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Cow genome map

           
Conread name:
           
Ss1.1-pigcb_1823.5
        

               
Conread position:
               
154-425
               

               
Cow position:
               
chr25:36026720-36026985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
177-457
               

               
Cow position:
               
chr25:8918542-8918269 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
74, 151
               

               
Conread position:
               
177-504
               

               
Cow position:
               
chr25:2194686-2194985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
180-651
               

               
Cow position:
               
chr25:9990353-9989906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
8, 115
               

               
Conread position:
               
180-652
               

               
Cow position:
               
chr25:10643573-10643119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 163
               

               
Conread position:
               
180-665
               

               
Cow position:
               
chr25:35347644-35348117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
334, 30
               

               
Conread position:
               
182-504
               

               
Cow position:
               
chr25:32191412-32191714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
47, 0
               

               
Conread position:
               
182-515
               

               
Cow position:
               
chr25:5837225-5836892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
268, 143
               

               
Conread position:
               
182-652
               

               
Cow position:
               
chr25:22314942-22315401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
228, 99
               

               
Conread position:
               
183-452
               

               
Cow position:
               
chr25:7329285-7329551 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
8, 143
               

               
Conread position:
               
184-334
               

               
Cow position:
               
chr25:17475782-17475628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
6, 0
               

               
Conread position:
               
185-458
               

               
Cow position:
               
chr25:4002539-4002810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
11, 81
               

               
Conread position:
               
185-578
               

               
Cow position:
               
chr25:16319389-16319014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
11, 102
               

               
Conread position:
               
186-629
               

               
Cow position:
               
chr25:22369139-22369560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
189-499
               

               
Cow position:
               
chr25:11666405-11666697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
236, 10
               

               
Conread position:
               
191-451
               

               
Cow position:
               
chr25:7800886-7801142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
216, 135
               

               
Conread position:
               
191-451
               

               
Cow position:
               
chr25:16001771-16001524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
19, 87
               

               
Conread position:
               
191-521
               

               
Cow position:
               
chr25:11131335-11131655 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
223, 18
               

               
Conread position:
               
192-651
               

               
Cow position:
               
chr25:21245855-21245397 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 20
               

               
Conread position:
               
192-652
               

               
Cow position:
               
chr25:6803315-6803745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
192-682
               

               
Cow position:
               
chr25:33959509-33959025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
152, 47
               

               
Conread position:
               
193-475
               

               
Cow position:
               
chr25:24008425-24008162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
194-479
               

               
Cow position:
               
chr25:1735563-1735291 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
194-562
               

               
Cow position:
               
chr25:21895134-21894772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 83
               

               
Conread position:
               
194-578
               

               
Cow position:
               
chr25:18988129-18988511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 130
               

               
Conread position:
               
194-620
               

               
Cow position:
               
chr25:41132602-41132201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
8.00001e-42
               

               
Alignm gaps (pig, cow):
               
296, 94
               

               
Conread position:
               
194-649
               

               
Cow position:
               
chr25:11139399-11139835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
369, 59
               

               
Conread position:
               
194-652
               

               
Cow position:
               
chr25:33664143-33663712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
142, 97
               

               
Conread position:
               
194-666
               

               
Cow position:
               
chr25:6470467-6469991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 109
               

               
Conread position:
               
194-680
               

               
Cow position:
               
chr25:20069473-20069939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
331, 132
               

               
Conread position:
               
195-570
               

               
Cow position:
               
chr25:6226795-6227155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
195-579
               

               
Cow position:
               
chr25:23917597-23917969 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
58, 6
               

               
Conread position:
               
195-640
               

               
Cow position:
               
chr25:17566341-17566776 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
337, 85
               

               
Conread position:
               
196-478
               

               
Cow position:
               
chr25:36779251-36779529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
218, 16
               

               
Conread position:
               
196-652
               

               
Cow position:
               
chr25:23324609-23324176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
197-322
               

               
Cow position:
               
chr25:12174749-12174624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
197-324
               

               
Cow position:
               
chr25:9842756-9842883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
129
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
7, 48
               

               
Conread position:
               
197-340
               

               
Cow position:
               
chr25:13720782-13720645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
144
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
51, 0
               

               
Conread position:
               
197-341
               

               
Cow position:
               
chr25:13566601-13566743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
145
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
197-366
               

               
Cow position:
               
chr25:40407713-40407552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
197-373
               

               
Cow position:
               
chr25:17712290-17712462 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
141, 80
               

               
Conread position:
               
197-378
               

               
Cow position:
               
chr25:18448593-18448770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
183
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
56, 68
               

               
Conread position:
               
197-419
               

               
Cow position:
               
chr25:6424829-6424617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
197-419
               

               
Cow position:
               
chr25:10365996-10365781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
197-425
               

               
Cow position:
               
chr25:12204226-12204447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
197-428
               

               
Cow position:
               
chr25:1096333-1096549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
204, 79
               

               
Conread position:
               
197-439
               

               
Cow position:
               
chr25:10012293-10012055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
135, 95
               

               
Conread position:
               
197-444
               

               
Cow position:
               
chr25:8347265-8347506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
128, 92
               

               
Conread position:
               
197-448
               

               
Cow position:
               
chr25:15694739-15694980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
7, 75
               

               
Conread position:
               
