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Cow genome map

           
Conread name:
           
Ss1.1-pigcb_1823.5
        

               
Conread position:
               
79-684
               

               
Cow position:
               
chr17:17683217-17682641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
608
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
301, 210
               

               
Conread position:
               
162-511
               

               
Cow position:
               
chr17:1275283-1275627 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
87, 163
               

               
Conread position:
               
179-684
               

               
Cow position:
               
chr17:12108585-12109080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
507
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
353, 41
               

               
Conread position:
               
180-400
               

               
Cow position:
               
chr17:27819083-27819298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
72, 32
               

               
Conread position:
               
180-579
               

               
Cow position:
               
chr17:15300089-15299708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
16, 101
               

               
Conread position:
               
180-580
               

               
Cow position:
               
chr17:24821650-24822034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
16, 43
               

               
Conread position:
               
180-618
               

               
Cow position:
               
chr17:9697924-9697474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
10, 61
               

               
Conread position:
               
180-665
               

               
Cow position:
               
chr17:24824035-24824499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
379, 22
               

               
Conread position:
               
182-351
               

               
Cow position:
               
chr17:8644821-8644986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
182-395
               

               
Cow position:
               
chr17:21017578-21017787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
182-455
               

               
Cow position:
               
chr17:35311205-35311475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
102, 173
               

               
Conread position:
               
182-586
               

               
Cow position:
               
chr17:17060901-17060504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
28, 73
               

               
Conread position:
               
182-658
               

               
Cow position:
               
chr17:25608722-25608271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
212, 145
               

               
Conread position:
               
182-682
               

               
Cow position:
               
chr17:17059224-17059686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
183-523
               

               
Cow position:
               
chr17:31231329-31231007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
184-560
               

               
Cow position:
               
chr17:11156709-11156341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
5, 146
               

               
Conread position:
               
187-666
               

               
Cow position:
               
chr17:5250773-5250305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
11, 88
               

               
Conread position:
               
188-478
               

               
Cow position:
               
chr17:24549961-24550248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
10, 22
               

               
Conread position:
               
191-565
               

               
Cow position:
               
chr17:25032679-25032324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
201, 91
               

               
Conread position:
               
191-643
               

               
Cow position:
               
chr17:32138607-32138185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
372, 63
               

               
Conread position:
               
192-392
               

               
Cow position:
               
chr17:3683863-3683671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
192-475
               

               
Cow position:
               
chr17:3471215-3471487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
192-482
               

               
Cow position:
               
chr17:33291016-33290736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
202, 20
               

               
Conread position:
               
192-494
               

               
Cow position:
               
chr17:19998929-19999228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
279, 135
               

               
Conread position:
               
192-664
               

               
Cow position:
               
chr17:36265442-36264993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
352, 61
               

               
Conread position:
               
194-367
               

               
Cow position:
               
chr17:40312517-40312689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
134, 0
               

               
Conread position:
               
194-454
               

               
Cow position:
               
chr17:4436435-4436183 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
215, 75
               

               
Conread position:
               
194-457
               

               
Cow position:
               
chr17:21313009-21312759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
194-493
               

               
Cow position:
               
chr17:12059294-12059007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
194-565
               

               
Cow position:
               
chr17:22806742-22806385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
98, 16
               

               
Conread position:
               
194-652
               

               
Cow position:
               
chr17:31481250-31480790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
16, 139
               

               
Conread position:
               
194-664
               

               
Cow position:
               
chr17:11397462-11397919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
246, 132
               

               
Conread position:
               
194-677
               

               
Cow position:
               
chr17:17179832-17180304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
153, 62
               

               
Conread position:
               
194-684
               

               
Cow position:
               
chr17:43717514-43717067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
309, 15
               

               
Conread position:
               
195-456
               

               
Cow position:
               
chr17:17496324-17496580 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
195-580
               

               
Cow position:
               
chr17:8079114-8079487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
379, 40
               

               
Conread position:
               
195-675
               

               
Cow position:
               
chr17:24787224-24786757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
278, 129
               

               
Conread position:
               
196-579
               

               
Cow position:
               
chr17:32273884-32273515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
10, 18
               

               
Conread position:
               
197-326
               

               
Cow position:
               
chr17:3153973-3153844 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
102
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
197-326
               

               
Cow position:
               
chr17:13124937-13124807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
197-330
               

               
Cow position:
               
chr17:10220280-10220412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
135
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
54, 15
               

               
Conread position:
               
197-338
               

               
Cow position:
               
chr17:30999575-30999708 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
197-342
               

               
Cow position:
               
chr17:3095624-3095769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
197-342
               

               
Cow position:
               
chr17:23680783-23680922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
197-342
               

               
Cow position:
               
chr17:26757529-26757673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
45, 131
               

               
Conread position:
               
197-350
               

               
Cow position:
               
chr17:26224317-26224467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
197-357
               

               
Cow position:
               
chr17:13409555-13409396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
197-367
               

               
Cow position:
               
chr17:16117630-16117460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
13, 132
               

               
Conread position:
               
197-373
               

               
Cow position:
               
chr17:3182785-3182616 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
197-373
               

               
Cow position:
               
chr17:21363207-21363380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
135, 15
               

               
Conread position:
               
197-373
               

               
Cow position:
               
chr17:25168112-25168287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
103, 12
               

               
Conread position:
               
197-373
               

               
Cow position:
               
chr17:27142555-27142728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
197-377
               

               
Cow position:
               
chr17:1358998-1358828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
197-382
               

               
Cow position:
               
chr17:3258296-3258473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
197-386
               

               
Cow position:
               
chr17:24876937-24877125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
183, 143
               

               
Conread position:
               
197-388
               

               
Cow position:
               
chr17:21710304-21710489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
197-397
               

               
Cow position:
               
chr17:20835392-20835589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
197-400
               

               
Cow position:
               
chr17:5380765-5380966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
10, 45
               

               
Conread position:
               
197-400
               

               
Cow position:
               
chr17:7041146-7040951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
120, 72
               

               
Conread position:
               
197-400
               

               
Cow position:
               
chr17:15363762-15363566 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
133, 13
               

               
Conread position:
               
197-410
               

               
Cow position:
               
chr17:3306667-3306872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
187, 15
               

               
Conread position:
               
197-422
               

               
Cow position:
               
chr17:31232131-31231914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
197-425
               

               
Cow position:
               
chr17:21874517-21874287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
131, 65
               

               
Conread position:
               
197-441
               

               
Cow position:
               
chr17:27162451-27162686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
7, 16
               

               
Conread position:
               
197-447
               

               
Cow position:
               
chr17:966940-966706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
197-447
               

               
Cow position:
               
chr17:5896111-5895870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
197-447
               

               
Cow position:
               
chr17:15067824-15067585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
197-449
               

               
Cow position:
               
chr17:32651415-32651660 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
129, 85
               

               
Conread position:
               
197-451
               

               
Cow position:
               
chr17:1061263-1061013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
209, 54
               

               
Conread position:
               
197-451
               

               
Cow position:
               
chr17:4721286-4721538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
134, 58
               

               
Conread position:
               
197-455
               

               
Cow position:
               
chr17:31263503-31263249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
129, 0
               

               
Conread position:
               
197-457
               

               
Cow position:
               
chr17:27679445-27679187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
160, 191
               

               
Conread position:
               
197-460
               

               
Cow position:
               
chr17:242434-242691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
8, 95
               

               
Conread position:
               
