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Cow genome map

           
Conread name:
           
Ss1.1-pigcb_1823.5
        

               
Conread position:
               
166-397
               

               
Cow position:
               
chr5:71158510-71158284 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
166-475
               

               
Cow position:
               
chr5:49362237-49361939 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
170-659
               

               
Cow position:
               
chr5:5855636-5856093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
472, 109
               

               
Conread position:
               
178-666
               

               
Cow position:
               
chr5:3242709-3242254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
431, 91
               

               
Conread position:
               
179-553
               

               
Cow position:
               
chr5:63992399-63992041 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
17, 101
               

               
Conread position:
               
180-437
               

               
Cow position:
               
chr5:6575821-6575574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
15, 35
               

               
Conread position:
               
180-684
               

               
Cow position:
               
chr5:5201682-5202165 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
511
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
19, 13
               

               
Conread position:
               
181-579
               

               
Cow position:
               
chr5:57736881-57737258 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
402
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
27, 89
               

               
Conread position:
               
182-502
               

               
Cow position:
               
chr5:27007667-27007977 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
252, 27
               

               
Conread position:
               
182-553
               

               
Cow position:
               
chr5:15426297-15426669 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
228, 37
               

               
Conread position:
               
182-553
               

               
Cow position:
               
chr5:29903753-29903392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
158, 58
               

               
Conread position:
               
182-574
               

               
Cow position:
               
chr5:60715588-60715216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
7, 87
               

               
Conread position:
               
182-652
               

               
Cow position:
               
chr5:48144022-48143564 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
67, 74
               

               
Conread position:
               
182-665
               

               
Cow position:
               
chr5:17999727-17999255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 114
               

               
Conread position:
               
183-437
               

               
Cow position:
               
chr5:51357735-51357486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
13, 143
               

               
Conread position:
               
185-677
               

               
Cow position:
               
chr5:35235937-35235434 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
296, 107
               

               
Conread position:
               
190-340
               

               
Cow position:
               
chr5:19560760-19560611 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
63, 23
               

               
Conread position:
               
191-326
               

               
Cow position:
               
chr5:19969254-19969119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
191-665
               

               
Cow position:
               
chr5:72895470-72895925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
168, 78
               

               
Conread position:
               
192-334
               

               
Cow position:
               
chr5:48238312-48238172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
143
               

               
Alignm identity:
               
107
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
192-446
               

               
Cow position:
               
chr5:49820921-49821164 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
97, 54
               

               
Conread position:
               
192-455
               

               
Cow position:
               
chr5:58460626-58460364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
67, 138
               

               
Conread position:
               
192-479
               

               
Cow position:
               
chr5:54405116-54404833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
289
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
231, 22
               

               
Conread position:
               
192-652
               

               
Cow position:
               
chr5:2309786-2309332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 192
               

               
Conread position:
               
192-682
               

               
Cow position:
               
chr5:38853138-38853609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
493
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
459, 182
               

               
Conread position:
               
193-573
               

               
Cow position:
               
chr5:21040194-21039832 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
151, 65
               

               
Conread position:
               
193-580
               

               
Cow position:
               
chr5:26094389-26094008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 9
               

               
Conread position:
               
194-329
               

               
Cow position:
               
chr5:25935731-25935864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
136
               

               
Alignm identity:
               
103
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
194-511
               

               
Cow position:
               
chr5:56467481-56467780 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
51, 89
               

               
Conread position:
               
194-558
               

               
Cow position:
               
chr5:62142451-62142812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 83
               

               
Conread position:
               
194-574
               

               
Cow position:
               
chr5:41546113-41545741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
57, 88
               

               
Conread position:
               
194-576
               

               
Cow position:
               
chr5:29771295-29771682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
220, 134
               

               
Conread position:
               
194-652
               

               
Cow position:
               
chr5:26262893-26262459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
398, 53
               

               
Conread position:
               
194-652
               

               
Cow position:
               
chr5:60952438-60952888 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 18
               

               
Conread position:
               
194-655
               

               
Cow position:
               
chr5:32394380-32394831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
11, 102
               

               
Conread position:
               
195-346
               

               
Cow position:
               
chr5:27011076-27011226 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
110
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
195-465
               

               
Cow position:
               
chr5:16184871-16185131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
195-474
               

               
Cow position:
               
chr5:3281086-3280820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
214, 19
               

               
Conread position:
               
195-579
               

               
Cow position:
               
chr5:58855886-58856257 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
195-652
               

               
Cow position:
               
chr5:40831095-40831544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
141, 57
               

               
Conread position:
               
195-672
               

               
Cow position:
               
chr5:65752638-65753107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
147, 96
               

               
Conread position:
               
197-313
               

               
Cow position:
               
chr5:35125800-35125914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
117
               

               
Alignm identity:
               
94
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
197-334
               

               
Cow position:
               
chr5:14703184-14703046 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
139
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
197-338
               

               
Cow position:
               
chr5:67212162-67212303 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
142
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
197-342
               

               
Cow position:
               
chr5:26133290-26133149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
108
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
197-342
               

               
Cow position:
               
chr5:36479757-36479615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
197-345
               

               
Cow position:
               
chr5:12803279-12803425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
149
               

               
Alignm identity:
               
109
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
197-350
               

               
Cow position:
               
chr5:15412476-15412629 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
197-351
               

               
Cow position:
               
chr5:61455538-61455690 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
155
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
143, 0
               

               
Conread position:
               
197-364
               

               
Cow position:
               
chr5:2851098-2851262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
197-368
               

               
Cow position:
               
chr5:54530766-54530931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
172
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
197-373
               