197-455
               

               
Cow position:
               
chr25:15412014-15411763 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
197-455
               

               
Cow position:
               
chr25:31732980-31732729 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
197-460
               

               
Cow position:
               
chr25:5514763-5515024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
183, 17
               

               
Conread position:
               
197-460
               

               
Cow position:
               
chr25:9961422-9961163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
55, 144
               

               
Conread position:
               
197-460
               

               
Cow position:
               
chr25:10137854-10138104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
223, 72
               

               
Conread position:
               
197-460
               

               
Cow position:
               
chr25:12824258-12824007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
197-460
               

               
Cow position:
               
chr25:26058341-26058595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
74, 0
               

               
Conread position:
               
197-469
               

               
Cow position:
               
chr25:20211330-20211061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
75, 131
               

               
Conread position:
               
197-475
               

               
Cow position:
               
chr25:9023401-9023658 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
205, 31
               

               
Conread position:
               
197-475
               

               
Cow position:
               
chr25:15319677-15319945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
227, 15
               

               
Conread position:
               
197-495
               

               
Cow position:
               
chr25:5341407-5341699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
62, 13
               

               
Conread position:
               
197-504
               

               
Cow position:
               
chr25:24405980-24405679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
57, 70
               

               
Conread position:
               
197-504
               

               
Cow position:
               
chr25:33691310-33691612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
156, 16
               

               
Conread position:
               
197-532
               

               
Cow position:
               
chr25:6886221-6885889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
336
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
197-539
               

               
Cow position:
               
chr25:5539178-5539511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
197-539
               

               
Cow position:
               
chr25:23351152-23351486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
197-543
               

               
Cow position:
               
chr25:5572042-5571707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
205, 108
               

               
Conread position:
               
197-544
               

               
Cow position:
               
chr25:37594170-37594501 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
342, 76
               

               
Conread position:
               
197-545
               

               
Cow position:
               
chr25:2046798-2046465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
12, 78
               

               
Conread position:
               
197-545
               

               
Cow position:
               
chr25:23407086-23406744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
206, 130
               

               
Conread position:
               
197-551
               

               
Cow position:
               
chr25:11437046-11436706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
96, 109
               

               
Conread position:
               
197-560
               

               
Cow position:
               
chr25:25051628-25051267 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
216, 104
               

               
Conread position:
               
197-560
               

               
Cow position:
               
chr25:41107514-41107863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
197-566
               

               
Cow position:
               
chr25:21191243-21191604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
226, 128
               

               
Conread position:
               
197-569
               

               
Cow position:
               
chr25:27531511-27531152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
147, 80
               

               
Conread position:
               
197-570
               

               
Cow position:
               
chr25:11662063-11661696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
352, 15
               

               
Conread position:
               
197-570
               

               
Cow position:
               
chr25:18564251-18564606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
197-571
               

               
Cow position:
               
chr25:2499018-2499389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
182, 105
               

               
Conread position:
               
197-571
               

               
Cow position:
               
chr25:3145602-3145964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
36, 0
               

               
Conread position:
               
197-573
               

               
Cow position:
               
chr25:26654663-26655030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
259, 15
               

               
Conread position:
               
197-574
               

               
Cow position:
               
chr25:21950882-21951254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
252, 84
               

               
Conread position:
               
197-576
               

               
Cow position:
               
chr25:13708773-13709144 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
151, 71
               

               
Conread position:
               
197-576
               

               
Cow position:
               
chr25:36761862-36762229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
76, 58
               

               
Conread position:
               
197-579
               

               
Cow position:
               
chr25:14196611-14196990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
8, 69
               

               
Conread position:
               
197-579
               

               
Cow position:
               
chr25:22531043-22531410 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2.94273e-44
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
197-579
               

               
Cow position:
               
chr25:26238627-26238992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
162, 85
               

               
Conread position:
               
197-579
               

               
Cow position:
               
chr25:28188192-28187816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
197-580
               

               
Cow position:
               
chr25:7581671-7581298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
315, 15
               

               
Conread position:
               
197-580
               

               
Cow position:
               
chr25:31230467-31230118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
197-619
               

               
Cow position:
               
chr25:16866988-16867409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
177, 17
               

               
Conread position:
               
197-622
               

               
Cow position:
               
chr25:16064653-16065049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
197-622
               

               
Cow position:
               
chr25:33256125-33256532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
317, 15
               

               
Conread position:
               
197-626
               

               
Cow position:
               
chr25:6237879-6238296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
69, 130
               

               
Conread position:
               
197-627
               

               
Cow position:
               
chr25:12293995-12293572 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 156
               

               
Conread position:
               
197-629
               

               
Cow position:
               
chr25:18075425-18075840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
272, 27
               

               
Conread position:
               
197-629
               

               
Cow position:
               
chr25:22203934-22203523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
85, 125
               

               
Conread position:
               
197-640
               

               
Cow position:
               
chr25:20402963-20402524 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
150, 15
               

               
Conread position:
               
197-640
               

               
Cow position:
               
chr25:36535676-36535233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
224, 12
               

               
Conread position:
               
197-648
               

               
Cow position:
               
chr25:9269129-9269533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
197-648
               

               
Cow position:
               
chr25:14512872-14513299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
191, 15
               

               
Conread position:
               
197-648
               

               
Cow position:
               
chr25:26087271-26087711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 131
               

               
Conread position:
               