197-460
               

               
Cow position:
               
chr17:1295772-1295518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
197-460
               

               
Cow position:
               
chr17:5246695-5246947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
197-460
               

               
Cow position:
               
chr17:11056576-11056316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
9, 75
               

               
Conread position:
               
197-460
               

               
Cow position:
               
chr17:18884548-18884277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
61, 12
               

               
Conread position:
               
197-460
               

               
Cow position:
               
chr17:21031587-21031840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
226, 12
               

               
Conread position:
               
197-460
               

               
Cow position:
               
chr17:42347422-42347171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
223, 96
               

               
Conread position:
               
197-464
               

               
Cow position:
               
chr17:33121887-33122149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
62, 11
               

               
Conread position:
               
197-469
               

               
Cow position:
               
chr17:13143891-13143626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
223, 84
               

               
Conread position:
               
197-473
               

               
Cow position:
               
chr17:25181350-25181077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
114, 132
               

               
Conread position:
               
197-475
               

               
Cow position:
               
chr17:11171595-11171861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
197-475
               

               
Cow position:
               
chr17:25590437-25590166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
24, 15
               

               
Conread position:
               
197-479
               

               
Cow position:
               
chr17:9778050-9778315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
197-479
               

               
Cow position:
               
chr17:20839759-20839494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
264, 12
               

               
Conread position:
               
197-479
               

               
Cow position:
               
chr17:41290218-41289950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
197-479
               

               
Cow position:
               
chr17:44232921-44232640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
33, 132
               

               
Conread position:
               
197-482
               

               
Cow position:
               
chr17:26183021-26183303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
130, 77
               

               
Conread position:
               
197-503
               

               
Cow position:
               
chr17:20870294-20870002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
162, 12
               

               
Conread position:
               
197-504
               

               
Cow position:
               
chr17:21620513-21620819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
265, 130
               

               
Conread position:
               
197-504
               

               
Cow position:
               
chr17:21628281-21628575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
197-504
               

               
Cow position:
               
chr17:34316909-34316620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
197-512
               

               
Cow position:
               
chr17:8279908-8279602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
57, 16
               

               
Conread position:
               
197-512
               

               
Cow position:
               
chr17:40421468-40421776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
197-521
               

               
Cow position:
               
chr17:923679-923993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
128, 16
               

               
Conread position:
               
197-521
               

               
Cow position:
               
chr17:5006692-5006376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
67, 49
               

               
Conread position:
               
197-522
               

               
Cow position:
               
chr17:3781843-3782158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
13, 81
               

               
Conread position:
               
197-530
               

               
Cow position:
               
chr17:11172816-11172492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
237, 67
               

               
Conread position:
               
197-545
               

               
Cow position:
               
chr17:3152524-3152186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
197-545
               

               
Cow position:
               
chr17:43008517-43008860 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
207, 129
               

               
Conread position:
               
197-549
               

               
Cow position:
               
chr17:5224202-5224541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
197-558
               

               
Cow position:
               
chr17:7760664-7760322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
197-558
               

               
Cow position:
               
chr17:9565108-9565451 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
197-559
               

               
Cow position:
               
chr17:1020768-1020409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
83, 132
               

               
Conread position:
               
197-565
               

               
Cow position:
               
chr17:21495176-21495529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
197-566
               

               
Cow position:
               
chr17:26764813-26765182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
171, 16
               

               
Conread position:
               
197-567
               

               
Cow position:
               
chr17:24580500-24580135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 15
               

               
Conread position:
               
197-567
               

               
Cow position:
               
chr17:41029751-41030097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
13, 81
               

               
Conread position:
               
197-569
               

               
Cow position:
               
chr17:19891414-19891786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
57, 68
               

               
Conread position:
               
197-570
               

               
Cow position:
               
chr17:30718620-30718255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
223, 94
               

               
Conread position:
               
197-572
               

               
Cow position:
               
chr17:5423272-5422904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 15
               

               
Conread position:
               
197-573
               

               
Cow position:
               
chr17:25796541-25796171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
197-573
               

               
Cow position:
               
chr17:38200967-38200597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 130
               

               
Conread position:
               
197-574
               

               
Cow position:
               
chr17:5767713-5768071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
55, 60
               

               
Conread position:
               
197-574
               

               
Cow position:
               
chr17:12220139-12219772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
197-574
               

               
Cow position:
               
chr17:21755642-21755269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
129, 92
               

               
Conread position:
               
197-574
               

               
Cow position:
               
chr17:23246011-23246367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
217, 30
               

               
Conread position:
               
197-574
               

               
Cow position:
               
chr17:27429377-27429732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
222, 131
               

               
Conread position:
               
197-578
               

               
Cow position:
               
chr17:1410442-1410064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
345, 11
               

               
Conread position:
               
197-578
               

               
Cow position:
               
chr17:18860921-18860565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
10, 73
               

               
Conread position:
               
197-579
               

               
Cow position:
               
chr17:9567988-9567614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
325, 92
               

               
Conread position:
               
197-579
               

               
Cow position:
               
chr17:9746320-9746683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
57, 12
               

               
Conread position:
               
197-579
               

               
Cow position:
               
chr17:18592238-18592615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
13, 129
               

               
Conread position:
               
197-579
               

               
Cow position:
               
chr17:20083713-20083351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
244, 72
               

               
Conread position:
               
197-579
               

               
Cow position:
               
chr17:21335899-21335521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 128
               

               
Conread position:
               
197-579
               

               
Cow position:
               
chr17:24553803-24554167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
197-580
               

               
Cow position:
               
chr17:5255577-5255194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
269, 130
               

               
Conread position:
               
197-580
               

               
Cow position:
               
chr17:38832841-38833218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
255, 84
               

               
Conread position:
               
197-584
               

               
Cow position:
               
chr17:17405937-17406309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
187, 104
               

               
Conread position:
               
197-584
               

               
Cow position:
               
chr17:32989292-32989653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
197-584
               

               
Cow position:
               
chr17:32993814-32993447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
197-586
               

               
Cow position:
               
chr17:4225692-4225324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
360, 92
               

               
Conread position:
               
197-586
               

               
Cow position:
               
chr17:9117442-9117817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
197-586
               

               
Cow position:
               
chr17:40289204-40288822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
54, 17
               

               
Conread position:
               
197-607
               

               
Cow position:
               
chr17:18109287-18108891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
414
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
76, 56
               

               
Conread position:
               
197-610
               

               
Cow position:
               
chr17:1493357-1492948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 42
               

               
Conread position:
               
197-610
               

               
Cow position:
               
chr17:18495712-18495321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
13, 52
               

               
Conread position:
               
197-615
               

               
Cow position:
               
chr17:7697855-7698257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
390, 22
               

               
Conread position:
               
197-615
               

               
Cow position:
               
chr17:25097262-25097656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
197-618
               

               
Cow position:
               
chr17:4612278-4611855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
150, 73
               

               
Conread position:
               
197-620
               

               
Cow position:
               
chr17:2810420-2810842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 74
               

               
Conread position:
               
197-622
               

               
Cow position:
               
chr17:34079299-34078898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 16
               

               
Conread position:
               
197-625
               

               
Cow position:
               
chr17:28285227-28284818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
159, 13
               

               
Conread position:
               
197-627
               

               
Cow position:
               
chr17:39771195-39771617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
106, 112
               

               
Conread position:
               
197-629
               

               
Cow position:
               
chr17:15188280-15187852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
211, 36
               

               
Conread position:
               