               
Cow position:
               
chr5:50729279-50729453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
197-373
               

               
Cow position:
               
chr5:63917626-63917457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
197-384
               

               
Cow position:
               
chr5:14415557-14415743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
98, 13
               

               
Conread position:
               
197-385
               

               
Cow position:
               
chr5:70102024-70101842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
190
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
128, 15
               

               
Conread position:
               
197-391
               

               
Cow position:
               
chr5:37366681-37366872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
197-400
               

               
Cow position:
               
chr5:10789894-10789697 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
197-400
               

               
Cow position:
               
chr5:63388578-63388774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
197-401
               

               
Cow position:
               
chr5:9024475-9024285 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
197-411
               

               
Cow position:
               
chr5:35145136-35145340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
197-412
               

               
Cow position:
               
chr5:32963845-32963639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
197-414
               

               
Cow position:
               
chr5:30816499-30816712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
197-428
               

               
Cow position:
               
chr5:27690275-27690054 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
197-432
               

               
Cow position:
               
chr5:28324129-28324365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
58, 130
               

               
Conread position:
               
197-437
               

               
Cow position:
               
chr5:14420561-14420325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
219, 156
               

               
Conread position:
               
197-437
               

               
Cow position:
               
chr5:42747942-42748173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
16, 0
               

               
Conread position:
               
197-447
               

               
Cow position:
               
chr5:65924915-65924664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
253
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
139, 59
               

               
Conread position:
               
197-448
               

               
Cow position:
               
chr5:9859934-9859685 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
90, 16
               

               
Conread position:
               
197-451
               

               
Cow position:
               
chr5:6086778-6086531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
197-451
               

               
Cow position:
               
chr5:19470399-19470161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
197-455
               

               
Cow position:
               
chr5:30639066-30638830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
197-456
               

               
Cow position:
               
chr5:59298175-59297928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
89, 0
               

               
Conread position:
               
197-458
               

               
Cow position:
               
chr5:58005028-58005282 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
128, 17
               

               
Conread position:
               
197-460
               

               
Cow position:
               
chr5:23856378-23856122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
139, 71
               

               
Conread position:
               
197-460
               

               
Cow position:
               
chr5:63840362-63840110 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
213, 108
               

               
Conread position:
               
197-461
               

               
Cow position:
               
chr5:42677018-42677271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
90, 112
               

               
Conread position:
               
197-463
               

               
Cow position:
               
chr5:56135185-56134924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
222, 85
               

               
Conread position:
               
197-463
               

               
Cow position:
               
chr5:72310498-72310744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
197-467
               

               
Cow position:
               
chr5:21944165-21944443 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
75, 122
               

               
Conread position:
               
197-467
               

               
Cow position:
               
chr5:47888931-47888666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
197-468
               

               
Cow position:
               
chr5:37714121-37713848 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
68, 134
               

               
Conread position:
               
197-468
               

               
Cow position:
               
chr5:59443467-59443204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
223, 20
               

               
Conread position:
               
197-469
               

               
Cow position:
               
chr5:41523009-41522755 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
197-469
               

               
Cow position:
               
chr5:60126157-60126420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
274
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
222, 77
               

               
Conread position:
               
197-473
               

               
Cow position:
               
chr5:48757728-48757991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
278
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
215, 59
               

               
Conread position:
               
197-473
               

               
Cow position:
               
chr5:62826969-62826701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
227, 13
               

               
Conread position:
               
197-474
               

               
Cow position:
               
chr5:43474631-43474898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
260, 77
               

               
Conread position:
               
197-475
               

               
Cow position:
               
chr5:1766561-1766296 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
13, 86
               

               
Conread position:
               
197-475
               

               
Cow position:
               
chr5:12709670-12709942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
197-475
               

               
Cow position:
               
chr5:51502796-51503061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
197-478
               

               
Cow position:
               
chr5:27403460-27403173 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
288
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
197-479
               

               
Cow position:
               
chr5:41531305-41531028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
194
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
8, 128
               

               
Conread position:
               
197-479
               

               
Cow position:
               
chr5:42667604-42667330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
131, 15
               

               
Conread position:
               
197-479
               

               
Cow position:
               
chr5:64823529-64823254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
217, 103
               

               
Conread position:
               
197-482
               

               
Cow position:
               
chr5:32956306-32956034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
197-495
               

               
Cow position:
               
chr5:34885372-34885090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
197-495
               

               
Cow position:
               
chr5:56820476-56820188 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
44, 0
               

               
Conread position:
               
197-502
               

               
Cow position:
               
chr5:28926401-28926100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
124, 22
               

               
Conread position:
               
197-503
               

               
Cow position:
               
chr5:42744581-42744867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
197-504
               

               
Cow position:
               
chr5:34638669-34638966 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
155, 84
               

               
Conread position:
               
197-504
               

               
Cow position:
               
chr5:46122565-46122271 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
197-511
               

               
Cow position:
               
chr5:72172807-72173116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
134, 148
               

               
Conread position:
               
197-512
               

               
Cow position:
               
chr5:741165-740850 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
324
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
16, 101
               

               
Conread position:
               
197-512
               

               
Cow position:
               
chr5:39442076-39442388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
9, 123
               

               
Conread position:
               
197-512
               

               
Cow position:
               
chr5:73079996-73080295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
230, 44
               

               
Conread position:
               
197-514
               

               
Cow position:
               
chr5:58144821-58144507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
321
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
13, 87
               

               
Conread position:
               
197-521
               

               
Cow position:
               
chr5:37425527-37425841 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
215, 13
               

               
Conread position:
               
197-521
               

               
Cow position:
               
chr5:43738165-43737864 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
197-521
               