197-648
               

               
Cow position:
               
chr25:36081630-36082061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
444, 15
               

               
Conread position:
               
197-650
               

               
Cow position:
               
chr25:17658371-17658807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 11
               

               
Conread position:
               
197-651
               

               
Cow position:
               
chr25:22297261-22296817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
215, 67
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr25:1837996-1838440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
275, 27
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr25:7306054-7306487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
270, 128
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr25:13840362-13839897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
114, 15
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr25:20060275-20059850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
49, 27
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr25:23053312-23053760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
365, 115
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr25:24669674-24669255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr25:26225283-26224839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
132, 15
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr25:26700796-26701217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr25:33550262-33550709 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
301, 23
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr25:36746689-36746251 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr25:38135503-38135950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
7, 58
               

               
Conread position:
               
197-655
               

               
Cow position:
               
chr25:19679098-19679552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 16
               

               
Conread position:
               
197-659
               

               
Cow position:
               
chr25:21193187-21192737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
147, 13
               

               
Conread position:
               
197-664
               

               
Cow position:
               
chr25:16922038-16921583 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
355, 128
               

               
Conread position:
               
197-665
               

               
Cow position:
               
chr25:5834497-5834033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
269, 74
               

               
Conread position:
               
197-665
               

               
Cow position:
               
chr25:11585274-11585741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
368, 131
               

               
Conread position:
               
197-666
               

               
Cow position:
               
chr25:33457462-33457936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
124, 387
               

               
Conread position:
               
197-667
               

               
Cow position:
               
chr25:5847050-5846591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 23
               

               
Conread position:
               
197-673
               

               
Cow position:
               
chr25:12261138-12260668 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 35
               

               
Conread position:
               
197-676
               

               
Cow position:
               
chr25:27821167-27821652 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
500
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
183, 129
               

               
Conread position:
               
197-677
               

               
Cow position:
               
chr25:6474342-6473853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 15
               

               
Conread position:
               
197-681
               

               
Cow position:
               
chr25:6464273-6463801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
189, 79
               

               
Conread position:
               
197-682
               

               
Cow position:
               
chr25:18294558-18294087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 80
               

               
Conread position:
               
197-682
               

               
Cow position:
               
chr25:30319693-30319222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 77
               

               
Conread position:
               
197-684
               

               
Cow position:
               
chr25:18487430-18487906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
94, 30
               

               
Conread position:
               
198-321
               

               
Cow position:
               
chr25:16691273-16691396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
124
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
198-353
               

               
Cow position:
               
chr25:5271344-5271499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
198-363
               

               
Cow position:
               
chr25:21209191-21209029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
146, 127
               

               
Conread position:
               
198-368
               

               
Cow position:
               
chr25:27621841-27622009 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
198-397
               

               
Cow position:
               
chr25:20460879-20461077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
12, 128
               

               
Conread position:
               
198-498
               

               
Cow position:
               
chr25:9957275-9956990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
198-512
               

               
Cow position:
               
chr25:25754239-25753934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
252, 12
               

               
Conread position:
               
198-546
               

               
Cow position:
               
chr25:21541304-21541650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
141, 62
               

               
Conread position:
               
198-574
               

               
Cow position:
               
chr25:13569410-13569052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
344, 94
               

               
Conread position:
               
198-575
               

               
Cow position:
               
chr25:4547963-4547595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
198-634
               

               
Cow position:
               
chr25:40321535-40321117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
217, 14
               

               
Conread position:
               
198-652
               

               
Cow position:
               
chr25:7216585-7217014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
74, 84
               

               
Conread position:
               
198-652
               

               
Cow position:
               
chr25:12750406-12749954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
101, 195
               

               
Conread position:
               
199-318
               

               
Cow position:
               
chr25:33687138-33687018 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
121
               

               
Alignm identity:
               
96
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
199-389
               

               
Cow position:
               
chr25:6003233-6003049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
181, 122
               

               
Conread position:
               
199-469
               

               
Cow position:
               
chr25:5792048-5791781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
148, 13
               

               
Conread position:
               
199-552
               

               
Cow position:
               
chr25:36037022-36036677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
215, 81
               

               
Conread position:
               
199-675
               

               
Cow position:
               
chr25:13099722-13099255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
354, 126
               

               
Conread position:
               
199-681
               

               
Cow position:
               
chr25:10407660-10407185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
271, 127
               

               
Conread position:
               
200-419
               

               
Cow position:
               
chr25:24727028-24726810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
210, 126
               

               
Conread position:
               
200-545
               

               
Cow position:
               
chr25:15377092-15377421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
219, 61
               

               
Conread position:
               
200-565
               

               
Cow position:
               
chr25:12840958-12840603 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
136, 12
               

               
Conread position:
               
200-578
               

               
Cow position:
               
chr25:15254572-15254222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
200-625
               

               
Cow position:
               
chr25:788028-788427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
200-640
               

               
Cow position:
               
chr25:6948299-6947866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
319, 127
               

               
Conread position:
               
200-652
               

               
Cow position:
               
chr25:21289099-21289546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
443, 202
               

               
Conread position:
               
200-666
               

               
Cow position:
               
chr25:14791511-14791966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
219, 71
               

               
Conread position:
               
201-663
               

               
Cow position:
               
chr25:7641693-7641247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
211, 16
               

