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Cow genome map

           
Conread name:
           
Ss1.1-pigcb_1823.5
        

               
Conread position:
               
163-653
               

               
Cow position:
               
chr27:20552536-20553020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
510
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
12, 32
               

               
Conread position:
               
164-436
               

               
Cow position:
               
chr27:27550519-27550773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
176-680
               

               
Cow position:
               
chr27:30915221-30914735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
475, 103
               

               
Conread position:
               
180-331
               

               
Cow position:
               
chr27:264467-264317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
153
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
16, 33
               

               
Conread position:
               
180-419
               

               
Cow position:
               
chr27:18434259-18434486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
83, 15
               

               
Conread position:
               
180-648
               

               
Cow position:
               
chr27:12596972-12596543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
18, 30
               

               
Conread position:
               
182-398
               

               
Cow position:
               
chr27:22179584-22179788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
87, 0
               

               
Conread position:
               
182-579
               

               
Cow position:
               
chr27:20795997-20795618 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
226, 79
               

               
Conread position:
               
182-586
               

               
Cow position:
               
chr27:6074129-6073761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
180, 30
               

               
Conread position:
               
182-662
               

               
Cow position:
               
chr27:1636731-1637179 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
99, 27
               

               
Conread position:
               
182-668
               

               
Cow position:
               
chr27:15668554-15669033 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 30
               

               
Conread position:
               
183-392
               

               
Cow position:
               
chr27:29019533-29019742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
13, 148
               

               
Conread position:
               
184-553
               

               
Cow position:
               
chr27:26151230-26150869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
235, 12
               

               
Conread position:
               
184-652
               

               
Cow position:
               
chr27:23128667-23128222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
12, 81
               

               
Conread position:
               
185-560
               

               
Cow position:
               
chr27:19647733-19648098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
11, 31
               

               
Conread position:
               
186-460
               

               
Cow position:
               
chr27:29251089-29250824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
187-447
               

               
Cow position:
               
chr27:25791012-25790761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
187-643
               

               
Cow position:
               
chr27:26864911-26865342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
265, 25
               

               
Conread position:
               
188-684
               

               
Cow position:
               
chr27:27003074-27003529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
497
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
190-534
               

               
Cow position:
               
chr27:4858444-4858769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
54, 24
               

               
Conread position:
               
191-532
               

               
Cow position:
               
chr27:30551200-30550862 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
153, 71
               

               
Conread position:
               
191-681
               

               
Cow position:
               
chr27:26433608-26434087 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
494
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
390, 31
               

               
Conread position:
               
192-373
               

               
Cow position:
               
chr27:26436671-26436852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
133, 21
               

               
Conread position:
               
192-538
               

               
Cow position:
               
chr27:27521801-27522132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
171, 135
               

               
Conread position:
               
192-614
               

               
Cow position:
               
chr27:23632803-23632395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
330, 33
               

               
Conread position:
               
192-673
               

               
Cow position:
               
chr27:17473016-17472550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 99
               

               
Conread position:
               
193-553
               

               
Cow position:
               
chr27:30354143-30354493 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
193-573
               

               
Cow position:
               
chr27:8942481-8942858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
227, 99
               

               
Conread position:
               
194-574
               

               
Cow position:
               
chr27:19589680-19589303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
37, 138
               

               
Conread position:
               
194-584
               

               
Cow position:
               
chr27:25277337-25276964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 18
               

               
Conread position:
               
194-586
               

               
Cow position:
               
chr27:910883-911276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
186, 97
               

               
Conread position:
               
194-593
               

               
Cow position:
               
chr27:26218900-26218525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
216, 61
               

               
Conread position:
               
194-670
               

               
Cow position:
               
chr27:28001617-28002065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
457, 44
               

               
Conread position:
               
194-671
               

               
Cow position:
               
chr27:15867592-15867129 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 63
               

               
Conread position:
               
194-684
               

               
Cow position:
               
chr27:13875933-13875458 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 25
               

               
Conread position:
               
195-472
               

               
Cow position:
               
chr27:732771-732505 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
195-544
               

               
Cow position:
               
chr27:2390495-2390152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
341, 131
               

               
Conread position:
               
196-668
               

               
Cow position:
               
chr27:28921698-28922154 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
285, 16
               

               
Conread position:
               
197-333
               

               
Cow position:
               
chr27:26406845-26406978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
137
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
197-335
               

               
Cow position:
               
chr27:11762541-11762679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
101
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
197-351
               

               
Cow position:
               
chr27:6674434-6674287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
114, 15
               

               
Conread position:
               
197-372
               

               
Cow position:
               
chr27:26625324-26625153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
12, 86
               

               
Conread position:
               
197-388
               

               
Cow position:
               
chr27:21418868-21419055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
197-400
               

               
Cow position:
               
chr27:11723706-11723904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
139, 0
               

               
Conread position:
               
197-404
               

               
Cow position:
               
chr27:16620189-16619986 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
197-410
               

               
Cow position:
               
chr27:27055776-27055567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
156, 127
               

               
Conread position:
               
197-410
               

               
Cow position:
               
chr27:30177376-30177584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
193, 126
               

               
Conread position:
               
197-412
               

               
Cow position:
               
chr27:6058700-6058491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
197-412
               

               
Cow position:
               
chr27:29400015-29399805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
58, 13
               

               
Conread position:
               
197-424
               

               
Cow position:
               
chr27:13198114-13197896 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
187, 17
               

               
Conread position:
               
197-437
               

               
Cow position:
               
chr27:18215254-18215020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
197-447
               

               
Cow position:
               
chr27:22330472-22330716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
153, 15
               

               
Conread position:
               
197-450
               

               
Cow position:
               
chr27:15858893-15859135 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
223, 17
               

               
Conread position:
               
197-454
               

               
Cow position:
               
chr27:16871721-16871966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
226, 16
               

               
Conread position:
               
197-459
               

               
Cow position:
               
chr27:26398061-26398313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
197-460
               

               
Cow position:
               
chr27:1183678-1183940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
147, 49
               

               
Conread position:
               
197-460
               

               
Cow position:
               
chr27:27141790-27141546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
182, 16
               

               
Conread position:
               
197-460
               

               
Cow position:
               
chr27:31147475-31147725 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
197-468
               

               
Cow position:
               
chr27:27259806-27259550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
197-473
               