               
Cow position:
               
chr5:58793831-58793508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
331
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
157, 108
               

               
Conread position:
               
197-521
               

               
Cow position:
               
chr5:61839972-61840287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
329
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
142, 21
               

               
Conread position:
               
197-524
               

               
Cow position:
               
chr5:25231230-25230910 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
335
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
11, 134
               

               
Conread position:
               
197-533
               

               
Cow position:
               
chr5:31640211-31640536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
190, 129
               

               
Conread position:
               
197-538
               

               
Cow position:
               
chr5:31480937-31481264 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
13, 83
               

               
Conread position:
               
197-543
               

               
Cow position:
               
chr5:50637614-50637942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
117, 15
               

               
Conread position:
               
197-545
               

               
Cow position:
               
chr5:65601244-65601579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
77, 0
               

               
Conread position:
               
197-545
               

               
Cow position:
               
chr5:69516923-69516585 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
197-547
               

               
Cow position:
               
chr5:61488327-61487988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
197-551
               

               
Cow position:
               
chr5:26377883-26377538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
229, 72
               

               
Conread position:
               
197-552
               

               
Cow position:
               
chr5:15598450-15598108 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
104, 0
               

               
Conread position:
               
197-552
               

               
Cow position:
               
chr5:57935330-57934978 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 129
               

               
Conread position:
               
197-557
               

               
Cow position:
               
chr5:52000003-52000353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
197-558
               

               
Cow position:
               
chr5:4218661-4218993 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
235
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
64, 0
               

               
Conread position:
               
197-558
               

               
Cow position:
               
chr5:6528464-6528821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
371
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
198, 89
               

               
Conread position:
               
197-560
               

               
Cow position:
               
chr5:16025677-16025330 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
231, 128
               

               
Conread position:
               
197-560
               

               
Cow position:
               
chr5:27411606-27411263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
56, 30
               

               
Conread position:
               
197-560
               

               
Cow position:
               
chr5:72007069-72006727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
105, 0
               

               
Conread position:
               
197-561
               

               
Cow position:
               
chr5:34442008-34441641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
56, 68
               

               
Conread position:
               
197-561
               

               
Cow position:
               
chr5:35826374-35826741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
90, 137
               

               
Conread position:
               
197-565
               

               
Cow position:
               
chr5:59326044-59325698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
165, 17
               

               
Conread position:
               
197-565
               

               
Cow position:
               
chr5:63964389-63964025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
303, 190
               

               
Conread position:
               
197-566
               

               
Cow position:
               
chr5:5111293-5110925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
316, 113
               

               
Conread position:
               
197-566
               

               
Cow position:
               
chr5:65887230-65886867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
128, 16
               

               
Conread position:
               
197-566
               

               
Cow position:
               
chr5:75437113-75436745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
139, 223
               

               
Conread position:
               
197-567
               

               
Cow position:
               
chr5:7498176-7497813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
206, 129
               

               
Conread position:
               
197-572
               

               
Cow position:
               
chr5:54350577-54350211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 82
               

               
Conread position:
               
197-573
               

               
Cow position:
               
chr5:43992109-43992475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
228, 43
               

               
Conread position:
               
197-574
               

               
Cow position:
               
chr5:26990177-26990538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
62, 68
               

               
Conread position:
               
197-574
               

               
Cow position:
               
chr5:37646768-37646390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 115
               

               
Conread position:
               
197-575
               

               
Cow position:
               
chr5:40357086-40356705 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
218, 53
               

               
Conread position:
               
197-578
               

               
Cow position:
               
chr5:34887414-34887039 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
53, 27
               

               
Conread position:
               
197-578
               

               
Cow position:
               
chr5:66338868-66339231 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
227, 17
               

               
Conread position:
               
197-579
               

               
Cow position:
               
chr5:9090239-9089871 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
197-579
               

               
Cow position:
               
chr5:34528345-34528702 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
108, 80
               

               
Conread position:
               
197-579
               

               
Cow position:
               
chr5:43929950-43929579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
187, 95
               

               
Conread position:
               
197-579
               

               
Cow position:
               
chr5:44752526-44752150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
229, 16
               

               
Conread position:
               
197-579
               

               
Cow position:
               
chr5:64139347-64139720 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
356, 15
               

               
Conread position:
               
197-580
               

               
Cow position:
               
chr5:51151578-51151199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
267, 11
               

               
Conread position:
               
197-585
               

               
Cow position:
               
chr5:39299312-39299693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
293, 11
               

               
Conread position:
               
197-585
               

               
Cow position:
               
chr5:72564546-72564927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
215, 16
               

               
Conread position:
               
197-586
               

               
Cow position:
               
chr5:4032205-4031822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 59
               

               
Conread position:
               
197-591
               

               
Cow position:
               
chr5:33661638-33662013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
155, 0
               

               
Conread position:
               
197-591
               

               
Cow position:
               
chr5:39094337-39094718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
351, 64
               

               
Conread position:
               
197-591
               

               
Cow position:
               
chr5:50533600-50533217 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
399
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
10, 77
               

               
Conread position:
               
197-597
               

               
Cow position:
               
chr5:27306102-27306476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
258, 93
               

               
Conread position:
               
197-603
               

               
Cow position:
               
chr5:42777548-42777926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
356, 104
               

               
Conread position:
               
197-613
               

               
Cow position:
               
chr5:28247960-28248362 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
418
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
215, 89
               

               
Conread position:
               
197-615
               

               
Cow position:
               
chr5:55068500-55068895 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
421
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
13, 48
               

               
Conread position:
               
197-622
               

               
Cow position:
               
chr5:68871976-68872391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 38
               

               
Conread position:
               