               
Conread position:
               
202-653
               

               
Cow position:
               
chr25:19129615-19130052 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
186, 22
               

               
Conread position:
               
202-678
               

               
Cow position:
               
chr25:20348620-20349100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
192, 10
               

               
Conread position:
               
203-425
               

               
Cow position:
               
chr25:15286778-15286565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
216, 83
               

               
Conread position:
               
203-553
               

               
Cow position:
               
chr25:12778770-12778438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
141, 122
               

               
Conread position:
               
203-574
               

               
Cow position:
               
chr25:20023631-20023262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
198, 121
               

               
Conread position:
               
203-671
               

               
Cow position:
               
chr25:12097604-12098054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 106
               

               
Conread position:
               
203-675
               

               
Cow position:
               
chr25:21458351-21458834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
343, 122
               

               
Conread position:
               
203-680
               

               
Cow position:
               
chr25:24572836-24573283 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
158, 73
               

               
Conread position:
               
204-465
               

               
Cow position:
               
chr25:35340095-35340345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
205, 65
               

               
Conread position:
               
204-486
               

               
Cow position:
               
chr25:25827225-25827507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
204-566
               

               
Cow position:
               
chr25:61421-61766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
127, 9
               

               
Conread position:
               
204-566
               

               
Cow position:
               
chr25:38981875-38982209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
204-643
               

               
Cow position:
               
chr25:10504572-10504147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
367, 65
               

               
Conread position:
               
204-655
               

               
Cow position:
               
chr25:8120539-8120981 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
114, 125
               

               
Conread position:
               
204-665
               

               
Cow position:
               
chr25:30279444-30278986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
139, 107
               

               
Conread position:
               
204-681
               

               
Cow position:
               
chr25:13380853-13380375 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
184, 123
               

               
Conread position:
               
206-534
               

               
Cow position:
               
chr25:12817137-12817449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
206-629
               

               
Cow position:
               
chr25:20007912-20008308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
425
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
8.99634e-43
               

               
Alignm gaps (pig, cow):
               
266, 49
               

               
Conread position:
               
206-664
               

               
Cow position:
               
chr25:4522054-4521633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
49, 0
               

               
Conread position:
               
206-667
               

               
Cow position:
               
chr25:26338210-26338673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
90, 122
               

               
Conread position:
               
207-667
               

               
Cow position:
               
chr25:29826176-29826633 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
22, 122
               

               
Conread position:
               
212-464
               

               
Cow position:
               
chr25:35625403-35625170 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
212-471
               

               
Cow position:
               
chr25:36033207-36033459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
212-473
               

               
Cow position:
               
chr25:9396221-9396468 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
212-512
               

               
Cow position:
               
chr25:38425136-38425423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
212-533
               

               
Cow position:
               
chr25:6961379-6961070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
167, 43
               

               
Conread position:
               
213-460
               

               
Cow position:
               
chr25:23389510-23389268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
213-578
               

               
Cow position:
               
chr25:34169726-34170074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
209, 68
               

               
Conread position:
               
213-663
               

               
Cow position:
               
chr25:1762879-1763292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
214-330
               

               
Cow position:
               
chr25:36557459-36557575 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
92
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
214-491
               

               
Cow position:
               
chr25:12239375-12239106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
41, 53
               

               
Conread position:
               
214-573
               

               
Cow position:
               
chr25:10218278-10217926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 49
               

               
Conread position:
               
214-683
               

               
Cow position:
               
chr25:8225870-8226334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
206, 114
               

               
Conread position:
               
219-677
               

               
Cow position:
               
chr25:17914558-17915004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
221-650
               

               
Cow position:
               
chr25:7007696-7008115 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
201, 43
               

               
Conread position:
               
222-652
               

               
Cow position:
               
chr25:12899536-12899963 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
210, 14
               

               
Conread position:
               
224-672
               

               
Cow position:
               
chr25:27868587-27869030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
236, 49
               

               
Conread position:
               
227-652
               

               
Cow position:
               
chr25:19478474-19478887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
298, 101
               

               
Conread position:
               
231-553
               

               
Cow position:
               
chr25:26090025-26089710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
8, 61
               

               
Conread position:
               
233-475
               

               
Cow position:
               
chr25:26270142-26269912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
176, 44
               

               
Conread position:
               
234-669
               

               
Cow position:
               
chr25:40905036-40904614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
91, 39
               

               
Conread position:
               
235-544
               

               
Cow position:
               
chr25:16714480-16714175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
101, 58
               

               
Conread position:
               
235-652
               

               
Cow position:
               
chr25:13272363-13272766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
90, 0
               

               
Conread position:
               
235-679
               

               
Cow position:
               
chr25:22178715-22179133 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
286
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
18, 0
               

               
Conread position:
               
236-627
               

               
Cow position:
               
chr25:8157715-8157337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
8e-32
               

               
Alignm gaps (pig, cow):
               
146, 74
               

               
Conread position:
               
237-565
               

               
Cow position:
               
chr25:20133520-20133200 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
5, 44
               

               
Conread position:
               
237-629
               

               
Cow position:
               
chr25:6977774-6978157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
218, 89
               

               
Conread position:
               
237-656
               

               
Cow position:
               
chr25:17704545-17704940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
237-658
               