               
Cow position:
               
chr27:30362441-30362177 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
197-474
               

               
Cow position:
               
chr27:29283212-29283478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
197-475
               

               
Cow position:
               
chr27:6523244-6522973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
80, 104
               

               
Conread position:
               
197-475
               

               
Cow position:
               
chr27:11255711-11255454 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
197-475
               

               
Cow position:
               
chr27:23070162-23070430 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
197-475
               

               
Cow position:
               
chr27:24445958-24446228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
197-475
               

               
Cow position:
               
chr27:27040807-27040531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
12, 95
               

               
Conread position:
               
197-477
               

               
Cow position:
               
chr27:21569645-21569913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
197-479
               

               
Cow position:
               
chr27:2682945-2683220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
140, 104
               

               
Conread position:
               
197-480
               

               
Cow position:
               
chr27:20765765-20766036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
209, 97
               

               
Conread position:
               
197-511
               

               
Cow position:
               
chr27:24999536-24999847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
197-512
               

               
Cow position:
               
chr27:9090603-9090898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
197-512
               

               
Cow position:
               
chr27:12429606-12429299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
320
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
71, 15
               

               
Conread position:
               
197-512
               

               
Cow position:
               
chr27:26807365-26807673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
191, 94
               

               
Conread position:
               
197-520
               

               
Cow position:
               
chr27:30792739-30793049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
197-521
               

               
Cow position:
               
chr27:23472456-23472142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
9, 130
               

               
Conread position:
               
197-524
               

               
Cow position:
               
chr27:25380189-25379868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
182, 80
               

               
Conread position:
               
197-528
               

               
Cow position:
               
chr27:1498512-1498192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
58, 0
               

               
Conread position:
               
197-530
               

               
Cow position:
               
chr27:15644259-15644587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
206, 129
               

               
Conread position:
               
197-530
               

               
Cow position:
               
chr27:27843794-27844128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
223, 128
               

               
Conread position:
               
197-549
               

               
Cow position:
               
chr27:26785782-26786136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
94, 17
               

               
Conread position:
               
197-551
               

               
Cow position:
               
chr27:24014543-24014886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
156, 15
               

               
Conread position:
               
197-553
               

               
Cow position:
               
chr27:1123220-1122883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
197-553
               

               
Cow position:
               
chr27:24321386-24321041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
197-558
               

               
Cow position:
               
chr27:20553915-20553578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
76, 0
               

               
Conread position:
               
197-559
               

               
Cow position:
               
chr27:19543711-19544075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
185, 82
               

               
Conread position:
               
197-560
               

               
Cow position:
               
chr27:536655-536309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
230, 31
               

               
Conread position:
               
197-560
               

               
Cow position:
               
chr27:12246858-12246498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
22, 106
               

               
Conread position:
               
197-566
               

               
Cow position:
               
chr27:11081394-11081039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
8, 16
               

               
Conread position:
               
197-570
               

               
Cow position:
               
chr27:16284670-16284310 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
220, 15
               

               
Conread position:
               
197-570
               

               
Cow position:
               
chr27:21452872-21453260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 15
               

               
Conread position:
               
197-571
               

               
Cow position:
               
chr27:19685516-19685881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
228, 95
               

               
Conread position:
               
197-573
               

               
Cow position:
               
chr27:4673219-4672843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
222, 96
               

               
Conread position:
               
197-574
               

               
Cow position:
               
chr27:22454581-22454946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
13, 94
               

               
Conread position:
               
197-574
               

               
Cow position:
               
chr27:30359593-30359237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
197-575
               

               
Cow position:
               
chr27:27038646-27039008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
236, 15
               

               
Conread position:
               
197-577
               

               
Cow position:
               
chr27:25783800-25783453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
55, 15
               

               
Conread position:
               
197-578
               

               
Cow position:
               
chr27:15272104-15271746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
128, 57
               

               
Conread position:
               
197-579
               

               
Cow position:
               
chr27:26643871-26643515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
147, 52
               

               
Conread position:
               
197-580
               

               
Cow position:
               
chr27:23483421-23483050 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
223, 74
               

               
Conread position:
               
197-586
               

               
Cow position:
               
chr27:4385867-4386243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 97
               

               
Conread position:
               
197-613
               

               
Cow position:
               
chr27:27640794-27641218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 15
               

               
Conread position:
               
197-620
               

               
Cow position:
               
chr27:1768437-1768833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
214, 45
               

               
Conread position:
               
197-625
               

               
Cow position:
               
chr27:13317756-13318193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 131
               

               
Conread position:
               
197-629
               

               
Cow position:
               
chr27:16960395-16959978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
256, 79
               

               
Conread position:
               
197-629
               

               
Cow position:
               
chr27:30605881-30605479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
136, 95
               

               
Conread position:
               
197-641
               

               
Cow position:
               
chr27:7958637-7959063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
130, 74
               

               
Conread position:
               
197-646
               

               
Cow position:
               
chr27:13411160-13411605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
119, 12
               

               
Conread position:
               
197-648
               

               
Cow position:
               
chr27:2957606-2957178 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 134
               

               
Conread position:
               
197-651
               

               
Cow position:
               
chr27:27245154-27245604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
147, 13
               

               
Conread position:
               
197-651
               

               
Cow position:
               
chr27:28018535-28018081 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
308, 122
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr27:2930398-2930834 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
200, 84
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr27:7412581-7412150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
446, 127
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr27:10582561-10582128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
92, 105
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr27:10980062-10979617 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 0
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr27:18030861-18031313 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
193, 22
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr27:21408354-21408813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 219
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr27:22603361-22602931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
392, 74
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr27:24227595-24228047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 94
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr27:25809325-25809759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
136, 15
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr27:26999226-26999666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
145, 64
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr27:28206996-28206561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
211, 128
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr27:30868542-30868994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
348, 15
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr27:31216965-31217409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
322, 130
               

               
Conread position:
               
197-653
               

               
Cow position:
               
chr27:22171496-22171058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
226, 20
               

               
Conread position:
               
197-654
               

               
Cow position:
               
chr27:6541823-6541388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
446, 79
               

               
Conread position:
               
197-657
               

               
Cow position:
               
chr27:8062160-8062600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
447, 12
               

               
Conread position:
               
197-657
               

               
Cow position:
               
chr27:14670184-14670628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
173, 16
               