197-626
               

               
Cow position:
               
chr5:45226040-45225620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 45
               

               
Conread position:
               
197-627
               

               
Cow position:
               
chr5:20554965-20554563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
15, 0
               

               
Conread position:
               
197-627
               

               
Cow position:
               
chr5:47704351-47703924 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 205
               

               
Conread position:
               
197-628
               

               
Cow position:
               
chr5:64137035-64137460 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
238, 76
               

               
Conread position:
               
197-629
               

               
Cow position:
               
chr5:4507177-4506760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
203, 0
               

               
Conread position:
               
197-629
               

               
Cow position:
               
chr5:29353345-29352929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
218, 15
               

               
Conread position:
               
197-629
               

               
Cow position:
               
chr5:37645857-37646278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
440
               

               
Alignm identity:
               
280
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
228, 106
               

               
Conread position:
               
197-629
               

               
Cow position:
               
chr5:44054254-44053843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
360, 117
               

               
Conread position:
               
197-629
               

               
Cow position:
               
chr5:64524096-64523661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
101, 30
               

               
Conread position:
               
197-639
               

               
Cow position:
               
chr5:33414621-33414195 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 14
               

               
Conread position:
               
197-639
               

               
Cow position:
               
chr5:50483078-50482645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
265, 94
               

               
Conread position:
               
197-640
               

               
Cow position:
               
chr5:65765328-65764914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
228, 52
               

               
Conread position:
               
197-641
               

               
Cow position:
               
chr5:37064877-37065314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
253, 129
               

               
Conread position:
               
197-641
               

               
Cow position:
               
chr5:55942614-55942162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
138, 90
               

               
Conread position:
               
197-643
               

               
Cow position:
               
chr5:34049893-34050325 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 91
               

               
Conread position:
               
197-643
               

               
Cow position:
               
chr5:56070637-56071075 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 17
               

               
Conread position:
               
197-646
               

               
Cow position:
               
chr5:67932677-67932246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
364, 15
               

               
Conread position:
               
197-647
               

               
Cow position:
               
chr5:20127838-20128275 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
147, 43
               

               
Conread position:
               
197-647
               

               
Cow position:
               
chr5:68604643-68605084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
187, 17
               

               
Conread position:
               
197-648
               

               
Cow position:
               
chr5:28330548-28330119 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
299, 82
               

               
Conread position:
               
197-648
               

               
Cow position:
               
chr5:44994253-44993817 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
211, 13
               

               
Conread position:
               
197-650
               

               
Cow position:
               
chr5:44848233-44847803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
135, 67
               

               
Conread position:
               
197-650
               

               
Cow position:
               
chr5:53835498-53835945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
234, 72
               

               
Conread position:
               
197-651
               

               
Cow position:
               
chr5:3771630-3772067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 85
               

               
Conread position:
               
197-651
               

               
Cow position:
               
chr5:19278908-19278478 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
265, 52
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr5:1105087-1104649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
356, 166
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr5:3281615-3282063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
221, 154
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr5:5257513-5257061 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
79, 126
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr5:16085016-16084557 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
205, 129
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr5:17087246-17086791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
7, 71
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr5:21524948-21525386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
325, 206
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr5:21617239-21617681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 84
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr5:30302682-30303107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
147, 22
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr5:31097021-31096576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
8, 132
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr5:31469799-31469365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
1.96182e-44
               

               
Alignm gaps (pig, cow):
               
27, 0
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr5:35684718-35685159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
218, 128
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr5:43858644-43858192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
209, 55
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr5:64321532-64321988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
75, 129
               

               
Conread position:
               
197-652
               

               
Cow position:
               
chr5:65941470-65941024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
209, 128
               

               
Conread position:
               
197-653
               

               
Cow position:
               
chr5:12323017-12322584 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
155, 72
               

               
Conread position:
               
197-655
               

               
Cow position:
               
chr5:25495554-25495122 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
169, 58
               

               
Conread position:
               
197-655
               

               
Cow position:
               
chr5:32339191-32338732 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
93, 15
               

               
Conread position:
               
197-656
               

               
Cow position:
               
chr5:16938224-16937803 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
454, 69
               

               
Conread position:
               
197-656
               

               
Cow position:
               
chr5:42063987-42064437 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 17
               

               
Conread position:
               
197-656
               

               
Cow position:
               
chr5:49685497-49685037 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
64, 104
               

               
Conread position:
               
197-656
               

               
Cow position:
               
chr5:53055769-53055328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
239, 43
               

               
Conread position:
               
197-656
               

               
Cow position:
               
chr5:53855488-53855949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
140, 24
               

               
Conread position:
               
197-656
               

               
Cow position:
               
chr5:61725754-61726187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
17, 0
               

               
Conread position:
               
197-659
               

               
Cow position:
               
chr5:4551916-4552368 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
129, 17
               

               
Conread position:
               
197-659
               

               
Cow position:
               
chr5:30253529-30253973 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
187, 15
               

               
Conread position:
               
197-659
               

               
Cow position:
               
chr5:45845911-45845457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 15
               

               
Conread position:
               
197-663
               

               
Cow position:
               
chr5:15478897-15479365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 80
               

               
Conread position:
               
197-664
               

               
Cow position:
               
chr5:22243001-22242536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
121, 25
               

               
Conread position:
               
197-664
               

               
Cow position:
               
chr5:24348895-24349355 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 82
               

               
Conread position:
               
197-664
               

               
Cow position:
               
chr5:56028746-56028308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
162, 15
               

               
Conread position:
               
197-665
               

               
Cow position:
               
chr5:39936887-39937354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
134, 15
               