               
Cow position:
               
chr25:13446124-13445711 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
66, 76
               

               
Conread position:
               
239-680
               

               
Cow position:
               
chr25:7750248-7750671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
53, 88
               

               
Conread position:
               
245-609
               

               
Cow position:
               
chr25:25861556-25861190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
157, 77
               

               
Conread position:
               
248-458
               

               
Cow position:
               
chr25:3982851-3983048 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
248-576
               

               
Cow position:
               
chr25:13672195-13672529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
337
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
253, 80
               

               
Conread position:
               
249-629
               

               
Cow position:
               
chr25:17342257-17342635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 153
               

               
Conread position:
               
249-652
               

               
Cow position:
               
chr25:26133846-26134243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
173, 42
               

               
Conread position:
               
254-652
               

               
Cow position:
               
chr25:37562520-37562898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
262-652
               

               
Cow position:
               
chr25:18894902-18894514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
405
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
130, 75
               

               
Conread position:
               
265-487
               

               
Cow position:
               
chr25:16555582-16555803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
104, 87
               

               
Conread position:
               
265-571
               

               
Cow position:
               
chr25:18905705-18906006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
265-579
               

               
Cow position:
               
chr25:36017363-36017662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
152, 24
               

               
Conread position:
               
265-684
               

               
Cow position:
               
chr25:11325318-11324895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
175, 62
               

               
Conread position:
               
266-530
               

               
Cow position:
               
chr25:4681058-4681310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
146, 59
               

               
Conread position:
               
267-684
               

               
Cow position:
               
chr25:20047328-20047743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
172, 100
               

               
Conread position:
               
268-586
               

               
Cow position:
               
chr25:15440957-15440646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
106, 60
               

               
Conread position:
               
268-648
               

               
Cow position:
               
chr25:11315733-11316095 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
162, 73
               

               
Conread position:
               
268-676
               

               
Cow position:
               
chr25:12755669-12755270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
412
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
142, 60
               

               
Conread position:
               
269-680
               

               
Cow position:
               
chr25:27532849-27532448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
68, 72
               

               
Conread position:
               
273-652
               

               
Cow position:
               
chr25:26136996-26136623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
35, 56
               

               
Conread position:
               
273-679
               

               
Cow position:
               
chr25:5920766-5921165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
71, 75
               

               
Conread position:
               
274-664
               

               
Cow position:
               
chr25:15410082-15409713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
274-679
               

               
Cow position:
               
chr25:22346600-22347008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
415
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
38, 56
               

               
Conread position:
               
275-652
               

               
Cow position:
               
chr25:8485667-8485286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
7, 130
               

               
Conread position:
               
276-560
               

               
Cow position:
               
chr25:22751177-22750897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
108, 20
               

               
Conread position:
               
276-658
               

               
Cow position:
               
chr25:24651617-24651254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
277-667
               

               
Cow position:
               
chr25:30462467-30462108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
376, 51
               

               
Conread position:
               
278-643
               

               
Cow position:
               
chr25:7381007-7380650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
38, 63
               

               
Conread position:
               
280-573
               

               
Cow position:
               
chr25:33978380-33978099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
281-589
               

               
Cow position:
               
chr25:17991747-17991450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
144, 95
               

               
Conread position:
               
281-658
               

               
Cow position:
               
chr25:21893174-21893537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
282-664
               

               
Cow position:
               
chr25:6996619-6996995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
367, 121
               

               
Conread position:
               
282-666
               

               
Cow position:
               
chr25:26679065-26679438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
46, 0
               

               
Conread position:
               
283-652
               

               
Cow position:
               
chr25:9002513-9002866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
294-579
               

               
Cow position:
               
chr25:30618915-30619192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
295-530
               

               
Cow position:
               
chr25:19317109-19317345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
119, 20
               

               
Conread position:
               
295-629
               

               
Cow position:
               
chr25:36872206-36872537 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
41, 15
               

               
Conread position:
               
295-683
               

               
Cow position:
               
chr25:36020255-36020639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
167, 33
               

               
Conread position:
               
297-672
               

               
Cow position:
               
chr25:7673132-7673520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
31, 135
               

               
Conread position:
               
298-652
               

               
Cow position:
               
chr25:21668099-21668445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
119, 30
               

               
Conread position:
               
301-573
               

               
Cow position:
               
chr25:5474370-5474107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-33
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
302-467
               

               
Cow position:
               
chr25:12997449-12997612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
305-677
               

               
Cow position:
               
chr25:11066288-11065911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
288, 276
               

               
Conread position:
               
306-652
               

               
Cow position:
               
chr25:20664436-20664082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
42, 285
               

               
Conread position:
               
312-668
               

               
Cow position:
               
chr25:448300-447948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
154, 16
               

               
Conread position:
               
316-627
               

               
Cow position:
               
chr25:15634605-15634294 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
68, 267
               

               
Conread position:
               
316-659
               

               
Cow position:
               
chr25:22756480-22756815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
317-666
               

               
Cow position:
               
chr25:17119613-17119955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 79
               

               
Conread position:
               
317-675
               

               
Cow position:
               
chr25:18202054-18201707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
107, 11
               

               
Conread position:
               
319-681
               

               
Cow position:
               
chr25:7011099-7010743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
106, 27
               

               
Conread position:
               