               
Conread position:
               
197-658
               

               
Cow position:
               
chr27:30765230-30764783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
215, 83
               

               
Conread position:
               
197-659
               

               
Cow position:
               
chr27:6500263-6499808 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 0
               

               
Conread position:
               
197-659
               

               
Cow position:
               
chr27:16787025-16786581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
197-659
               

               
Cow position:
               
chr27:24331924-24331464 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
124, 95
               

               
Conread position:
               
197-662
               

               
Cow position:
               
chr27:22549584-22550023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
319, 10
               

               
Conread position:
               
197-663
               

               
Cow position:
               
chr27:299185-299628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
309
               

               
Alignm E-value:
               
2.8026e-45
               

               
Alignm gaps (pig, cow):
               
187, 128
               

               
Conread position:
               
197-664
               

               
Cow position:
               
chr27:28518483-28518042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
267, 13
               

               
Conread position:
               
197-665
               

               
Cow position:
               
chr27:10307097-10307558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 108
               

               
Conread position:
               
197-665
               

               
Cow position:
               
chr27:28931589-28932059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
266, 372
               

               
Conread position:
               
197-665
               

               
Cow position:
               
chr27:30406833-30407301 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
86, 108
               

               
Conread position:
               
197-665
               

               
Cow position:
               
chr27:31230896-31231334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
197-666
               

               
Cow position:
               
chr27:15454411-15453956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 85
               

               
Conread position:
               
197-666
               

               
Cow position:
               
chr27:26224071-26224513 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
197-666
               

               
Cow position:
               
chr27:27632411-27632851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
454, 95
               

               
Conread position:
               
197-667
               

               
Cow position:
               
chr27:4390056-4390517 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
253, 99
               

               
Conread position:
               
197-668
               

               
Cow position:
               
chr27:30890485-30890044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
197-669
               

               
Cow position:
               
chr27:26427930-26428390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
451, 130
               

               
Conread position:
               
197-671
               

               
Cow position:
               
chr27:2592739-2592274 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
217, 11
               

               
Conread position:
               
197-671
               

               
Cow position:
               
chr27:7934965-7935418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
297, 90
               

               
Conread position:
               
197-672
               

               
Cow position:
               
chr27:27019902-27020360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 17
               

               
Conread position:
               
197-672
               

               
Cow position:
               
chr27:30582936-30582474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
198, 84
               

               
Conread position:
               
197-673
               

               
Cow position:
               
chr27:7971768-7971295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
206, 94
               

               
Conread position:
               
197-673
               

               
Cow position:
               
chr27:22035175-22035636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 16
               

               
Conread position:
               
197-676
               

               
Cow position:
               
chr27:15866421-15865962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
129, 15
               

               
Conread position:
               
197-678
               

               
Cow position:
               
chr27:13638794-13639258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
366, 80
               

               
Conread position:
               
197-678
               

               
Cow position:
               
chr27:18507830-18507378 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
424, 84
               

               
Conread position:
               
197-678
               

               
Cow position:
               
chr27:31372781-31373241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
205, 72
               

               
Conread position:
               
197-680
               

               
Cow position:
               
chr27:1353781-1353309 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
113, 16
               

               
Conread position:
               
197-680
               

               
Cow position:
               
chr27:30374372-30374852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
134, 74
               

               
Conread position:
               
197-681
               

               
Cow position:
               
chr27:15925533-15925074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 76
               

               
Conread position:
               
197-683
               

               
Cow position:
               
chr27:11815561-11816019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
197-684
               

               
Cow position:
               
chr27:12516397-12515919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 88
               

               
Conread position:
               
197-684
               

               
Cow position:
               
chr27:17397251-17397724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
223, 12
               

               
Conread position:
               
197-684
               

               
Cow position:
               
chr27:20354778-20354324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
490
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
451, 57
               

               
Conread position:
               
197-684
               

               
Cow position:
               
chr27:22220752-22220273 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
220, 130
               

               
Conread position:
               
198-469
               

               
Cow position:
               
chr27:14902452-14902718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
207, 5
               

               
Conread position:
               
198-504
               

               
Cow position:
               
chr27:21350818-21351121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
198-520
               

               
Cow position:
               
chr27:4812680-4812999 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
56, 14
               

               
Conread position:
               
198-521
               

               
Cow position:
               
chr27:815562-815245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
213, 55
               

               
Conread position:
               
198-545
               

               
Cow position:
               
chr27:7289912-7290243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
209, 93
               

               
Conread position:
               
198-571
               

               
Cow position:
               
chr27:25411322-25411675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
155, 94
               

               
Conread position:
               
198-629
               

               
Cow position:
               
chr27:20067781-20068195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
434
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
192, 57
               

               
Conread position:
               
198-629
               

               
Cow position:
               
chr27:22426633-22427055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 11
               

               
Conread position:
               
198-640
               

               
Cow position:
               
chr27:23554122-23554560 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 222
               

               
Conread position:
               
198-666
               

               
Cow position:
               
chr27:29184645-29185103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
356, 61
               

               
Conread position:
               
198-669
               

               
Cow position:
               
chr27:18544195-18543730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
137, 94
               

               
Conread position:
               
198-676
               

               
Cow position:
               
chr27:6550648-6550193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
369, 84
               

               
Conread position:
               
198-676
               

               
Cow position:
               
chr27:15315688-15315259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
141, 11
               

               
Conread position:
               
198-682
               

               
Cow position:
               
chr27:20869503-20869953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
444, 128
               

               
Conread position:
               
199-361
               

               
Cow position:
               
chr27:18922646-18922491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
163
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
199-373
               

               
Cow position:
               
chr27:2011907-2012075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
158, 28
               

               
Conread position:
               
199-399
               

               
Cow position:
               
chr27:22771954-22771754 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
94, 87
               

               
Conread position:
               
199-412
               

               
Cow position:
               
chr27:22498749-22498547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
26, 34
               

               
Conread position:
               
199-465
               

               
Cow position:
               
chr27:2298608-2298345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
19, 29
               

               
Conread position:
               
199-568
               

               
Cow position:
               
chr27:26413059-26413418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
199-580
               

               
Cow position:
               
chr27:4835411-4835783 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
344, 126
               

               
Conread position:
               
199-597
               

               
Cow position:
               
chr27:23882178-23882559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
383, 41
               