               
Conread position:
               
197-665
               

               
Cow position:
               
chr5:41164872-41165322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
78, 96
               

               
Conread position:
               
197-665
               

               
Cow position:
               
chr5:42845816-42845358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
130, 20
               

               
Conread position:
               
197-665
               

               
Cow position:
               
chr5:62107711-62107244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
57, 67
               

               
Conread position:
               
197-666
               

               
Cow position:
               
chr5:24996440-24995979 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
356, 32
               

               
Conread position:
               
197-666
               

               
Cow position:
               
chr5:47317184-47316737 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
360, 12
               

               
Conread position:
               
197-666
               

               
Cow position:
               
chr5:50722834-50723288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
470
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 0
               

               
Conread position:
               
197-666
               

               
Cow position:
               
chr5:52165398-52164934 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
377, 15
               

               
Conread position:
               
197-667
               

               
Cow position:
               
chr5:32975767-32975320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
197-668
               

               
Cow position:
               
chr5:21828648-21829106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
473
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
222, 105
               

               
Conread position:
               
197-668
               

               
Cow position:
               
chr5:41303307-41302830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
215, 116
               

               
Conread position:
               
197-669
               

               
Cow position:
               
chr5:14314306-14314759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
225, 15
               

               
Conread position:
               
197-669
               

               
Cow position:
               
chr5:64176337-64175884 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
455, 128
               

               
Conread position:
               
197-670
               

               
Cow position:
               
chr5:23140789-23140341 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
451, 77
               

               
Conread position:
               
197-670
               

               
Cow position:
               
chr5:26097081-26097534 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
175, 11
               

               
Conread position:
               
197-670
               

               
Cow position:
               
chr5:35208045-35208509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
95, 130
               

               
Conread position:
               
197-670
               

               
Cow position:
               
chr5:40109285-40109728 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
222, 52
               

               
Conread position:
               
197-671
               

               
Cow position:
               
chr5:18573954-18574426 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
131, 80
               

               
Conread position:
               
197-672
               

               
Cow position:
               
chr5:20779596-20779152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
53, 11
               

               
Conread position:
               
197-673
               

               
Cow position:
               
chr5:14550802-14550332 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
447, 143
               

               
Conread position:
               
197-674
               

               
Cow position:
               
chr5:39447748-39447278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 83
               

               
Conread position:
               
197-675
               

               
Cow position:
               
chr5:47871267-47870804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
154, 257
               

               
Conread position:
               
197-676
               

               
Cow position:
               
chr5:57074551-57074086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
158, 95
               

               
Conread position:
               
197-677
               

               
Cow position:
               
chr5:5938108-5938576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
186, 94
               

               
Conread position:
               
197-677
               

               
Cow position:
               
chr5:18702429-18701972 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
117, 172
               

               
Conread position:
               
197-677
               

               
Cow position:
               
chr5:32153532-32153060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
375, 89
               

               
Conread position:
               
197-677
               

               
Cow position:
               
chr5:74643877-74643428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
338, 15
               

               
Conread position:
               
197-679
               

               
Cow position:
               
chr5:27179438-27179915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
495
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
49, 73
               

               
Conread position:
               
197-679
               

               
Cow position:
               
chr5:30844895-30845357 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 15
               

               
Conread position:
               
197-679
               

               
Cow position:
               
chr5:60210356-60209897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
484
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
228, 114
               

               
Conread position:
               
197-680
               

               
Cow position:
               
chr5:46052020-46051546 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
119, 13
               

               
Conread position:
               
197-681
               

               
Cow position:
               
chr5:12873528-12874006 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
211, 44
               

               
Conread position:
               
197-681
               

               
Cow position:
               
chr5:22737889-22738352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
266, 50
               

               
Conread position:
               
197-681
               

               
Cow position:
               
chr5:40889500-40889044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
485
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
197-681
               

               
Cow position:
               
chr5:58519615-58519161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
131, 47
               

               
Conread position:
               
197-682
               

               
Cow position:
               
chr5:61600196-61600663 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
487
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
454, 203
               

               
Conread position:
               
197-682
               

               
Cow position:
               
chr5:63987663-63987186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
496
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
42, 17
               

               
Conread position:
               
197-683
               

               
Cow position:
               
chr5:59144-58670 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
87, 15
               

               
Conread position:
               
197-684
               

               
Cow position:
               
chr5:12149330-12149813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
501
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
204, 16
               

               
Conread position:
               
197-684
               

               
Cow position:
               
chr5:36868529-36868989 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
433, 84
               

               
Conread position:
               
197-684
               

               
Cow position:
               
chr5:37942009-37941548 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
489
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
470, 84
               

               
Conread position:
               
198-393
               

               
Cow position:
               
chr5:2332729-2332538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
198-397
               

               
Cow position:
               
chr5:61656391-61656582 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
200
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
198-438
               

               
Cow position:
               
chr5:56433586-56433823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
80, 11
               

               
Conread position:
               
198-452
               

               
Cow position:
               
chr5:64392939-64393186 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
198-474
               

               
Cow position:
               
chr5:8024407-8024141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
198-560
               

               
Cow position:
               
chr5:46323027-46322665 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
172, 94
               

               
Conread position:
               
198-563
               

               
Cow position:
               
chr5:34463800-34463439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
62, 14
               

               
Conread position:
               
198-572
               

               
Cow position:
               
chr5:67243709-67244068 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
6, 128
               

               
Conread position:
               
198-577
               

               
Cow position:
               
chr5:37190311-37189942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
198-579
               

               
Cow position:
               
chr5:46510083-46509707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
12, 95
               

               
Conread position:
               