197-639
               

               
Cow position:
               
chr17:23101412-23100995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
114, 129
               

               
Conread position:
               
197-643
               

               
Cow position:
               
chr17:22563982-22564409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 62
               

               
Conread position:
               
197-644
               

               
Cow position:
               
chr17:33052662-33053086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
290, 72
               

               
Conread position:
               
197-648
               

               
Cow position:
               
chr17:11101995-11101582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
197-648
               

               
Cow position:
               
chr17:11296434-11296875 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
217, 129
               

               
Conread position:
               
197-648
               

               
Cow position:
               
chr17:12929744-12929292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
265, 131
               

               
Conread position:
               
197-648
               

               
Cow position:
               
chr17:40741446-40741890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 104
               

               
Conread position:
               
197-650
               

               
Cow position:
               
chr17:33288855-33288420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
197-651
               

               
Cow position:
               
chr17:8365947-8366415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
228, 94
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr17:1035805-1035353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
26, 99
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr17:7810940-7810506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
75, 129
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr17:11281308-11280851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
10, 18
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr17:11832337-11831878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
89, 12
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr17:14050394-14049970 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
136, 30
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr17:20022718-20022274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
118, 71
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr17:20093325-20092889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
11, 31
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr17:20157416-20157848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
219, 12
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr17:20848330-20848768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 15
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr17:21739085-21738625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
104, 153
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr17:24004193-24004613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
358, 58
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr17:25128550-25128114 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr17:27274361-27274808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
182, 77
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr17:37163728-37163305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 0
               

               
Conread position:
               
197-653
               

               
Cow position:
               
chr17:40331568-40332020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
182, 15
               

               
Conread position:
               
197-654
               

               
Cow position:
               
chr17:20090822-20090387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
338, 80
               

               
Conread position:
               
197-655
               

               
Cow position:
               
chr17:26230739-26231208 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 15
               

               
Conread position:
               
197-656
               

               
Cow position:
               
chr17:21870939-21870483 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
145, 92
               

               
Conread position:
               
197-658
               

               
Cow position:
               
chr17:21004032-21003585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 95
               

               
Conread position:
               
197-659
               

               
Cow position:
               
chr17:1783807-1783378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
215, 15
               

               
Conread position:
               
197-664
               

               
Cow position:
               
chr17:6423560-6424006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
204, 16
               

               
Conread position:
               
197-665
               

               
Cow position:
               
chr17:16371051-16371514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
350, 15
               

               
Conread position:
               
197-665
               

               
Cow position:
               
chr17:32279108-32278648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 103
               

               
Conread position:
               
197-665
               

               
Cow position:
               
chr17:34948439-34948891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
7, 95
               

               
Conread position:
               
197-666
               

               
Cow position:
               
chr17:5898725-5898270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
284, 17
               

               
Conread position:
               
197-666
               

               
Cow position:
               
chr17:12289616-12289156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 94
               

               
Conread position:
               
197-666
               

               
Cow position:
               
chr17:15103089-15102635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
197-666
               

               
Cow position:
               
chr17:20800615-20801068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
197-666
               

               
Cow position:
               
chr17:40771629-40772083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
67, 132
               

               
Conread position:
               
197-668
               

               
Cow position:
               
chr17:26818653-26818216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
197-669
               

               
Cow position:
               
chr17:11664789-11664322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
180, 12
               

               
Conread position:
               
197-671
               

               
Cow position:
               
chr17:5730723-5731181 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
228, 13
               

               
Conread position:
               
197-672
               

               
Cow position:
               
chr17:25815407-25815853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 65
               

               
Conread position:
               
197-673
               

               
Cow position:
               
chr17:42419532-42419965 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
197-674
               

               
Cow position:
               
chr17:21115149-21114695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
197-674
               

               
Cow position:
               
chr17:25900998-25901473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 11
               

               
Conread position:
               
197-674
               

               
Cow position:
               
chr17:32419319-32418855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 128
               

               
Conread position:
               
197-675
               

               
Cow position:
               
chr17:10528942-10528470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
214, 351
               

               
Conread position:
               
197-676
               

               
Cow position:
               
chr17:21959880-21959417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
451, 16
               

               
Conread position:
               
197-677
               

               
Cow position:
               
chr17:18490332-18490794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 58
               

               
Conread position:
               
197-678
               

               
Cow position:
               
chr17:7132656-7132157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
210, 129
               

               
Conread position:
               
197-678
               

               
Cow position:
               
chr17:11618379-11618849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
197-679
               

               
Cow position:
               
chr17:6936865-6936418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
8, 79
               

               
Conread position:
               
197-680
               

               
Cow position:
               
chr17:5280843-5280381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 47
               

               
Conread position:
               
197-681
               

               
Cow position:
               
chr17:17951042-17951499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
195, 91
               

               
Conread position:
               
197-682
               

               
Cow position:
               
chr17:11381921-11381449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 95
               

               
Conread position:
               
197-682
               

               
Cow position:
               
chr17:30665072-30665541 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
454, 15
               

               
Conread position:
               
197-684
               

               
Cow position:
               
chr17:6155840-6156309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
453, 74
               

               
Conread position:
               
197-684
               

               
Cow position:
               
chr17:13922272-13922756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 129
               

               
Conread position:
               
197-684
               

               
Cow position:
               
chr17:13940523-13940046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
359, 96
               

               
Conread position:
               
197-684
               

               
Cow position:
               
chr17:18201573-18202034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
472, 63
               

               
Conread position:
               
197-684
               

               
Cow position:
               
chr17:20033117-20032635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 143
               

               
Conread position:
               
197-684
               

               
Cow position:
               
chr17:29080365-29080806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
468, 15
               

               
Conread position:
               
197-684
               

               
Cow position:
               
chr17:32027663-32027174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 0
               

               
Conread position:
               
198-365
               

               
Cow position:
               
chr17:12054520-12054682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
128, 16
               

               
Conread position:
               
198-373
               

               
Cow position:
               
chr17:3498864-3498695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
55, 84
               

               
Conread position:
               
198-429
               

               
Cow position:
               
chr17:12216277-12216048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
186, 127
               

               
Conread position:
               
198-475
               

               
Cow position:
               
chr17:20912698-20912956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
151, 14
               

               
Conread position:
               
198-519
               

               
Cow position:
               
chr17:25542012-25541705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
214, 22
               

               
Conread position:
               
198-545
               

               
Cow position:
               
chr17:8223552-8223893 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
205, 128
               

               
Conread position:
               
198-586
               

               
Cow position:
               
chr17:32366085-32366472 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
207, 19
               

               
Conread position:
               
198-641
               

               
Cow position:
               
chr17:5514559-5514986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
198-652
               

               
Cow position:
               
chr17:9853786-9854222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
367, 130
               

               
Conread position:
               
198-652
               

               
Cow position:
               
chr17:11216083-11215653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 71
               

               
Conread position:
               
198-666
               

               
Cow position:
               
chr17:20780312-20780778 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
268, 10
               

               
Conread position:
               
198-666
               

               
Cow position:
               
chr17:24587418-24587880 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
455, 139
               

               
Conread position:
               
198-668
               

               
Cow position:
               
chr17:32471991-32471531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 12
               

               
Conread position:
               
198-669
               

               
Cow position:
               
chr17:24973750-24974200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
7, 95
               

               
Conread position:
               
199-367
               

               
Cow position:
               
chr17:38116213-38116376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
199-392
               