               
Conread position:
               
199-629
               

               
Cow position:
               
chr27:26239220-26238804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
56, 34
               

               
Conread position:
               
199-652
               

               
Cow position:
               
chr27:23452676-23452220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
113, 216
               

               
Conread position:
               
199-666
               

               
Cow position:
               
chr27:19497071-19496621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
163, 90
               

               
Conread position:
               
199-678
               

               
Cow position:
               
chr27:20828511-20828971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
102, 51
               

               
Conread position:
               
199-684
               

               
Cow position:
               
chr27:15871358-15870883 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
8.40779e-45
               

               
Alignm gaps (pig, cow):
               
27, 68
               

               
Conread position:
               
199-684
               

               
Cow position:
               
chr27:19546308-19546796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
77, 20
               

               
Conread position:
               
200-511
               

               
Cow position:
               
chr27:1058484-1058784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
201, 140
               

               
Conread position:
               
200-530
               

               
Cow position:
               
chr27:6454410-6454082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
54, 67
               

               
Conread position:
               
200-565
               

               
Cow position:
               
chr27:15319647-15319298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
54, 128
               

               
Conread position:
               
200-640
               

               
Cow position:
               
chr27:19661138-19660697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 60
               

               
Conread position:
               
200-648
               

               
Cow position:
               
chr27:15204036-15204475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
84, 110
               

               
Conread position:
               
200-652
               

               
Cow position:
               
chr27:22440335-22439894 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
303, 85
               

               
Conread position:
               
200-652
               

               
Cow position:
               
chr27:27388832-27389270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
10, 54
               

               
Conread position:
               
200-655
               

               
Cow position:
               
chr27:18558559-18558112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
200-666
               

               
Cow position:
               
chr27:21977942-21978400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
293, 59
               

               
Conread position:
               
201-517
               

               
Cow position:
               
chr27:25998899-25998589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
245, 126
               

               
Conread position:
               
201-545
               

               
Cow position:
               
chr27:18967560-18967895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
111, 128
               

               
Conread position:
               
201-560
               

               
Cow position:
               
chr27:21393310-21393663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
198, 90
               

               
Conread position:
               
201-581
               

               
Cow position:
               
chr27:27683923-27684289 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
9, 0
               

               
Conread position:
               
201-629
               

               
Cow position:
               
chr27:11535902-11536327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 143
               

               
Conread position:
               
202-677
               

               
Cow position:
               
chr27:28276465-28275993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
486
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
128, 11
               

               
Conread position:
               
202-683
               

               
Cow position:
               
chr27:1903256-1902791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
96, 152
               

               
Conread position:
               
203-313
               

               
Cow position:
               
chr27:23736282-23736172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
111
               

               
Alignm identity:
               
90
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
203-460
               

               
Cow position:
               
chr27:28038144-28038395 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
10, 123
               

               
Conread position:
               
203-507
               

               
Cow position:
               
chr27:26379986-26380275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
203-638
               

               
Cow position:
               
chr27:18739580-18739145 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
443
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 70
               

               
Conread position:
               
203-669
               

               
Cow position:
               
chr27:16705439-16704989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
233, 64
               

               
Conread position:
               
204-680
               

               
Cow position:
               
chr27:27554495-27554951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
461, 38
               

               
Conread position:
               
205-401
               

               
Cow position:
               
chr27:26440866-26441060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
205-428
               

               
Cow position:
               
chr27:20592174-20591955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
215, 76
               

               
Conread position:
               
205-579
               

               
Cow position:
               
chr27:30988989-30988623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 99
               

               
Conread position:
               
205-666
               

               
Cow position:
               
chr27:27856524-27856082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
162, 86
               

               
Conread position:
               
206-461
               

               
Cow position:
               
chr27:30670927-30670683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
209, 63
               

               
Conread position:
               
206-578
               

               
Cow position:
               
chr27:22418575-22418941 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
213, 109
               

               
Conread position:
               
209-568
               

               
Cow position:
               
chr27:10992540-10992192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 82
               

               
Conread position:
               
209-574
               

               
Cow position:
               
chr27:27064253-27064609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
366
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
212-544
               

               
Cow position:
               
chr27:11562958-11563279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
138, 91
               

               
Conread position:
               
212-563
               

               
Cow position:
               
chr27:13252193-13251857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
132, 111
               

               
Conread position:
               
212-666
               

               
Cow position:
               
chr27:22547221-22547645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
212-668
               

               
Cow position:
               
chr27:20636897-20637317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
4.99997e-41
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
212-684
               

               
Cow position:
               
chr27:6788142-6787677 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
199, 54
               

               
Conread position:
               
213-341
               

               
Cow position:
               
chr27:68258-68385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
130
               

               
Alignm identity:
               
104
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
121, 61
               

               
Conread position:
               
213-552
               

               
Cow position:
               
chr27:18593453-18593125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7.00649e-43
               

               
Alignm gaps (pig, cow):
               
112, 0
               

               
Conread position:
               
213-651
               

               
Cow position:
               
chr27:19718106-19717656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
195, 73
               

               
Conread position:
               
213-675
               

               
Cow position:
               
chr27:26508975-26509421 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
215-412
               

               
Cow position:
               
chr27:23454961-23455165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
41, 37
               

               
Conread position:
               
215-652
               

               
Cow position:
               
chr27:29831506-29831951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 78
               

               
Conread position:
               
215-656
               

               
Cow position:
               
chr27:11435148-11435574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
338, 50
               

               
Conread position:
               
216-512
               

               
Cow position:
               
chr27:4067-3789 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
220-675
               

               
Cow position:
               
chr27:7851552-7851125 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
337, 56
               

               
Conread position:
               
221-558
               

               
Cow position:
               
chr27:9169470-9169792 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
338
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
70, 0
               

               
Conread position:
               
223-433
               

               
Cow position:
               
chr27:24357438-24357231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
127, 180
               

               
Conread position:
               
224-565
               

               
Cow position:
               
chr27:15408872-15409197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
224-656
               

               
Cow position:
               
chr27:13841548-13841116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
160, 128
               

               
Conread position:
               
224-663
               

               
Cow position:
               
chr27:28496203-28496624 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
125, 101
               

               
Conread position:
               
224-680
               

               
Cow position:
               
chr27:25427737-25428182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
197, 31
               

               
Conread position:
               