322-683
               

               
Cow position:
               
chr25:7035427-7035783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
10, 82
               

               
Conread position:
               
324-652
               

               
Cow position:
               
chr25:20157421-20157096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
325-669
               

               
Cow position:
               
chr25:27801164-27801494 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
328, 89
               

               
Conread position:
               
325-672
               

               
Cow position:
               
chr25:33686804-33686466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
327-655
               

               
Cow position:
               
chr25:34242218-34241886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
238, 73
               

               
Conread position:
               
327-670
               

               
Cow position:
               
chr25:22730714-22731043 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
157, 26
               

               
Conread position:
               
328-646
               

               
Cow position:
               
chr25:19364182-19363869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
4e-36
               

               
Alignm gaps (pig, cow):
               
10, 95
               

               
Conread position:
               
330-652
               

               
Cow position:
               
chr25:14152070-14152385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
224, 70
               

               
Conread position:
               
331-656
               

               
Cow position:
               
chr25:7816867-7817187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
53, 21
               

               
Conread position:
               
335-652
               

               
Cow position:
               
chr25:30816773-30817089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 88
               

               
Conread position:
               
338-655
               

               
Cow position:
               
chr25:1824205-1823891 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
6e-40
               

               
Alignm gaps (pig, cow):
               
234, 40
               

               
Conread position:
               
338-680
               

               
Cow position:
               
chr25:22317571-22317911 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
310, 63
               

               
Conread position:
               
345-579
               

               
Cow position:
               
chr25:26059402-26059619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
346-560
               

               
Cow position:
               
chr25:24066759-24066556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
346-640
               

               
Cow position:
               
chr25:13443515-13443222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
62, 96
               

               
Conread position:
               
347-629
               

               
Cow position:
               
chr25:24207521-24207238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
113, 80
               

               
Conread position:
               
348-676
               

               
Cow position:
               
chr25:6292468-6292789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
349-583
               

               
Cow position:
               
chr25:26051803-26052034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
133, 12
               

               
Conread position:
               
358-652
               

               
Cow position:
               
chr25:26578701-26578403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
304
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
43, 177
               

               
Conread position:
               
359-676
               

               
Cow position:
               
chr25:9315931-9316242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
6e-29
               

               
Alignm gaps (pig, cow):
               
65, 42
               

               
Conread position:
               
360-629
               

               
Cow position:
               
chr25:16100497-16100760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
216, 43
               

               
Conread position:
               
361-641
               

               
Cow position:
               
chr25:36835514-36835246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
44, 38
               

               
Conread position:
               
361-674
               

               
Cow position:
               
chr25:12305189-12305497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
361-681
               

               
Cow position:
               
chr25:17724969-17725258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
362-629
               

               
Cow position:
               
chr25:12806958-12807217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
362-652
               

               
Cow position:
               
chr25:17474599-17474316 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
21, 29
               

               
Conread position:
               
364-629
               

               
Cow position:
               
chr25:7805880-7806142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
52, 38
               

               
Conread position:
               
364-672
               

               
Cow position:
               
chr25:35052705-35052401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 39
               

               
Conread position:
               
365-676
               

               
Cow position:
               
chr25:433132-432827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
64, 38
               

               
Conread position:
               
373-680
               

               
Cow position:
               
chr25:33555533-33555836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
283, 28
               

               
Conread position:
               
376-681
               

               
Cow position:
               
chr25:8346074-8345781 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
383-652
               

               
Cow position:
               
chr25:21183816-21184083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
40, 18
               

               
Conread position:
               
383-663
               

               
Cow position:
               
chr25:26306271-26305995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
30, 21
               

               
Conread position:
               
387-570
               

               
Cow position:
               
chr25:21266928-21267107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
103, 134
               

               
Conread position:
               
390-570
               

               
Cow position:
               
chr25:38421608-38421786 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
390-676
               

               
Cow position:
               
chr25:41130170-41130449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
390-681
               

               
Cow position:
               
chr25:10585379-10585107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
35, 13
               

               
Conread position:
               
391-651
               

               
Cow position:
               
chr25:21501109-21500846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
26, 91
               

               
Conread position:
               
392-649
               

               
Cow position:
               
chr25:8898376-8898629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
392-684
               

               
Cow position:
               
chr25:35884787-35885083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
14, 25
               

               
Conread position:
               
393-652
               

               
Cow position:
               
chr25:11956749-11957001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
9e-33
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
395-665
               

               
Cow position:
               
chr25:12206483-12206751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
256, 11
               

               
Conread position:
               
396-664
               

               
Cow position:
               
chr25:20487495-20487226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
57, 11
               

               
Conread position:
               
399-675
               

               
Cow position:
               
chr25:9025076-9025343 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
76, 22
               

               
Conread position:
               
400-678
               

               
Cow position:
               
chr25:22153983-22154253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
12, 55
               

               
Conread position:
               
403-665
               

               
Cow position:
               
chr25:10611169-10610909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
50, 21
               

               
Conread position:
               
403-683
               

               
Cow position:
               
chr25:11897670-11897390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
56, 11
               

               
Conread position:
               
407-651
               

               
Cow position:
               
chr25:9769373-9769615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
90, 80
               

               
Conread position:
               
408-648
               

               
Cow position:
               
chr25:18288810-18288577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
408-666
               

               
Cow position:
               
chr25:22348506-22348247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
410-654
               