               
Cow position:
               
chr17:21412446-21412257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
189, 127
               

               
Conread position:
               
199-460
               

               
Cow position:
               
chr17:33403139-33402883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
106, 0
               

               
Conread position:
               
199-473
               

               
Cow position:
               
chr17:27305960-27306226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
199-475
               

               
Cow position:
               
chr17:8690639-8690373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
199-478
               

               
Cow position:
               
chr17:6624059-6624327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
199-528
               

               
Cow position:
               
chr17:17121479-17121792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
209, 82
               

               
Conread position:
               
199-565
               

               
Cow position:
               
chr17:21243985-21243632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
217, 13
               

               
Conread position:
               
199-576
               

               
Cow position:
               
chr17:21680569-21680948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
213, 144
               

               
Conread position:
               
199-577
               

               
Cow position:
               
chr17:2662210-2662593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
133, 212
               

               
Conread position:
               
199-578
               

               
Cow position:
               
chr17:24077205-24077572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 19
               

               
Conread position:
               
199-627
               

               
Cow position:
               
chr17:25189081-25189505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
106, 13
               

               
Conread position:
               
199-648
               

               
Cow position:
               
chr17:20993238-20992802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
199-649
               

               
Cow position:
               
chr17:10446717-10447150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
360, 153
               

               
Conread position:
               
199-652
               

               
Cow position:
               
chr17:16446628-16446186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
30, 45
               

               
Conread position:
               
199-652
               

               
Cow position:
               
chr17:21434928-21434488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 127
               

               
Conread position:
               
199-652
               

               
Cow position:
               
chr17:25875213-25875635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 74
               

               
Conread position:
               
199-666
               

               
Cow position:
               
chr17:18720647-18720196 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 62
               

               
Conread position:
               
199-678
               

               
Cow position:
               
chr17:23063512-23063992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 79
               

               
Conread position:
               
199-679
               

               
Cow position:
               
chr17:30529735-30529287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
464, 47
               

               
Conread position:
               
199-682
               

               
Cow position:
               
chr17:27795449-27795923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 45
               

               
Conread position:
               
199-684
               

               
Cow position:
               
chr17:15684306-15684775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
62, 94
               

               
Conread position:
               
199-684
               

               
Cow position:
               
chr17:29472276-29472734 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
449, 93
               

               
Conread position:
               
200-501
               

               
Cow position:
               
chr17:2034347-2034623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
200-501
               

               
Cow position:
               
chr17:7648022-7648306 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
167, 92
               

               
Conread position:
               
200-502
               

               
Cow position:
               
chr17:4601745-4601450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
188, 12
               

               
Conread position:
               
200-629
               

               
Cow position:
               
chr17:14026113-14025690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
125, 36
               

               
Conread position:
               
200-640
               

               
Cow position:
               
chr17:11361985-11362404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
144, 58
               

               
Conread position:
               
200-652
               

               
Cow position:
               
chr17:1256702-1256258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 152
               

               
Conread position:
               
200-663
               

               
Cow position:
               
chr17:34595742-34596179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
84, 12
               

               
Conread position:
               
200-668
               

               
Cow position:
               
chr17:21599880-21599425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
200-668
               

               
Cow position:
               
chr17:24490323-24490800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
201, 392
               

               
Conread position:
               
200-672
               

               
Cow position:
               
chr17:38614758-38615225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
225, 73
               

               
Conread position:
               
201-423
               

               
Cow position:
               
chr17:21697536-21697754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
201-479
               

               
Cow position:
               
chr17:15333908-15333638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
201-539
               

               
Cow position:
               
chr17:39790496-39790829 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
339
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
201-575
               

               
Cow position:
               
chr17:27047966-27048323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
201-578
               

               
Cow position:
               
chr17:9911566-9911928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 92
               

               
Conread position:
               
201-648
               

               
Cow position:
               
chr17:20889178-20889600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 11
               

               
Conread position:
               
201-664
               

               
Cow position:
               
chr17:10459133-10458681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
8, 24
               

               
Conread position:
               
202-371
               

               
Cow position:
               
chr17:29040661-29040499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
51, 63
               

               
Conread position:
               
202-652
               

               
Cow position:
               
chr17:33933933-33933508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
221, 71
               

               
Conread position:
               
202-675
               

               
Cow position:
               
chr17:15664474-15664938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
190, 11
               

               
Conread position:
               
203-426
               

               
Cow position:
               
chr17:20234032-20234249 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
203-467
               

               
Cow position:
               
chr17:26881532-26881271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
203-471
               

               
Cow position:
               
chr17:21207330-21207077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
203-475
               

               
Cow position:
               
chr17:30539442-30539191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
203-475
               

               
Cow position:
               
chr17:32950077-32950343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
16, 25
               

               
Conread position:
               
203-523
               

               
Cow position:
               
chr17:28539842-28540144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
290, 47
               

               
Conread position:
               
203-556
               

               
Cow position:
               
chr17:4213561-4213891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
278, 123
               

               
Conread position:
               
203-560
               

               
Cow position:
               
chr17:41892262-41891909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
51, 9
               

               
Conread position:
               
203-568
               

               
Cow position:
               
chr17:43141911-43141548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
181, 69
               

               
Conread position:
               
203-590
               

               
Cow position:
               
chr17:37482274-37481889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
277
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
77, 126
               

               
Conread position:
               
203-652
               

               
Cow position:
               
chr17:29292562-29292150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
102, 76
               

               
Conread position:
               
203-653
               

               
Cow position:
               
chr17:25999921-26000362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 84
               

               
Conread position:
               
203-654
               

               
Cow position:
               
chr17:12447593-12447160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
209, 23
               

               
Conread position:
               
203-665
               

               
Cow position:
               
chr17:33275941-33275509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
203-680
               

               
Cow position:
               
chr17:11839503-11839990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
499
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
127, 65
               

               
Conread position:
               
204-652
               

               
Cow position:
               
chr17:26515930-26515473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
193, 85
               

               
Conread position:
               
204-657
               

               
Cow position:
               
chr17:11278226-11277781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
447, 41
               

               
Conread position:
               
204-668
               

               
Cow position:
               
chr17:17222147-17222600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
6, 70
               

               
Conread position:
               
205-399
               

               
Cow position:
               
chr17:37857927-37857729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
40, 87
               

               
Conread position:
               
205-541
               

               
Cow position:
               
chr17:553163-552836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
70, 9
               

               
Conread position:
               
205-659
               

               
Cow position:
               
chr17:44147165-44146726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
412, 7
               

               
Conread position:
               
207-578
               

               
Cow position:
               
chr17:8544115-8544476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
258, 63
               

               
Conread position:
               
209-472
               

               
Cow position:
               
chr17:34208009-34207750 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
198, 83
               

               
Conread position:
               
209-561
               

               
Cow position:
               
chr17:12536657-12536311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
213, 72
               

               
Conread position:
               
209-640
               

               
Cow position:
               
chr17:24773494-24773904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
214, 77
               

               
Conread position:
               
210-640
               

               
Cow position:
               
chr17:1063001-1063396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
275, 68
               

               
Conread position:
               
211-545
               

               
Cow position:
               
chr17:21299545-21299219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
212-373
               

               
Cow position:
               
chr17:32554212-32554056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
212-427
               

               
Cow position:
               
chr17:11386328-11386540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
116, 79
               

               
Conread position:
               
212-475
               

               
Cow position:
               
chr17:24761412-24761160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
212-651
               