226-460
               

               
Cow position:
               
chr27:22268674-22268445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
226-578
               

               
Cow position:
               
chr27:1290695-1291022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
228-579
               

               
Cow position:
               
chr27:15643343-15643000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
99, 0
               

               
Conread position:
               
231-670
               

               
Cow position:
               
chr27:24477581-24477166 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
232-673
               

               
Cow position:
               
chr27:27438341-27438772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
107, 30
               

               
Conread position:
               
232-674
               

               
Cow position:
               
chr27:4944365-4944773 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
423, 59
               

               
Conread position:
               
233-652
               

               
Cow position:
               
chr27:30871897-30872300 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 0
               

               
Conread position:
               
234-574
               

               
Cow position:
               
chr27:29431622-29431299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
234-622
               

               
Cow position:
               
chr27:19896918-19896550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
234-668
               

               
Cow position:
               
chr27:7346822-7346408 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
4e-37
               

               
Alignm gaps (pig, cow):
               
370, 49
               

               
Conread position:
               
234-674
               

               
Cow position:
               
chr27:19668627-19669068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 101
               

               
Conread position:
               
235-578
               

               
Cow position:
               
chr27:27270377-27270715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 69
               

               
Conread position:
               
236-666
               

               
Cow position:
               
chr27:16781024-16780602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
298, 72
               

               
Conread position:
               
236-684
               

               
Cow position:
               
chr27:11480470-11480913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
182, 53
               

               
Conread position:
               
240-629
               

               
Cow position:
               
chr27:23891093-23890713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
315, 43
               

               
Conread position:
               
241-640
               

               
Cow position:
               
chr27:22735447-22735825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
6.00036e-42
               

               
Alignm gaps (pig, cow):
               
178, 53
               

               
Conread position:
               
241-652
               

               
Cow position:
               
chr27:22513520-22513924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
417
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 59
               

               
Conread position:
               
242-643
               

               
Cow position:
               
chr27:7731095-7731508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
173, 49
               

               
Conread position:
               
243-593
               

               
Cow position:
               
chr27:28270994-28271337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
96, 48
               

               
Conread position:
               
244-683
               

               
Cow position:
               
chr27:427124-426698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
108, 81
               

               
Conread position:
               
246-626
               

               
Cow position:
               
chr27:26489752-26490122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
166, 79
               

               
Conread position:
               
246-681
               

               
Cow position:
               
chr27:7649433-7649863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
445
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 84
               

               
Conread position:
               
248-665
               

               
Cow position:
               
chr27:28467291-28467724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
66, 145
               

               
Conread position:
               
258-673
               

               
Cow position:
               
chr27:5745006-5744591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
426
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
126, 70
               

               
Conread position:
               
265-546
               

               
Cow position:
               
chr27:20919023-20918749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
154, 105
               

               
Conread position:
               
265-664
               

               
Cow position:
               
chr27:29816491-29816884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
242, 37
               

               
Conread position:
               
265-666
               

               
Cow position:
               
chr27:17331633-17331235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
143, 63
               

               
Conread position:
               
266-682
               

               
Cow position:
               
chr27:19500099-19500506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
420
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
19, 64
               

               
Conread position:
               
267-548
               

               
Cow position:
               
chr27:715635-715357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
155, 76
               

               
Conread position:
               
270-580
               

               
Cow position:
               
chr27:8168300-8168606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 56
               

               
Conread position:
               
271-460
               

               
Cow position:
               
chr27:4011807-4011623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
272-656
               

               
Cow position:
               
chr27:16965715-16965327 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
59, 138
               

               
Conread position:
               
277-683
               

               
Cow position:
               
chr27:16275552-16275953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
192, 26
               

               
Conread position:
               
280-645
               

               
Cow position:
               
chr27:27442051-27442396 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
367
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
140, 95
               

               
Conread position:
               
282-680
               

               
Cow position:
               
chr27:26919785-26920197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
50, 76
               

               
Conread position:
               
285-652
               

               
Cow position:
               
chr27:23545206-23545581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
47, 114
               

               
Conread position:
               
285-680
               

               
Cow position:
               
chr27:20046000-20045626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
251, 43
               

               
Conread position:
               
287-684
               

               
Cow position:
               
chr27:26226178-26226562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
400
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-36
               

               
Alignm gaps (pig, cow):
               
96, 26
               

               
Conread position:
               
294-583
               

               
Cow position:
               
chr27:29380963-29380676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
117, 14
               

               
Conread position:
               
294-652
               

               
Cow position:
               
chr27:20078972-20078622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
107, 0
               

               
Conread position:
               
294-653
               

               
Cow position:
               
chr27:11151781-11151426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
90, 122
               

               
Conread position:
               
297-607
               

               
Cow position:
               
chr27:30260790-30261093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
130, 43
               

               
Conread position:
               
298-679
               

               
Cow position:
               
chr27:31452433-31452071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
353, 54
               

               
Conread position:
               
305-566
               

               
Cow position:
               
chr27:8263240-8263500 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
119, 71
               

               
Conread position:
               
305-666
               

               
Cow position:
               
chr27:23511084-23510718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
118, 23
               

               
Conread position:
               
305-674
               

               
Cow position:
               
chr27:22559727-22560091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
43, 23
               

               
Conread position:
               
306-639
               

               
Cow position:
               
chr27:26188915-26188597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
334
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
306-663
               

               
Cow position:
               
chr27:18646050-18646403 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
156, 84
               

               
Conread position:
               
308-666
               

               
Cow position:
               
chr27:16088907-16088533 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
35, 238
               

               
Conread position:
               
309-648
               

               
Cow position:
               
chr27:20101457-20101128 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
169, 25
               

               
Conread position:
               
312-652
               

               
Cow position:
               
chr27:21991243-21990900 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
350
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
113, 26
               

               
Conread position:
               
320-672
               

               
Cow position:
               
chr27:20748927-20749261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
97, 20
               

               
Conread position:
               
320-673
               

               
Cow position:
               
chr27:31151461-31151121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
27, 74
               

               
Conread position:
               
322-675
               

               
Cow position:
               
chr27:28896956-28896608 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
205, 18
               

               
Conread position:
               
325-586
               

               
Cow position:
               
chr27:15215310-15215047 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
89, 126
               

               
Conread position:
               
327-560
               

               
Cow position:
               
chr27:30389220-30389453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
91, 75
               