               
Cow position:
               
chr25:21317468-21317219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
56, 154
               

               
Conread position:
               
412-684
               

               
Cow position:
               
chr25:15566045-15565760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
417-649
               

               
Cow position:
               
chr25:8102636-8102862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
417-656
               

               
Cow position:
               
chr25:7726629-7726867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
236, 148
               

               
Conread position:
               
417-680
               

               
Cow position:
               
chr25:31101824-31102078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
417-683
               

               
Cow position:
               
chr25:14110986-14111250 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
135, 7
               

               
Conread position:
               
417-683
               

               
Cow position:
               
chr25:26236544-26236282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
234, 140
               

               
Conread position:
               
418-622
               

               
Cow position:
               
chr25:5701726-5701929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
7, 127
               

               
Conread position:
               
418-649
               

               
Cow position:
               
chr25:33311359-33311129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
1e-33
               

               
Alignm gaps (pig, cow):
               
45, 164
               

               
Conread position:
               
418-652
               

               
Cow position:
               
chr25:22698502-22698271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
418-662
               

               
Cow position:
               
chr25:14225331-14225574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
418-665
               

               
Cow position:
               
chr25:35384369-35384126 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
40, 34
               

               
Conread position:
               
418-666
               

               
Cow position:
               
chr25:13222868-13223107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
418-674
               

               
Cow position:
               
chr25:35109301-35109062 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
420-643
               

               
Cow position:
               
chr25:35339220-35339002 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
82, 153
               

               
Conread position:
               
421-574
               

               
Cow position:
               
chr25:4009064-4009217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
421-666
               

               
Cow position:
               
chr25:18760737-18760500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-39
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
421-667
               

               
Cow position:
               
chr25:19069861-19069619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
47, 100
               

               
Conread position:
               
421-673
               

               
Cow position:
               
chr25:28597641-28597387 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
49, 232
               

               
Conread position:
               
421-676
               

               
Cow position:
               
chr25:12657338-12657081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
229, 161
               

               
Conread position:
               
421-679
               

               
Cow position:
               
chr25:28423114-28423372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
48, 146
               

               
Conread position:
               
421-682
               

               
Cow position:
               
chr25:28986835-28987089 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
422-681
               

               
Cow position:
               
chr25:17918946-17919205 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7.00005e-41
               

               
Alignm gaps (pig, cow):
               
135, 154
               

               
Conread position:
               
423-649
               

               
Cow position:
               
chr25:5797477-5797701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
212, 139
               

               
Conread position:
               
423-652
               

               
Cow position:
               
chr25:536333-536106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
160, 0
               

               
Conread position:
               
423-680
               

               
Cow position:
               
chr25:27622091-27622337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
423-684
               

               
Cow position:
               
chr25:12637719-12637973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
424-625
               

               
Cow position:
               
chr25:13108055-13107853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
144, 98
               

               
Conread position:
               
425-579
               

               
Cow position:
               
chr25:12064023-12064178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
5e-27
               

               
Alignm gaps (pig, cow):
               
145, 114
               

               
Conread position:
               
426-629
               

               
Cow position:
               
chr25:6718270-6718080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
125, 55
               

               
Conread position:
               
431-583
               

               
Cow position:
               
chr25:15294777-15294929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
431-667
               

               
Cow position:
               
chr25:20085552-20085790 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-30
               

               
Alignm gaps (pig, cow):
               
19, 154
               

               
Conread position:
               
433-653
               

               
Cow position:
               
chr25:3744762-3744536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
433-656
               

               
Cow position:
               
chr25:23520045-23519836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
50, 0
               

               
Conread position:
               
434-649
               

               
Cow position:
               
chr25:10791830-10791625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
434-652
               

               
Cow position:
               
chr25:10657058-10656841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
69, 131
               

               
Conread position:
               
434-668
               

               
Cow position:
               
chr25:8863408-8863171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
189, 147
               

               
Conread position:
               
434-682
               

               
Cow position:
               
chr25:34982177-34981932 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
59, 151
               

               
Conread position:
               
435-652
               

               
Cow position:
               
chr25:14106817-14107034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
136, 56
               

               
Conread position:
               
435-666
               

               
Cow position:
               
chr25:33101620-33101401 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
215, 122
               

               
Conread position:
               
441-674
               

               
Cow position:
               
chr25:31514172-31514403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
140, 0
               

               
Conread position:
               
442-652
               

               
Cow position:
               
chr25:7277333-7277128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
7, 22
               

               
Conread position:
               
442-669
               

               
Cow position:
               
chr25:5807937-5808159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
5e-38
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
443-652
               

               
Cow position:
               
chr25:36873063-36872858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
446-648
               

               
Cow position:
               
chr25:11857990-11857793 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
74, 7
               

               
Conread position:
               
447-652
               

               
Cow position:
               
chr25:28945017-28945213 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
119, 129
               

               
Conread position:
               
450-580
               

               
Cow position:
               
chr25:5515306-5515434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
99
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
450-621
               

               
Cow position:
               
chr25:13049302-13049134 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
52, 62
               

               
Conread position:
               
451-673
               

               
Cow position:
               
chr25:36369820-36370041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
198, 64
               

               
Conread position:
               
451-673
               

               
Cow position:
               
chr25:36375511-36375732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
198, 64
               