198-652
               

               
Cow position:
               
chr5:37255571-37255107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
298
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
80, 216
               

               
Conread position:
               
198-652
               

               
Cow position:
               
chr5:40152260-40152713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
229, 100
               

               
Conread position:
               
198-665
               

               
Cow position:
               
chr5:17063309-17062843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
109, 68
               

               
Conread position:
               
198-672
               

               
Cow position:
               
chr5:44796933-44796489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
332, 14
               

               
Conread position:
               
198-677
               

               
Cow position:
               
chr5:74858358-74858835 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
491
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
219, 83
               

               
Conread position:
               
198-683
               

               
Cow position:
               
chr5:34506141-34505666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
488
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 93
               

               
Conread position:
               
199-324
               

               
Cow position:
               
chr5:22102527-22102405 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
126
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
199-367
               

               
Cow position:
               
chr5:32087935-32087767 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
199-377
               

               
Cow position:
               
chr5:56201335-56201159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
199-399
               

               
Cow position:
               
chr5:60519952-60520141 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
65, 0
               

               
Conread position:
               
199-427
               

               
Cow position:
               
chr5:26561938-26562161 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
8, 59
               

               
Conread position:
               
199-478
               

               
Cow position:
               
chr5:3627382-3627096 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
60, 139
               

               
Conread position:
               
199-478
               

               
Cow position:
               
chr5:28927807-28927529 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
220, 127
               

               
Conread position:
               
199-479
               

               
Cow position:
               
chr5:27154808-27155073 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
156, 56
               

               
Conread position:
               
199-498
               

               
Cow position:
               
chr5:54713952-54713656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
214
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
10, 93
               

               
Conread position:
               
199-500
               

               
Cow position:
               
chr5:13691790-13691489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
303
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
22, 201
               

               
Conread position:
               
199-504
               

               
Cow position:
               
chr5:47313259-47313555 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
199
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
199-515
               

               
Cow position:
               
chr5:66815790-66815479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
120, 59
               

               
Conread position:
               
199-539
               

               
Cow position:
               
chr5:43990179-43990514 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
120, 0
               

               
Conread position:
               
199-542
               

               
Cow position:
               
chr5:32697027-32696703 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
56, 0
               

               
Conread position:
               
199-550
               

               
Cow position:
               
chr5:27353450-27353109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
79, 61
               

               
Conread position:
               
199-558
               

               
Cow position:
               
chr5:65933142-65932807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
199-560
               

               
Cow position:
               
chr5:27419936-27419591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
14, 91
               

               
Conread position:
               
199-560
               

               
Cow position:
               
chr5:62172204-62172549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
331, 70
               

               
Conread position:
               
199-565
               

               
Cow position:
               
chr5:28302954-28302600 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
211, 78
               

               
Conread position:
               
199-570
               

               
Cow position:
               
chr5:56523960-56524322 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
202, 13
               

               
Conread position:
               
199-580
               

               
Cow position:
               
chr5:28229943-28230324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
154, 80
               

               
Conread position:
               
199-620
               

               
Cow position:
               
chr5:45170148-45170552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
422
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
153, 0
               

               
Conread position:
               
199-647
               

               
Cow position:
               
chr5:65776600-65776156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
343, 127
               

               
Conread position:
               
199-648
               

               
Cow position:
               
chr5:29827839-29828270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
264, 77
               

               
Conread position:
               
199-664
               

               
Cow position:
               
chr5:11229888-11229433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 121
               

               
Conread position:
               
199-667
               

               
Cow position:
               
chr5:11668392-11667943 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
176, 13
               

               
Conread position:
               
199-668
               

               
Cow position:
               
chr5:48867964-48867504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
330, 54
               

               
Conread position:
               
199-672
               

               
Cow position:
               
chr5:16893990-16893532 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
213, 126
               

               
Conread position:
               
199-675
               

               
Cow position:
               
chr5:61576325-61576797 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
191, 79
               

               
Conread position:
               
199-679
               

               
Cow position:
               
chr5:1247062-1247516 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
212, 92
               

               
Conread position:
               
200-367
               

               
Cow position:
               
chr5:40097571-40097404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
63, 38
               

               
Conread position:
               
200-475
               

               
Cow position:
               
chr5:3649677-3649404 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
17, 69
               

               
Conread position:
               
200-494
               

               
Cow position:
               
chr5:28456625-28456333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
26, 148
               

               
Conread position:
               
200-494
               

               
Cow position:
               
chr5:28459927-28459634 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
26, 149
               

               
Conread position:
               
200-553
               

               
Cow position:
               
chr5:45803847-45804191 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
236, 64
               

               
Conread position:
               
200-573
               

               
Cow position:
               
chr5:55176674-55177036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
228, 12
               

               
Conread position:
               
200-584
               

               
Cow position:
               
chr5:3204622-3204988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
139, 45
               

               
Conread position:
               
200-629
               

               
Cow position:
               
chr5:6504093-6503673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
433
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
392, 91
               

               
Conread position:
               
200-629
               

               
Cow position:
               
chr5:45705834-45706239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
430
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
69, 0
               

               
Conread position:
               
200-648
               

               
Cow position:
               
chr5:54311120-54311578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
183, 35
               

               
Conread position:
               
200-652
               

               
Cow position:
               
chr5:35969329-35969766 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
395, 81
               

               
Conread position:
               
200-670
               

               
Cow position:
               
chr5:55967096-55966625 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
373, 125
               

               
Conread position:
               
200-671
               

               
Cow position:
               
chr5:30276478-30276931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 130
               

               
Conread position:
               
200-677
               

               
Cow position:
               
chr5:4280251-4280696 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
263, 12
               