               
Cow position:
               
chr17:21973319-21972888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
172, 48
               

               
Conread position:
               
212-652
               

               
Cow position:
               
chr17:908560-908979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
212-671
               

               
Cow position:
               
chr17:36454950-36454518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
213, 20
               

               
Conread position:
               
213-684
               

               
Cow position:
               
chr17:25611908-25612358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
214-368
               

               
Cow position:
               
chr17:43527793-43527941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
214-423
               

               
Cow position:
               
chr17:22781503-22781709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
214-647
               

               
Cow position:
               
chr17:14033828-14033406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 111
               

               
Conread position:
               
214-652
               

               
Cow position:
               
chr17:3202585-3202171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
211, 45
               

               
Conread position:
               
214-652
               

               
Cow position:
               
chr17:22032878-22032448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
280, 111
               

               
Conread position:
               
214-675
               

               
Cow position:
               
chr17:36790955-36791385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
153, 57
               

               
Conread position:
               
215-533
               

               
Cow position:
               
chr17:3503403-3503707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
197, 58
               

               
Conread position:
               
215-597
               

               
Cow position:
               
chr17:20126431-20126785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
216-622
               

               
Cow position:
               
chr17:36203672-36203273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
110, 61
               

               
Conread position:
               
220-576
               

               
Cow position:
               
chr17:5900200-5900538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
176, 52
               

               
Conread position:
               
221-683
               

               
Cow position:
               
chr17:24149000-24149455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 179
               

               
Conread position:
               
223-560
               

               
Cow position:
               
chr17:12590988-12591327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
243, 102
               

               
Conread position:
               
224-652
               

               
Cow position:
               
chr17:8837123-8836711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
192, 44
               

               
Conread position:
               
227-566
               

               
Cow position:
               
chr17:20990365-20990031 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
117, 54
               

               
Conread position:
               
227-671
               

               
Cow position:
               
chr17:20932158-20932588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
230-652
               

               
Cow position:
               
chr17:21918042-21917610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
194, 51
               

               
Conread position:
               
231-684
               

               
Cow position:
               
chr17:12306563-12306134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
236, 91
               

               
Conread position:
               
232-482
               

               
Cow position:
               
chr17:10510828-10510582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
232-650
               

               
Cow position:
               
chr17:21415005-21414592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
234, 93
               

               
Conread position:
               
232-650
               

               
Cow position:
               
chr17:21437488-21437075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
234, 94
               

               
Conread position:
               
233-559
               

               
Cow position:
               
chr17:979318-979015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
233-649
               

               
Cow position:
               
chr17:34650278-34650700 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
173, 12
               

               
Conread position:
               
236-652
               

               
Cow position:
               
chr17:7142702-7143097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
236-652
               

               
Cow position:
               
chr17:27058715-27058309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
322, 60
               

               
Conread position:
               
237-629
               

               
Cow position:
               
chr17:18419511-18419902 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
225, 103
               

               
Conread position:
               
237-659
               

               
Cow position:
               
chr17:25916731-25917133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
156, 90
               

               
Conread position:
               
237-666
               

               
Cow position:
               
chr17:12946526-12946106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
92, 56
               

               
Conread position:
               
237-679
               

               
Cow position:
               
chr17:13907420-13906971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
304, 26
               

               
Conread position:
               
238-680
               

               
Cow position:
               
chr17:26631976-26631540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 90
               

               
Conread position:
               
239-684
               

               
Cow position:
               
chr17:28467977-28468399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
16, 29
               

               
Conread position:
               
240-500
               

               
Cow position:
               
chr17:10020957-10020698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
170, 88
               

               
Conread position:
               
241-677
               

               
Cow position:
               
chr17:18146025-18146454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
242-474
               

               
Cow position:
               
chr17:10491367-10491593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
242-640
               

               
Cow position:
               
chr17:31701281-31701663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
377, 53
               

               
Conread position:
               
243-674
               

               
Cow position:
               
chr17:9966188-9965760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
34, 92
               

               
Conread position:
               
244-655
               

               
Cow position:
               
chr17:3467615-3467994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
244-664
               

               
Cow position:
               
chr17:4786650-4786227 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
122, 28
               

               
Conread position:
               
246-648
               

               
Cow position:
               
chr17:31037532-31037141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
115, 35
               

               
Conread position:
               
250-475
               

               
Cow position:
               
chr17:34834368-34834145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
217, 76
               

               
Conread position:
               
250-669
               

               
Cow position:
               
chr17:14003669-14004086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
161, 43
               

               
Conread position:
               
252-515
               

               
Cow position:
               
chr17:14060924-14060666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
176, 18
               

               
Conread position:
               
262-665
               

               
Cow position:
               
chr17:32280529-32280924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
121, 40
               

               
Conread position:
               
265-652
               

               
Cow position:
               
chr17:26233963-26233587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
291, 87
               

               
Conread position:
               
265-678
               

               
Cow position:
               
chr17:25117755-25118150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 25
               

               
Conread position:
               
267-629
               

               
Cow position:
               
chr17:6328977-6329329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
267-649
               

               
Cow position:
               
chr17:40673251-40673610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
268-511
               

               
Cow position:
               
chr17:14762254-14762018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
5, 75
               

               
Conread position:
               
268-591
               

               
Cow position:
               
chr17:33411156-33410828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
142, 133
               

               
Conread position:
               
268-650
               

               
Cow position:
               
chr17:5144302-5143934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
5, 74
               

               
Conread position:
               
271-638
               

               
Cow position:
               
chr17:1113754-1114124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 134
               

               
Conread position:
               
271-648
               

               
Cow position:
               
chr17:40393876-40394255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
63, 23
               

               
Conread position:
               
272-560
               

               
Cow position:
               
chr17:36500675-36500955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
273-652
               

               
Cow position:
               
chr17:27184069-27183702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 20
               

               
Conread position:
               
275-666
               

               
Cow position:
               
chr17:21325205-21325598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
27, 54
               

               
Conread position:
               
277-680
               

               
Cow position:
               
chr17:32348949-32349332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
372, 51
               

               
Conread position:
               
277-684
               

               
Cow position:
               
chr17:20884398-20884802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
374, 51
               

               
Conread position:
               
278-560
               

               
Cow position:
               
chr17:6848681-6848947 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
35, 51
               

               
Conread position:
               
278-586
               

               
Cow position:
               
chr17:33658190-33657889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
146, 14
               

               
Conread position:
               
278-679
               

               
Cow position:
               
chr17:7803295-7802905 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
281-652
               

               
Cow position:
               
chr17:17410168-17410540 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 42
               

               
Conread position:
               
283-617
               

               
Cow position:
               
chr17:25594822-25594489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
78, 29
               

               
Conread position:
               
284-648
               

               
Cow position:
               
chr17:31856545-31856908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
48, 262
               

               
Conread position:
               
287-664
               

               
Cow position:
               
chr17:24559178-24559545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 0
               

               
Conread position:
               
293-479
               

               
Cow position:
               
chr17:1311239-1311422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
51, 56
               

               
Conread position:
               
294-629
               

               
Cow position:
               
chr17:37699464-37699124 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
42, 110
               

               
Conread position:
               
295-654
               

               
Cow position:
               
chr17:1466538-1466174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
186, 13
               

               
Conread position:
               
298-563
               

               
Cow position:
               
chr17:21758250-21757985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
27, 105
               

               
Conread position:
               
298-628
               

               
Cow position:
               
chr17:7136878-7137218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
126, 28
               

