               

               
Conread position:
               
462-667
               

               
Cow position:
               
chr14:41289221-41289424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
462-668
               

               
Cow position:
               
chr14:19832366-19832566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
462-677
               

               
Cow position:
               
chr14:23638306-23638516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
462-679
               

               
Cow position:
               
chr14:28097675-28097460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
463-665
               

               
Cow position:
               
chr14:7581890-7582090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
463-679
               

               
Cow position:
               
chr14:8083225-8083016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
463-680
               

               
Cow position:
               
chr14:19703514-19703726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
191, 0
               

               
Conread position:
               
464-656
               

               
Cow position:
               
chr14:15518374-15518565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
5e-35
               

               
Alignm gaps (pig, cow):
               
187, 112
               

               
Conread position:
               
464-659
               

               
Cow position:
               
chr14:20483672-20483869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
465-662
               

               
Cow position:
               
chr14:23465024-23465220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
105, 117
               

               
Conread position:
               
465-684
               

               
Cow position:
               
chr14:37151915-37152125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
48, 54
               

               
Conread position:
               
470-671
               

               
Cow position:
               
chr14:29282775-29282576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
471-666
               

               
Cow position:
               
chr14:8027541-8027739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
90, 115
               

               
Conread position:
               
471-682
               

               
Cow position:
               
chr14:10838885-10838676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
15, 101
               

               
Conread position:
               
472-674
               

               
Cow position:
               
chr14:36559208-36559407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
178, 93
               

               
Conread position:
               
477-652
               

               
Cow position:
               
chr14:19774207-19774374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
477-666
               

               
Cow position:
               
chr14:26800312-26800124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
173, 105
               

               
Conread position:
               
478-667
               

               
Cow position:
               
chr14:15795907-15796095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
5, 98
               

               
Conread position:
               
483-675
               

               
Cow position:
               
chr14:10440936-10440740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
10, 84
               

               
Conread position:
               
484-654
               

               
Cow position:
               
chr14:23926209-23926380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
72, 142
               

               
Conread position:
               
484-656
               

               
Cow position:
               
chr14:32784109-32784280 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
165, 83
               

               
Conread position:
               
484-666
               

               
Cow position:
               
chr14:21592997-21593174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
164, 83
               

               
Conread position:
               
484-666
               

               
Cow position:
               
chr14:40952277-40952091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
484-676
               

               
Cow position:
               
chr14:22230902-22231090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
175, 73
               

               
Conread position:
               
485-652
               

               
Cow position:
               
chr14:7271245-7271415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
485-666
               

               
Cow position:
               
chr14:31342217-31342038 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
485-681
               

               
Cow position:
               
chr14:19988054-19988247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
489-652
               

               
Cow position:
               
chr14:37504516-37504355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
489-666
               

               
Cow position:
               
chr14:37236371-37236202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
491-664
               

               
Cow position:
               
chr14:3573774-3573601 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
66, 92
               

               
Conread position:
               
491-678
               

               
Cow position:
               
chr14:10939862-10940043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
63, 56
               

               
Conread position:
               
491-681
               

               
Cow position:
               
chr14:7433310-7433498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
492-664
               

               
Cow position:
               
chr14:39996608-39996440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
492-672
               

               
Cow position:
               
chr14:23839165-23839348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
492-684
               

               
Cow position:
               
chr14:11703971-11704165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
156, 90
               

               
Conread position:
               
493-680
               

               
Cow position:
               
chr14:29011046-29011231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-28
               

               
Alignm gaps (pig, cow):
               
157, 89
               

               
Conread position:
               
493-684
               

               
Cow position:
               
chr14:39097505-39097314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
44, 90
               

               
Conread position:
               
494-681
               

               
Cow position:
               
chr14:16769869-16770057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
164, 88
               

               
Conread position:
               
496-682
               

               
Cow position:
               
chr14:12071530-12071715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
153, 86
               

               
Conread position:
               
498-675
               

               
Cow position:
               
chr14:12138009-12137835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-22
               

               
Alignm gaps (pig, cow):
               
150, 83
               

               
Conread position:
               
499-675
               

               
Cow position:
               
chr14:5044662-5044497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
505-676
               

               
Cow position:
               
chr14:10895706-10895871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
520-666
               

               
Cow position:
               
chr14:20441349-20441494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
33, 18
               

               
Conread position:
               
526-684
               

               
Cow position:
               
chr14:36723374-36723215 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
122, 62
               

               
Conread position:
               
527-677
               

               
Cow position:
               
chr14:8994997-8995146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
123, 20
               
Show alignments to all cow chromosomes.