               
Conread position:
               
200-677
               

               
Cow position:
               
chr5:69337617-69338063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
480
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
167, 9
               

               
Conread position:
               
201-412
               

               
Cow position:
               
chr5:45036810-45037013 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
201-413
               

               
Cow position:
               
chr5:57271478-57271272 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
5, 80
               

               
Conread position:
               
201-531
               

               
Cow position:
               
chr5:68265176-68264849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
189, 152
               

               
Conread position:
               
201-545
               

               
Cow position:
               
chr5:57706703-57707044 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
212, 139
               

               
Conread position:
               
201-652
               

               
Cow position:
               
chr5:26467408-26467853 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
218, 19
               

               
Conread position:
               
201-652
               

               
Cow position:
               
chr5:47601605-47602034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
301
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
201-652
               

               
Cow position:
               
chr5:48154685-48154237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
461
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
156, 53
               

               
Conread position:
               
201-666
               

               
Cow position:
               
chr5:6839291-6838838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
260, 126
               

               
Conread position:
               
201-679
               

               
Cow position:
               
chr5:55430422-55430912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
498
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
72, 128
               

               
Conread position:
               
202-553
               

               
Cow position:
               
chr5:50821578-50821914 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
202-586
               

               
Cow position:
               
chr5:4710353-4709990 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
71, 11
               

               
Conread position:
               
202-596
               

               
Cow position:
               
chr5:47547928-47547552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
202-629
               

               
Cow position:
               
chr5:33080999-33080606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
429
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
206, 15
               

               
Conread position:
               
202-629
               

               
Cow position:
               
chr5:48828937-48829358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
41, 152
               

               
Conread position:
               
202-681
               

               
Cow position:
               
chr5:6572540-6572987 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
483
               

               
Alignm identity:
               
303
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
161, 126
               

               
Conread position:
               
203-329
               

               
Cow position:
               
chr5:17631080-17630954 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
127
               

               
Alignm identity:
               
98
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
203-410
               

               
Cow position:
               
chr5:15882686-15882476 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
51, 64
               

               
Conread position:
               
203-472
               

               
Cow position:
               
chr5:40039981-40039718 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
216, 89
               

               
Conread position:
               
203-505
               

               
Cow position:
               
chr5:63185464-63185171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
305
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
214, 122
               

               
Conread position:
               
203-512
               

               
Cow position:
               
chr5:34184009-34184314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
117, 202
               

               
Conread position:
               
203-560
               

               
Cow position:
               
chr5:18898773-18899111 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
358
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
203-614
               

               
Cow position:
               
chr5:71494606-71495010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
28, 23
               

               
Conread position:
               
203-640
               

               
Cow position:
               
chr5:57327579-57328011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
42, 128
               

               
Conread position:
               
203-652
               

               
Cow position:
               
chr5:47756558-47756998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
133, 155
               

               
Conread position:
               
203-667
               

               
Cow position:
               
chr5:55756650-55756172 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 395
               

               
Conread position:
               
203-674
               

               
Cow position:
               
chr5:62870244-62869811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
221, 10
               

               
Conread position:
               
204-475
               

               
Cow position:
               
chr5:29212739-29212997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
189
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
188, 68
               

               
Conread position:
               
204-520
               

               
Cow position:
               
chr5:16508886-16509204 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
96, 40
               

               
Conread position:
               
204-543
               

               
Cow position:
               
chr5:52645284-52644959 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
47, 8
               

               
Conread position:
               
204-677
               

               
Cow position:
               
chr5:11427451-11426982 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
481
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
119, 125
               

               
Conread position:
               
205-475
               

               
Cow position:
               
chr5:10261448-10261180 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
5, 150
               

               
Conread position:
               
205-512
               

               
Cow position:
               
chr5:39695444-39695742 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
47, 27
               

               
Conread position:
               
205-514
               

               
Cow position:
               
chr5:17027886-17028187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
311
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
49, 55
               

               
Conread position:
               
205-515
               

               
Cow position:
               
chr5:50975677-50975995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
323
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
49, 123
               

               
Conread position:
               
205-565
               

               
Cow position:
               
chr5:6045079-6045439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
209, 123
               

               
Conread position:
               
205-574
               

               
Cow position:
               
chr5:458273-458640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
124, 70
               

               
Conread position:
               
205-577
               

               
Cow position:
               
chr5:8821220-8820857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
206, 120
               

               
Conread position:
               
206-401
               

               
Cow position:
               
chr5:29504902-29505090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
46, 59
               

               
Conread position:
               
206-650
               

               
Cow position:
               
chr5:51053855-51053424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
311
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
273, 71
               

               
Conread position:
               
209-460
               

               
Cow position:
               
chr5:8994770-8994527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
210, 68
               

               
Conread position:
               
209-580
               

               
Cow position:
               
chr5:8163027-8162661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
63, 11
               

               
Conread position:
               
210-549
               

               
Cow position:
               
chr5:65588504-65588827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
341
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
332, 69
               

               
Conread position:
               
212-504
               

               
Cow position:
               
chr5:9390334-9390635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
212-586
               

               
Cow position:
               
chr5:23169020-23168662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
377
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
207, 59
               

               
Conread position:
               
212-646
               

               
Cow position:
               
chr5:45409124-45409545 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
437
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
24, 72
               

               
Conread position:
               
212-666
               

               
Cow position:
               
chr5:72903429-72903001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
132, 67
               

               
Conread position:
               
213-428
               

               
Cow position:
               
chr5:55821166-55821380 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
120, 78
               

               
Conread position:
               
213-541
               

               
Cow position:
               
chr5:56518410-56518103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
330
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
131, 56
               