               
Conread position:
               
298-629
               

               
Cow position:
               
chr17:11215333-11215016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
165, 30
               

               
Conread position:
               
301-664
               

               
Cow position:
               
chr17:25616158-25616497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
233, 27
               

               
Conread position:
               
301-672
               

               
Cow position:
               
chr17:7692963-7693331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
261, 20
               

               
Conread position:
               
301-683
               

               
Cow position:
               
chr17:14652881-14652513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 27
               

               
Conread position:
               
305-659
               

               
Cow position:
               
chr17:25514220-25513871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
56, 23
               

               
Conread position:
               
306-676
               

               
Cow position:
               
chr17:21743842-21744198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
251, 22
               

               
Conread position:
               
307-573
               

               
Cow position:
               
chr17:23517037-23516777 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
307-579
               

               
Cow position:
               
chr17:27203139-27202876 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
311-545
               

               
Cow position:
               
chr17:23798188-23798418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
312-615
               

               
Cow position:
               
chr17:21489714-21489422 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
231, 16
               

               
Conread position:
               
312-675
               

               
Cow position:
               
chr17:24928384-24928744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
331, 91
               

               
Conread position:
               
315-664
               

               
Cow position:
               
chr17:25342827-25342488 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
324-651
               

               
Cow position:
               
chr17:8598186-8597870 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
324-664
               

               
Cow position:
               
chr17:9056781-9056445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
10, 27
               

               
Conread position:
               
325-570
               

               
Cow position:
               
chr17:15376527-15376753 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
325-640
               

               
Cow position:
               
chr17:5350198-5349895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
41, 52
               

               
Conread position:
               
325-647
               

               
Cow position:
               
chr17:29025988-29026310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 73
               

               
Conread position:
               
325-666
               

               
Cow position:
               
chr17:22057102-22056756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
247, 50
               

               
Conread position:
               
327-641
               

               
Cow position:
               
chr17:36275262-36275565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
246, 16
               

               
Conread position:
               
327-676
               

               
Cow position:
               
chr17:1469299-1469631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
17, 21
               

               
Conread position:
               
328-574
               

               
Cow position:
               
chr17:2275398-2275637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
55, 75
               

               
Conread position:
               
331-674
               

               
Cow position:
               
chr17:11995105-11994759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
136, 72
               

               
Conread position:
               
331-683
               

               
Cow position:
               
chr17:27730466-27730817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
94, 72
               

               
Conread position:
               
335-664
               

               
Cow position:
               
chr17:9824599-9824919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
68, 88
               

               
Conread position:
               
335-671
               

               
Cow position:
               
chr17:21806519-21806189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
315, 50
               

               
Conread position:
               
335-680
               

               
Cow position:
               
chr17:36864561-36864886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
84, 48
               

               
Conread position:
               
338-684
               

               
Cow position:
               
chr17:36814293-36814635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 65
               

               
Conread position:
               
339-576
               

               
Cow position:
               
chr17:4683281-4683518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
85, 64
               

               
Conread position:
               
340-684
               

               
Cow position:
               
chr17:34772435-34772782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
37, 5
               

               
Conread position:
               
346-540
               

               
Cow position:
               
chr17:36093944-36094136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
74, 57
               

               
Conread position:
               
346-652
               

               
Cow position:
               
chr17:44108211-44107929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
20, 52
               

               
Conread position:
               
346-660
               

               
Cow position:
               
chr17:21793289-21792967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
82, 239
               

               
Conread position:
               
347-649
               

               
Cow position:
               
chr17:5288111-5288401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
37, 14
               

               
Conread position:
               
347-669
               

               
Cow position:
               
chr17:25709646-25709973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
62, 56
               

               
Conread position:
               
347-681
               

               
Cow position:
               
chr17:3883805-3883473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
114, 56
               

               
Conread position:
               
348-669
               

               
Cow position:
               
chr17:9770454-9770763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
303, 60
               

               
Conread position:
               
355-674
               

               
Cow position:
               
chr17:18811104-18810800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
359-648
               

               
Cow position:
               
chr17:22051638-22051355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
63, 42
               

               
Conread position:
               
359-652
               

               
Cow position:
               
chr17:3153617-3153328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
203, 36
               

               
Conread position:
               
359-656
               

               
Cow position:
               
chr17:25126306-25126588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
184, 55
               

               
Conread position:
               
359-670
               

               
Cow position:
               
chr17:34791112-34790807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
120, 64
               

               
Conread position:
               
359-676
               

               
Cow position:
               
chr17:21039518-21039820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
360-674
               

               
Cow position:
               
chr17:33067605-33067305 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
361-572
               

               
Cow position:
               
chr17:26730653-26730448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
361-654
               

               
Cow position:
               
chr17:35051563-35051862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
131, 40
               

               
Conread position:
               
361-682
               

               
Cow position:
               
chr17:26513143-26513461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
64, 42
               

               
Conread position:
               
363-573
               

               
Cow position:
               
chr17:26789378-26789585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
57, 90
               

               
Conread position:
               
363-666
               

               
Cow position:
               
chr17:22127879-22128179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
19, 30
               

               
Conread position:
               
363-666
               

               
Cow position:
               
chr17:25466925-25467245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
51, 231
               

               
Conread position:
               
363-669
               

               
Cow position:
               
chr17:16078444-16078143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
271, 38
               

               
Conread position:
               
364-675
               

               
Cow position:
               
chr17:18818529-18818825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
367-649
               

               
Cow position:
               
chr17:29961616-29961891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
51, 203
               

               
Conread position:
               
367-670
               

               
Cow position:
               
chr17:17044371-17044076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
281, 60
               

               
Conread position:
               
372-579
               

               
Cow position:
               
chr17:21922666-21922461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
193, 42
               

               
Conread position:
               
376-666
               

               
Cow position:
               
chr17:9950693-9950401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
86, 27
               

               
Conread position:
               
377-674
               

               
Cow position:
               
chr17:12959076-12959358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
7, 27
               

               
Conread position:
               
382-649
               

               
Cow position:
               
chr17:38869998-38869735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
20, 35
               

               
Conread position:
               
383-625
               

               
Cow position:
               
chr17:40276707-40276954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
18, 193
               

               
Conread position:
               
383-659
               

               
Cow position:
               
chr17:24120114-24119843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
79, 20
               

               
Conread position:
               
383-666
               

               
Cow position:
               
chr17:30728485-30728761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
246, 20
               

               
Conread position:
               
383-667
               

               
Cow position:
               
chr17:32333114-32332836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
51, 20
               

               
Conread position:
               
383-672
               

               
Cow position:
               
chr17:10023032-10023321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
246, 23
               

               
Conread position:
               
387-579
               

               
Cow position:
               
chr17:28814517-28814320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
387-612
               

               
Cow position:
               
chr17:26806881-26807102 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
201, 16
               

               
Conread position:
               
387-651
               

               
Cow position:
               
chr17:40312688-40312938 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
387-652
               

               
Cow position:
               
chr17:5421657-5421921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
32, 195
               

               
Conread position:
               
387-652
               

               
Cow position:
               
chr17:25584221-25584484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
36, 91
               

               
Conread position:
               
387-652
               

               
Cow position:
               
chr17:40384222-40383966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
150, 23
               

               
Conread position:
               
387-666
               

               
Cow position:
               
chr17:28982161-28982432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
40, 29
               

               
Conread position:
               
390-679
               

               
Cow position:
               
chr17:5013092-5012803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
34, 26
               