               
Conread position:
               
327-652
               

               
Cow position:
               
chr27:6925164-6924839 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 256
               

               
Conread position:
               
332-677
               

               
Cow position:
               
chr27:27405001-27405335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
51, 8
               

               
Conread position:
               
335-651
               

               
Cow position:
               
chr27:26111842-26112160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 244
               

               
Conread position:
               
338-640
               

               
Cow position:
               
chr27:22489342-22489041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
342-668
               

               
Cow position:
               
chr27:11982592-11982906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
347-573
               

               
Cow position:
               
chr27:20812960-20812736 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
45, 18
               

               
Conread position:
               
347-665
               

               
Cow position:
               
chr27:28280238-28279922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
15, 30
               

               
Conread position:
               
348-665
               

               
Cow position:
               
chr27:29693521-29693211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
238, 65
               

               
Conread position:
               
350-476
               

               
Cow position:
               
chr27:4486572-4486697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
97
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
350-684
               

               
Cow position:
               
chr27:23860221-23859887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
17, 135
               

               
Conread position:
               
354-560
               

               
Cow position:
               
chr27:10653734-10653529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
70, 48
               

               
Conread position:
               
358-682
               

               
Cow position:
               
chr27:23559986-23560304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
55, 45
               

               
Conread position:
               
359-652
               

               
Cow position:
               
chr27:26852549-26852825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
54, 0
               

               
Conread position:
               
359-667
               

               
Cow position:
               
chr27:1190432-1190740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
315
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
281, 63
               

               
Conread position:
               
359-681
               

               
Cow position:
               
chr27:15865654-15865337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
69, 55
               

               
Conread position:
               
359-681
               

               
Cow position:
               
chr27:29593585-29593895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
360-577
               

               
Cow position:
               
chr27:17918273-17918486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
361-652
               

               
Cow position:
               
chr27:10659225-10658935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
23, 187
               

               
Conread position:
               
363-666
               

               
Cow position:
               
chr27:13869663-13869361 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
62, 38
               

               
Conread position:
               
365-652
               

               
Cow position:
               
chr27:23507687-23507407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
88, 56
               

               
Conread position:
               
365-669
               

               
Cow position:
               
chr27:20517696-20517392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
314
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
19, 31
               

               
Conread position:
               
365-673
               

               
Cow position:
               
chr27:16249338-16249645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
45, 68
               

               
Conread position:
               
369-684
               

               
Cow position:
               
chr27:24394030-24393716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
58, 32
               

               
Conread position:
               
371-652
               

               
Cow position:
               
chr27:2644060-2644341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
195, 43
               

               
Conread position:
               
371-652
               

               
Cow position:
               
chr27:6290503-6290231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
192, 50
               

               
Conread position:
               
377-648
               

               
Cow position:
               
chr27:25152108-25151850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
7, 27
               

               
Conread position:
               
378-652
               

               
Cow position:
               
chr27:14818257-14817988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
47, 7
               

               
Conread position:
               
382-625
               

               
Cow position:
               
chr27:16230916-16231156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
84, 20
               

               
Conread position:
               
382-652
               

               
Cow position:
               
chr27:12425309-12425045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
93, 21
               

               
Conread position:
               
382-656
               

               
Cow position:
               
chr27:12459305-12459041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
52, 19
               

               
Conread position:
               
383-654
               

               
Cow position:
               
chr27:23594341-23594074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
383-666
               

               
Cow position:
               
chr27:5553490-5553217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-40
               

               
Alignm gaps (pig, cow):
               
13, 22
               

               
Conread position:
               
383-680
               

               
Cow position:
               
chr27:2885813-2886105 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
180, 18
               

               
Conread position:
               
384-652
               

               
Cow position:
               
chr27:10436712-10436971 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
28, 17
               

               
Conread position:
               
384-659
               

               
Cow position:
               
chr27:12564405-12564679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
42, 32
               

               
Conread position:
               
386-664
               

               
Cow position:
               
chr27:19509031-19508757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
23, 36
               

               
Conread position:
               
387-648
               

               
Cow position:
               
chr27:11561791-11561536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-30
               

               
Alignm gaps (pig, cow):
               
30, 0
               

               
Conread position:
               
388-656
               

               
Cow position:
               
chr27:15926815-15926549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
25, 136
               

               
Conread position:
               
390-585
               

               
Cow position:
               
chr27:18922818-18923013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
34, 24
               

               
Conread position:
               
390-586
               

               
Cow position:
               
chr27:1789124-1789320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
23, 66
               

               
Conread position:
               
390-652
               

               
Cow position:
               
chr27:20584445-20584710 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
170, 24
               

               
Conread position:
               
390-677
               

               
Cow position:
               
chr27:5545594-5545312 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
24, 106
               

               
Conread position:
               
391-664
               

               
Cow position:
               
chr27:31210559-31210295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
22, 31
               

               
Conread position:
               
391-674
               

               
Cow position:
               
chr27:1981359-1981077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
20, 187
               

               
Conread position:
               
392-670
               

               
Cow position:
               
chr27:26437108-26437383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
32, 168
               

               
Conread position:
               
397-622
               

               
Cow position:
               
chr27:29603828-29603605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
26, 10
               

               
Conread position:
               
398-663
               

               
Cow position:
               
chr27:23994414-23994669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
399-652
               

               
Cow position:
               
chr27:12658346-12658596 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
121, 14
               

               
Conread position:
               
402-678
               

               
Cow position:
               
chr27:20719290-20719015 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
249, 185
               

               
Conread position:
               
403-651
               

               
Cow position:
               
chr27:27058406-27058647 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
403-668
               

               
Cow position:
               
chr27:30483297-30483568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
129, 18
               

               
Conread position:
               
410-629
               

               
Cow position:
               
chr27:24709546-24709334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
411-652
               

               
Cow position:
               
chr27:8790747-8790985 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
17, 159
               

               
Conread position:
               
413-681
               

               
Cow position:
               
chr27:7304613-7304882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
237, 122
               

               
Conread position:
               
415-684
               

               
Cow position:
               
chr27:19607669-19607933 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
10, 65
               

               
Conread position:
               
415-684
               

               
Cow position:
               
chr27:23169823-23170090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
167, 0
               

               
Conread position:
               
416-640
               

               
Cow position:
               
chr27:11993878-11994098 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
165, 0
               