               
Conread position:
               
452-641
               

               
Cow position:
               
chr25:18646587-18646766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
454-674
               

               
Cow position:
               
chr25:2262819-2263036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
46, 52
               

               
Conread position:
               
454-679
               

               
Cow position:
               
chr25:18551330-18551112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
75, 0
               

               
Conread position:
               
455-638
               

               
Cow position:
               
chr25:23323495-23323680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
455-673
               

               
Cow position:
               
chr25:16875039-16874825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-31
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
455-675
               

               
Cow position:
               
chr25:18491043-18491253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
456-652
               

               
Cow position:
               
chr25:17724218-17724023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
46, 120
               

               
Conread position:
               
456-672
               

               
Cow position:
               
chr25:14164205-14164417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
198, 22
               

               
Conread position:
               
457-652
               

               
Cow position:
               
chr25:13542979-13542787 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
97, 86
               

               
Conread position:
               
457-659
               

               
Cow position:
               
chr25:17137879-17138080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
107, 54
               

               
Conread position:
               
457-672
               

               
Cow position:
               
chr25:1982975-1982768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
457-684
               

               
Cow position:
               
chr25:15423618-15423388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
98, 125
               

               
Conread position:
               
458-677
               

               
Cow position:
               
chr25:31705232-31705449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
461-681
               

               
Cow position:
               
chr25:4192016-4192233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
462-652
               

               
Cow position:
               
chr25:26100706-26100890 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
462-666
               

               
Cow position:
               
chr25:22849040-22848830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
4e-25
               

               
Alignm gaps (pig, cow):
               
53, 0
               

               
Conread position:
               
462-677
               

               
Cow position:
               
chr25:6973300-6973509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
93, 49
               

               
Conread position:
               
463-673
               

               
Cow position:
               
chr25:22373477-22373268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
143, 118
               

               
Conread position:
               
463-677
               

               
Cow position:
               
chr25:7403328-7403116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
464-653
               

               
Cow position:
               
chr25:24115302-24115117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
465-629
               

               
Cow position:
               
chr25:7005527-7005689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
465-664
               

               
Cow position:
               
chr25:9023766-9023953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
465-668
               

               
Cow position:
               
chr25:26269702-26269502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
465-680
               

               
Cow position:
               
chr25:33100590-33100797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
466-645
               

               
Cow position:
               
chr25:26061711-26061534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
467-673
               

               
Cow position:
               
chr25:28662127-28662322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
100, 0
               

               
Conread position:
               
469-649
               

               
Cow position:
               
chr25:8411015-8410839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
471-667
               

               
Cow position:
               
chr25:14457170-14457364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
471-683
               

               
Cow position:
               
chr25:21443348-21443141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
471-684
               

               
Cow position:
               
chr25:32745359-32745565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
189, 95
               

               
Conread position:
               
472-684
               

               
Cow position:
               
chr25:7311374-7311165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-28
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
478-684
               

               
Cow position:
               
chr25:15999525-15999321 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
9e-22
               

               
Alignm gaps (pig, cow):
               
9, 70
               

               
Conread position:
               
483-652
               

               
Cow position:
               
chr25:11057246-11057412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
483-670
               

               
Cow position:
               
chr25:6061392-6061577 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
10, 99
               

               
Conread position:
               
484-629
               

               
Cow position:
               
chr25:11855515-11855373 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
484-649
               

               
Cow position:
               
chr25:27825135-27825298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
484-675
               

               
Cow position:
               
chr25:26989231-26989423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
164, 89
               

               
Conread position:
               
484-676
               

               
Cow position:
               
chr25:21547191-21547376 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
185, 79
               

               
Conread position:
               
489-665
               

               
Cow position:
               
chr25:22768257-22768428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
491-652
               

               
Cow position:
               
chr25:33272674-33272835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
50, 93
               

               
Conread position:
               
492-622
               

               
Cow position:
               
chr25:18568175-18568047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
131
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
492-655
               

               
Cow position:
               
chr25:32750117-32750276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
164
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
4e-26
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
493-660
               

               
Cow position:
               
chr25:25886555-25886390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
73, 0
               

               
Conread position:
               
496-664
               

               
Cow position:
               
chr25:7185230-7185064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
119
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
496-684
               

               
Cow position:
               
chr25:8890705-8890894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
58, 15
               

               
Conread position:
               
498-669
               

               
Cow position:
               
chr25:11405846-11406015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
502-683
               

               
Cow position:
               
chr25:22119605-22119428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
139, 79
               

               
Conread position:
               
508-652
               

               
Cow position:
               
chr25:22642322-22642470 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
66, 0
               

               
Conread position:
               
508-665
               

               
Cow position:
               
chr25:19460131-19460286 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
46, 35
               

               
Conread position:
               
519-684
               

               
Cow position:
               
chr25:9556375-9556207 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
3e-23
               

               
Alignm gaps (pig, cow):
               
129, 67
               

               
Conread position:
               
523-667
               

               
Cow position:
               
chr25:27959207-27959349 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
147
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
31, 24
               

               
Conread position:
               
525-666
               

               
Cow position:
               
chr25:12817725-12817863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
105
               

               
Alignm E-value:
               
8e-21
               

               
Alignm gaps (pig, cow):
               
50, 0
               
Show alignments to all cow chromosomes.