               
Conread position:
               
392-648
               

               
Cow position:
               
chr17:24168593-24168843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
33, 9
               

               
Conread position:
               
392-648
               

               
Cow position:
               
chr17:26448532-26448779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
111, 25
               

               
Conread position:
               
392-669
               

               
Cow position:
               
chr17:7571087-7571364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
28, 191
               

               
Conread position:
               
393-652
               

               
Cow position:
               
chr17:22189426-22189671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
395-681
               

               
Cow position:
               
chr17:16868279-16868006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
15, 8
               

               
Conread position:
               
398-640
               

               
Cow position:
               
chr17:8986615-8986373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
78, 186
               

               
Conread position:
               
401-683
               

               
Cow position:
               
chr17:8516593-8516315 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
11, 185
               

               
Conread position:
               
402-652
               

               
Cow position:
               
chr17:37857698-37857449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
179, 0
               

               
Conread position:
               
403-655
               

               
Cow position:
               
chr17:19783055-19783299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
23, 13
               

               
Conread position:
               
406-672
               

               
Cow position:
               
chr17:4264223-4264484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
416-652
               

               
Cow position:
               
chr17:20905090-20904867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
119, 0
               

               
Conread position:
               
416-652
               

               
Cow position:
               
chr17:21863665-21863899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
137, 147
               

               
Conread position:
               
416-674
               

               
Cow position:
               
chr17:15354940-15355195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
165, 0
               

               
Conread position:
               
416-680
               

               
Cow position:
               
chr17:25885838-25886097 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
166, 0
               

               
Conread position:
               
417-573
               

               
Cow position:
               
chr17:34571713-34571869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
417-652
               

               
Cow position:
               
chr17:35193810-35193577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
417-652
               

               
Cow position:
               
chr17:40355268-40355501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
417-655
               

               
Cow position:
               
chr17:30169226-30168993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
52, 173
               

               
Conread position:
               
417-656
               

               
Cow position:
               
chr17:23280844-23280613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
417-656
               

               
Cow position:
               
chr17:36179027-36178806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
10, 34
               

               
Conread position:
               
417-664
               

               
Cow position:
               
chr17:6269760-6270019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
417-666
               

               
Cow position:
               
chr17:24613226-24613479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
137, 127
               

               
Conread position:
               
418-622
               

               
Cow position:
               
chr17:1463319-1463118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
418-629
               

               
Cow position:
               
chr17:34037597-34037389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
163, 0
               

               
Conread position:
               
418-668
               

               
Cow position:
               
chr17:24841706-24841953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
163, 0
               

               
Conread position:
               
418-670
               

               
Cow position:
               
chr17:31559580-31559830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
232, 139
               

               
Conread position:
               
421-641
               

               
Cow position:
               
chr17:21788645-21788415 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
421-643
               

               
Cow position:
               
chr17:24582213-24582433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
107, 117
               

               
Conread position:
               
421-646
               

               
Cow position:
               
chr17:24862472-24862689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
144, 0
               

               
Conread position:
               
421-662
               

               
Cow position:
               
chr17:20199326-20199103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
421-666
               

               
Cow position:
               
chr17:21466250-21466003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
421-674
               

               
Cow position:
               
chr17:25587442-25587202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
421-675
               

               
Cow position:
               
chr17:26072747-26072500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
160, 0
               

               
Conread position:
               
421-676
               

               
Cow position:
               
chr17:26637845-26637594 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
52, 107
               

               
Conread position:
               
421-679
               

               
Cow position:
               
chr17:34820921-34821185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
125, 168
               

               
Conread position:
               
421-680
               

               
Cow position:
               
chr17:9509981-9509729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
8, 30
               

               
Conread position:
               
421-682
               

               
Cow position:
               
chr17:5011852-5012111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
55, 31
               

               
Conread position:
               
421-684
               

               
Cow position:
               
chr17:27754171-27754435 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
126, 148
               

               
Conread position:
               
422-640
               

               
Cow position:
               
chr17:6004818-6005028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
422-657
               

               
Cow position:
               
chr17:9935792-9935557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
91, 117
               

               
Conread position:
               
423-649
               

               
Cow position:
               
chr17:36431912-36432136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
423-652
               

               
Cow position:
               
chr17:5780004-5780231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
159, 0
               

               
Conread position:
               
423-664
               

               
Cow position:
               
chr17:4817544-4817782 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
423-668
               

               
Cow position:
               
chr17:43957676-43957916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
423-680
               

               
Cow position:
               
chr17:26119858-26120126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
43, 97
               

               
Conread position:
               
424-658
               

               
Cow position:
               
chr17:22076186-22076419 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
39, 101
               

               
Conread position:
               
424-669
               

               
Cow position:
               
chr17:36712697-36712458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
425-650
               

               
Cow position:
               
chr17:32143106-32143327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
35, 25
               

               
Conread position:
               
425-653
               

               
Cow position:
               
chr17:25473262-25473040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
426-655
               

               
Cow position:
               
chr17:21014999-21015230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
40, 124
               

               
Conread position:
               
427-670
               

               
Cow position:
               
chr17:28465443-28465686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
8, 155
               

               
Conread position:
               
428-669
               

               
Cow position:
               
chr17:12249208-12248978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
35, 13
               

               
Conread position:
               
431-578
               

               
Cow position:
               
chr17:37430481-37430334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
431-643
               

               
Cow position:
               
chr17:21777743-21777959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
32, 90
               

               
Conread position:
               
431-656
               

               
Cow position:
               
chr17:4699696-4699467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
35, 119
               

               
Conread position:
               
431-656
               

               
Cow position:
               
chr17:24877128-24877350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
151, 0
               

               
Conread position:
               
431-678
               

               
Cow position:
               
chr17:45135881-45135647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
219, 56
               

               
Conread position:
               
431-679
               

               
Cow position:
               
chr17:15303952-15303705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
237, 151
               

               
Conread position:
               
431-684
               

               
Cow position:
               
chr17:20929265-20929517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
228, 156
               

               
Conread position:
               
432-663
               

               
Cow position:
               
chr17:5039022-5038804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
42, 0
               

               
Conread position:
               
433-665
               

               
Cow position:
               
chr17:26757422-26757190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
122, 143
               

               
Conread position:
               
434-629
               

               
Cow position:
               
chr17:42361532-42361726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
129, 148
               

               
Conread position:
               
434-652
               

               
Cow position:
               
chr17:13414341-13414125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
9e-32
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
435-652
               

               
Cow position:
               
chr17:27292429-27292214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
146, 0
               

               
Conread position:
               
440-579
               

               
Cow position:
               
chr17:1876010-1875874 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
140
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
440-642
               

               
Cow position:
               
chr17:10414531-10414723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
441-656
               

               
Cow position:
               
chr17:14024597-14024384 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
441-666
               

               
Cow position:
               
chr17:12346805-12346581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
168, 134
               

               
Conread position:
               
441-684
               

               
Cow position:
               
chr17:20306359-20306609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
7, 54
               

               
Conread position:
               
442-571
               

               
Cow position:
               
chr17:7675120-7674992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
444-665
               

               
Cow position:
               
chr17:41616772-41616992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
444-678
               

               
Cow position:
               
chr17:21718960-21718732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
445-682
               

               
Cow position:
               
chr17:25139301-25139546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
448-654
               

               
Cow position:
               
chr17:11921126-11920920 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
13, 135
               

               
Conread position:
               