               
Conread position:
               
416-650
               

               
Cow position:
               
chr27:18435147-18435371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
416-684
               

               
Cow position:
               
chr27:26245561-26245824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
241, 15
               

               
Conread position:
               
416-684
               

               
Cow position:
               
chr27:31386642-31386904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
44, 111
               

               
Conread position:
               
417-652
               

               
Cow position:
               
chr27:19933054-19932823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
417-656
               

               
Cow position:
               
chr27:19681939-19681701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
234, 164
               

               
Conread position:
               
417-677
               

               
Cow position:
               
chr27:13940570-13940820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
234, 145
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr27:7802058-7801801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
145, 0
               

               
Conread position:
               
418-579
               

               
Cow position:
               
chr27:30489424-30489585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
162
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
418-651
               

               
Cow position:
               
chr27:16512185-16512409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
418-655
               

               
Cow position:
               
chr27:30455980-30455747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-34
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
418-664
               

               
Cow position:
               
chr27:31170078-31170328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
148, 72
               

               
Conread position:
               
418-666
               

               
Cow position:
               
chr27:26793797-26794042 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
232, 128
               

               
Conread position:
               
420-677
               

               
Cow position:
               
chr27:23148150-23147895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
181, 162
               

               
Conread position:
               
421-611
               

               
Cow position:
               
chr27:13917422-13917226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
134, 123
               

               
Conread position:
               
421-671
               

               
Cow position:
               
chr27:27740308-27740554 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1.99993e-41
               

               
Alignm gaps (pig, cow):
               
95, 0
               

               
Conread position:
               
421-672
               

               
Cow position:
               
chr27:10323820-10323578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
233, 60
               

               
Conread position:
               
421-678
               

               
Cow position:
               
chr27:10404133-10404385 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
421-680
               

               
Cow position:
               
chr27:24303929-24303672 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
153, 24
               

               
Conread position:
               
422-678
               

               
Cow position:
               
chr27:29991465-29991726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
7.00649e-44
               

               
Alignm gaps (pig, cow):
               
154, 234
               

               
Conread position:
               
423-627
               

               
Cow position:
               
chr27:19485855-19485653 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
423-678
               

               
Cow position:
               
chr27:26173478-26173226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
36, 83
               

               
Conread position:
               
423-678
               

               
Cow position:
               
chr27:30414922-30415176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
227, 158
               

               
Conread position:
               
423-684
               

               
Cow position:
               
chr27:13254816-13255068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-31
               

               
Alignm gaps (pig, cow):
               
242, 146
               

               
Conread position:
               
424-656
               

               
Cow position:
               
chr27:12187142-12187371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
424-675
               

               
Cow position:
               
chr27:10598969-10598723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
424-684
               

               
Cow position:
               
chr27:9337997-9338258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
26, 93
               

               
Conread position:
               
425-615
               

               
Cow position:
               
chr27:15825742-15825929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
20, 0
               

               
Conread position:
               
431-627
               

               
Cow position:
               
chr27:24731066-24731256 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
28, 73
               

               
Conread position:
               
434-667
               

               
Cow position:
               
chr27:11323300-11323071 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
6e-32
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
434-675
               

               
Cow position:
               
chr27:17933896-17933657 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
142, 0
               

               
Conread position:
               
434-680
               

               
Cow position:
               
chr27:20653285-20653525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
434-680
               

               
Cow position:
               
chr27:24007438-24007199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
147, 0
               

               
Conread position:
               
435-666
               

               
Cow position:
               
chr27:26883287-26883518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
29, 46
               

               
Conread position:
               
436-675
               

               
Cow position:
               
chr27:26481227-26481465 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
4e-38
               

               
Alignm gaps (pig, cow):
               
172, 71
               

               
Conread position:
               
440-680
               

               
Cow position:
               
chr27:26400756-26400988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
7, 126
               

               
Conread position:
               
441-629
               

               
Cow position:
               
chr27:19452965-19452779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
133, 121
               

               
Conread position:
               
441-667
               

               
Cow position:
               
chr27:23527276-23527053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
209, 53
               

               
Conread position:
               
441-681
               

               
Cow position:
               
chr27:20327464-20327222 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
11, 136
               

               
Conread position:
               
441-684
               

               
Cow position:
               
chr27:6330607-6330362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
25, 130
               

               
Conread position:
               
442-651
               

               
Cow position:
               
chr27:3518467-3518260 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
442-681
               

               
Cow position:
               
chr27:7537646-7537407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
121, 140
               

               
Conread position:
               
442-684
               

               
Cow position:
               
chr27:17102858-17102626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
443-646
               

               
Cow position:
               
chr27:20591890-20591690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
444-648
               

               
Cow position:
               
chr27:31248653-31248845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
445-656
               

               
Cow position:
               
chr27:19557350-19557147 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
22, 121
               

               
Conread position:
               
447-679
               

               
Cow position:
               
chr27:18791552-18791779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
67, 136
               

               
Conread position:
               
448-671
               

               
Cow position:
               
chr27:23940992-23941214 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
201, 138
               

               
Conread position:
               
450-651
               

               
Cow position:
               
chr27:4413864-4414057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
26, 125
               

               
Conread position:
               
450-654
               

               
Cow position:
               
chr27:18688455-18688656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
9e-35
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
450-666
               

               
Cow position:
               
chr27:15237767-15237553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
201, 92
               

               
Conread position:
               
451-627
               

               
Cow position:
               
chr27:26236279-26236110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
451-652
               

               
Cow position:
               
chr27:26118453-26118254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
115, 0
               

               
Conread position:
               
451-673
               

               
Cow position:
               
chr27:13801762-13801542 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
131, 31
               

               
Conread position:
               
451-683
               

               
Cow position:
               
chr27:19483148-19483372 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
454-635
               

               
Cow position:
               
chr27:24755938-24755765 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
454-643
               

               
Cow position:
               
chr27:232504-232317 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
127, 0
               

               
Conread position:
               
454-665
               

               
Cow position:
               
chr27:27827901-27828112 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
107, 10
               

               
Conread position:
               
454-666
               

               
Cow position:
               
chr27:31498729-31498527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
105, 24
               

               
Conread position:
               
454-674
               

               
Cow position:
               
chr27:6282785-6282564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
9, 99
               

               
Conread position:
               
454-678
               

               
Cow position:
               
chr27:29308293-29308075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
3e-35
               

               
Alignm gaps (pig, cow):
               
109, 28
               

               
Conread position:
               
454-682
               

               
Cow position:
               
chr27:28015785-28016006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
455-612
               

               
Cow position:
               
chr27:27551006-27551159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
455-645
               

               
Cow position:
               
chr27:29160033-29160220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
8, 23
               

               
Conread position:
               
455-674
               

               
Cow position:
               
chr27:21677474-21677696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
6, 131
               

               
Conread position:
               
457-665
               

               
Cow position:
               
chr27:28254185-28253980 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
459-630
               

               
Cow position:
               
chr27:23060167-23060337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
7, 117
               

               
Conread position:
               
459-640
               

               
Cow position:
               
chr27:30996885-30997060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
24, 0
               

               
Conread position:
               
461-670
               

               
Cow position:
               
chr27:29249535-29249323 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
96, 140
               

               
Conread position:
               
461-675
               

               
Cow position:
               
chr27:11208611-11208823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
7e-33
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
462-643
               

               
Cow position:
               
chr27:26909649-26909822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
9e-25
               

               
Alignm gaps (pig, cow):
               
113, 0
               

               
Conread position:
               
462-656
               

               
Cow position:
               
chr27:20048576-20048388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
186, 105
               

               
Conread position:
               
462-669
               

               
Cow position:
               
chr27:6679432-6679638 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
1e-26
               

               
Alignm gaps (pig, cow):
               
143, 113
               

               
Conread position:
               
462-672
               

               
Cow position:
               
chr27:31157754-31157547 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
463-655
               

               
Cow position:
               
chr27:20127356-20127544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
463-656
               

               
Cow position:
               
chr27:13236493-13236687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
25, 104
               

               
Conread position:
               
463-670
               

               
Cow position:
               
chr27:31515608-31515814 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
4e-27
               

               
Alignm gaps (pig, cow):
               
132, 118
               

               
Conread position:
               
465-664
               

               
Cow position:
               
chr27:31157969-31157771 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
93, 121
               

               
Conread position:
               
465-672
               

               
Cow position:
               
chr27:9956492-9956698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-30
               

               
Alignm gaps (pig, cow):
               
194, 110
               

               
Conread position:
               
465-680
               

               
Cow position:
               
chr27:20266286-20266499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
4e-28
               

               
Alignm gaps (pig, cow):
               
200, 110
               

               
Conread position:
               
465-683
               

               
Cow position:
               
chr27:21202132-21201916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
466-683
               

               
Cow position:
               
chr27:9504491-9504282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-34
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
467-664
               

               
Cow position:
               
chr27:11464493-11464688 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
468-681
               

               
Cow position:
               
chr27:4544412-4544621 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
7e-22
               

               
Alignm gaps (pig, cow):
               
92, 76
               

               
Conread position:
               
469-668
               

               
Cow position:
               
chr27:24340029-24340225 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
34, 75
               

               
Conread position:
               
471-648
               

               
Cow position:
               
chr27:21951045-21951219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
472-640
               

               
Cow position:
               
chr27:23177380-23177543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
472-679
               

               
Cow position:
               
chr27:1810154-1810352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
208
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
472-679
               

               
Cow position:
               
chr27:11940294-11940512 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
98, 195
               

               
Conread position:
               
473-672
               

               
Cow position:
               
chr27:23232847-23232648 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
67, 109
               

               
Conread position:
               
478-659
               

               
Cow position:
               
chr27:2036646-2036476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
182
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
483-652
               

               
Cow position:
               
chr27:11145800-11145639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
3e-24
               

               
Alignm gaps (pig, cow):
               
63, 0
               

               
Conread position:
               
483-671
               

               
Cow position:
               
chr27:23070015-23069840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
484-667
               

               
Cow position:
               
chr27:17908339-17908514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
484-673
               

               
Cow position:
               
chr27:672588-672400 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
7, 34
               

               
Conread position:
               
484-676
               

               
Cow position:
               
chr27:10581453-10581266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
6e-21
               

               
Alignm gaps (pig, cow):
               
182, 27
               

               
Conread position:
               
484-684
               

               
Cow position:
               
chr27:22583667-22583469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
82, 98
               

               
Conread position:
               
489-672
               

               
Cow position:
               
chr27:12947879-12948060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-25
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
489-679
               

               
Cow position:
               
chr27:19779792-19779609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
86, 0
               

               
Conread position:
               
490-668
               

               
Cow position:
               
chr27:16504996-16505165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
491-665
               

               
Cow position:
               
chr27:19074109-19074281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
8e-24
               

               
Alignm gaps (pig, cow):
               
159, 34
               

               
Conread position:
               
491-665
               

               
Cow position:
               
chr27:19805783-19805951 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
28, 0
               

               
Conread position:
               
491-678
               

               
Cow position:
               
chr27:18813626-18813812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
170, 0
               

               
Conread position:
               
491-679
               

               
Cow position:
               
chr27:15350434-15350622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
64, 28
               

               
Conread position:
               
493-648
               

               
Cow position:
               
chr27:26154232-26154078 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
145, 88
               

               
Conread position:
               
494-674
               

               
Cow position:
               
chr27:29877563-29877740 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
496-652
               

               
Cow position:
               
chr27:21101382-21101535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
497-666
               

               
Cow position:
               
chr27:5480669-5480836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
7e-23
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
498-669
               

               
Cow position:
               
chr27:4486871-4487040 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
173
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
65, 43
               

               
Conread position:
               
499-672
               

               
Cow position:
               
chr27:21054365-21054194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
501-675
               

               
Cow position:
               
chr27:27012602-27012427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
5e-29
               

               
Alignm gaps (pig, cow):
               
148, 81
               

               
Conread position:
               
507-674
               

               
Cow position:
               
chr27:26467661-26467826 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
126
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
508-666
               

               
Cow position:
               
chr27:20825894-20826053 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
161
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
68, 151
               

               
Conread position:
               
509-675
               

               
Cow position:
               
chr27:22614756-22614590 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-25
               

               
Alignm gaps (pig, cow):
               
8, 15
               

               
Conread position:
               
519-665
               

               
Cow position:
               
chr27:6752066-6751921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
148
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
131, 63
               
Show alignments to all cow chromosomes.