449-649
               

               
Cow position:
               
chr17:37552985-37552787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
450-641
               

               
Cow position:
               
chr17:31754732-31754542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
186, 44
               

               
Conread position:
               
450-643
               

               
Cow position:
               
chr17:13291130-13290942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
450-652
               

               
Cow position:
               
chr17:26836724-26836525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
450-652
               

               
Cow position:
               
chr17:36523004-36522804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
450-652
               

               
Cow position:
               
chr17:38125149-38124949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
450-652
               

               
Cow position:
               
chr17:38536593-38536399 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
450-657
               

               
Cow position:
               
chr17:39963920-39964123 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
450-665
               

               
Cow position:
               
chr17:15883714-15883927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
107, 132
               

               
Conread position:
               
450-672
               

               
Cow position:
               
chr17:32220843-32220621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
70, 103
               

               
Conread position:
               
450-680
               

               
Cow position:
               
chr17:25702642-25702871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
25, 133
               

               
Conread position:
               
450-682
               

               
Cow position:
               
chr17:5344660-5344889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
172, 0
               

               
Conread position:
               
451-670
               

               
Cow position:
               
chr17:26225071-26225287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
198, 116
               

               
Conread position:
               
452-680
               

               
Cow position:
               
chr17:3387755-3387987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
30, 98
               

               
Conread position:
               
452-683
               

               
Cow position:
               
chr17:7733073-7732845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
213, 114
               

               
Conread position:
               
453-659
               

               
Cow position:
               
chr17:11056115-11055919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
8, 68
               

               
Conread position:
               
453-683
               

               
Cow position:
               
chr17:16438675-16438453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
184, 0
               

               
Conread position:
               
454-652
               

               
Cow position:
               
chr17:20913157-20913348 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
7, 13
               

               
Conread position:
               
454-652
               

               
Cow position:
               
chr17:28795936-28795740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
454-656
               

               
Cow position:
               
chr17:44798892-44798697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
105, 85
               

               
Conread position:
               
454-672
               

               
Cow position:
               
chr17:19898937-19899159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
50, 208
               

               
Conread position:
               
454-681
               

               
Cow position:
               
chr17:25474679-25474903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
100, 90
               

               
Conread position:
               
454-684
               

               
Cow position:
               
chr17:3962430-3962656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
16, 112
               

               
Conread position:
               
455-652
               

               
Cow position:
               
chr17:4723536-4723339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
33, 86
               

               
Conread position:
               
455-677
               

               
Cow position:
               
chr17:6786984-6787205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
96, 128
               

               
Conread position:
               
456-662
               

               
Cow position:
               
chr17:10016328-10016527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
457-652
               

               
Cow position:
               
chr17:6268830-6268637 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
458-656
               

               
Cow position:
               
chr17:9899954-9900148 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
193, 44
               

               
Conread position:
               
459-651
               

               
Cow position:
               
chr17:9078169-9077974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
129, 105
               

               
Conread position:
               
459-652
               

               
Cow position:
               
chr17:43323493-43323302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
459-664
               

               
Cow position:
               
chr17:20359164-20359364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
101, 123
               

               
Conread position:
               
459-672
               

               
Cow position:
               
chr17:30900363-30900574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
54, 10
               

               
Conread position:
               
462-665
               

               
Cow position:
               
chr17:15154835-15154630 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
462-676
               

               
Cow position:
               
chr17:30494101-30493896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
462-677
               

               
Cow position:
               
chr17:5179316-5179527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
462-679
               

               
Cow position:
               
chr17:6979122-6978908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
188, 119
               

               
Conread position:
               
462-679
               

               
Cow position:
               
chr17:36574068-36573852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
145, 113
               

               
Conread position:
               
462-683
               

               
Cow position:
               
chr17:5762100-5761878 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
8e-31
               

               
Alignm gaps (pig, cow):
               
50, 20
               

               
Conread position:
               
463-671
               

               
Cow position:
               
chr17:6761792-6761596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
463-684
               

               
Cow position:
               
chr17:33140438-33140657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
465-652
               

               
Cow position:
               
chr17:21181509-21181694 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
465-656
               

               
Cow position:
               
chr17:1081262-1081452 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
82, 117
               

               
Conread position:
               
465-663
               

               
Cow position:
               
chr17:7037566-7037369 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
177, 82
               

               
Conread position:
               
465-666
               

               
Cow position:
               
chr17:13976653-13976455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
467-655
               

               
Cow position:
               
chr17:10222150-10221964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
471-662
               

               
Cow position:
               
chr17:26183408-26183598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
178, 97
               

               
Conread position:
               
471-675
               

               
Cow position:
               
chr17:10454522-10454320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
82, 76
               

               
Conread position:
               
471-675
               

               
Cow position:
               
chr17:36468127-36467925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
88, 112
               

               
Conread position:
               
471-683
               

               
Cow position:
               
chr17:21236586-21236791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
474-684
               

               
Cow position:
               
chr17:31231894-31231685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
41, 103
               

               
Conread position:
               
482-663
               

               
Cow position:
               
chr17:10630908-10630730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
483-652
               

               
Cow position:
               
chr17:12252144-12251977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
483-657
               

               
Cow position:
               
chr17:30108515-30108675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
483-675
               

               
Cow position:
               
chr17:11269699-11269510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
170, 46
               

               
Conread position:
               
483-681
               

               
Cow position:
               
chr17:40277884-40277686 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
166, 45
               

               
Conread position:
               
484-654
               

               
Cow position:
               
chr17:6767184-6767015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
147, 97
               

               
Conread position:
               
484-664
               

               
Cow position:
               
chr17:37973990-37973806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
73, 102
               

               
Conread position:
               
484-666
               

               
Cow position:
               
chr17:27565636-27565818 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
25, 91
               

               
Conread position:
               
484-666
               

               
Cow position:
               
chr17:32978856-32978683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
484-673
               

               
Cow position:
               
chr17:18708534-18708357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
484-684
               

               
Cow position:
               
chr17:36943446-36943634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
488-666
               

               
Cow position:
               
chr17:34187957-34188133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
491-652
               

               
Cow position:
               
chr17:26849686-26849528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
491-672
               

               
Cow position:
               
chr17:35921973-35922152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
491-674
               

               
Cow position:
               
chr17:27650573-27650756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
95, 42
               

               
Conread position:
               
491-683
               

               
Cow position:
               
chr17:10477886-10478077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
159, 95
               

               
Conread position:
               
493-673
               

               
Cow position:
               
chr17:14668588-14668763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
493-680
               

               
Cow position:
               
chr17:34343182-34343003 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
498-673
               

               
Cow position:
               
chr17:10037498-10037671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
501-683
               

               
Cow position:
               
chr17:18673946-18673765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
150, 81
               

               
Conread position:
               
507-680
               

               
Cow position:
               
chr17:7276377-7276548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
53, 40
               

               
Conread position:
               
508-644
               

               
Cow position:
               
chr17:22773026-22772890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
508-659
               

               
Cow position:
               
chr17:30156320-30156172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
144, 73
               

               
Conread position:
               
508-681
               

               
Cow position:
               
chr17:35935260-35935432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
140, 69
               

               
Conread position:
               
514-669
               

               
Cow position:
               
chr17:39253540-39253388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
519-666
               

               
Cow position:
               
chr17:10461112-10461261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
526-666
               

               
Cow position:
               
chr17:4271244-4271103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
37, 51
               
Show alignments to all cow chromosomes.