               
Conread position:
               
213-553
               

               
Cow position:
               
chr5:64758964-64758636 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
344
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
167, 42
               

               
Conread position:
               
213-560
               

               
Cow position:
               
chr5:360147-359801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
230, 66
               

               
Conread position:
               
213-577
               

               
Cow position:
               
chr5:54086335-54086693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
114, 169
               

               
Conread position:
               
213-683
               

               
Cow position:
               
chr5:26370498-26370945 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
478
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
60, 27
               

               
Conread position:
               
214-492
               

               
Cow position:
               
chr5:2500388-2500109 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
116, 77
               

               
Conread position:
               
214-680
               

               
Cow position:
               
chr5:17371900-17371442 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2.00386e-43
               

               
Alignm gaps (pig, cow):
               
180, 26
               

               
Conread position:
               
215-652
               

               
Cow position:
               
chr5:14904271-14903838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
7.00649e-45
               

               
Alignm gaps (pig, cow):
               
129, 12
               

               
Conread position:
               
215-680
               

               
Cow position:
               
chr5:50943352-50942903 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
129, 110
               

               
Conread position:
               
216-565
               

               
Cow position:
               
chr5:69731320-69731643 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
194, 54
               

               
Conread position:
               
216-682
               

               
Cow position:
               
chr5:57591492-57591940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
10, 137
               

               
Conread position:
               
219-519
               

               
Cow position:
               
chr5:69520697-69520988 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
220-570
               

               
Cow position:
               
chr5:22643411-22643086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
91, 57
               

               
Conread position:
               
220-573
               

               
Cow position:
               
chr5:50215752-50215413 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
249
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
220-652
               

               
Cow position:
               
chr5:34561815-34562235 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
283
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
176, 105
               

               
Conread position:
               
220-652
               

               
Cow position:
               
chr5:34977031-34976613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
435
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
149, 11
               

               
Conread position:
               
220-675
               

               
Cow position:
               
chr5:63647668-63647229 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
456
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
39, 0
               

               
Conread position:
               
222-671
               

               
Cow position:
               
chr5:59082387-59081949 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
208, 132
               

               
Conread position:
               
222-682
               

               
Cow position:
               
chr5:74610883-74610439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
428, 64
               

               
Conread position:
               
223-594
               

               
Cow position:
               
chr5:4220790-4221150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
221, 105
               

               
Conread position:
               
223-666
               

               
Cow position:
               
chr5:52667839-52668279 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
256, 15
               

               
Conread position:
               
223-675
               

               
Cow position:
               
chr5:4322220-4322661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
270, 120
               

               
Conread position:
               
223-682
               

               
Cow position:
               
chr5:69461144-69461587 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
468
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
196, 51
               

               
Conread position:
               
224-491
               

               
Cow position:
               
chr5:21964096-21964358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
155, 42
               

               
Conread position:
               
224-629
               

               
Cow position:
               
chr5:52040509-52040118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
67, 0
               

               
Conread position:
               
226-650
               

               
Cow position:
               
chr5:29061112-29060715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
61, 82
               

               
Conread position:
               
226-678
               

               
Cow position:
               
chr5:1987431-1987861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
186, 11
               

               
Conread position:
               
227-461
               

               
Cow position:
               
chr5:17644842-17644615 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
227-653
               

               
Cow position:
               
chr5:7044897-7044479 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
428
               

               
Alignm identity:
               
289
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
185, 98
               

               
Conread position:
               
229-494
               

               
Cow position:
               
chr5:6670382-6670121 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
22, 28
               

               
Conread position:
               
229-682
               

               
Cow position:
               
chr5:46512951-46512515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
230-565
               

               
Cow position:
               
chr5:37808848-37808520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
103, 53
               

               
Conread position:
               
231-538
               

               
Cow position:
               
chr5:55928760-55929060 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
22, 34
               

               
Conread position:
               
231-552
               

               
Cow position:
               
chr5:57575583-57575904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
326
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
182, 94
               

               
Conread position:
               
231-565
               

               
Cow position:
               
chr5:47323268-47323605 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
103, 78
               

               
Conread position:
               
232-684
               

               
Cow position:
               
chr5:71722879-71723339 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
41, 143
               

               
Conread position:
               
235-479
               

               
Cow position:
               
chr5:3668719-3668955 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
235-652
               

               
Cow position:
               
chr5:44028480-44028084 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
180, 41
               

               
Conread position:
               
236-492
               

               
Cow position:
               
chr5:28957794-28957544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
175, 143
               

               
Conread position:
               
237-545
               

               
Cow position:
               
chr5:38838234-38837931 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
195
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
199, 87
               

               
Conread position:
               
237-579
               

               
Cow position:
               
chr5:51935006-51935346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
347
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
88, 158
               

               
Conread position:
               
237-652
               

               
Cow position:
               
chr5:31217235-31216827 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
427
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
184, 31
               

               
Conread position:
               
237-678
               

               
Cow position:
               
chr5:57266074-57265645 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
448
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
188, 85
               

               
Conread position:
               
238-466
               

               
Cow position:
               
chr5:43816786-43816562 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
180, 11
               

               
Conread position:
               
238-667
               

               
Cow position:
               
chr5:19778759-19778324 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
187, 89
               

               
Conread position:
               
238-667
               

               
Cow position:
               
chr5:45472090-45472515 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
92, 54
               

               
Conread position:
               
239-643
               

               
Cow position:
               
chr5:50599879-50600263 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
265
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
262, 53
               

               
Conread position:
               
239-684
               

               
Cow position:
               
chr5:39333716-39333270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
459
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
109, 27
               

               
Conread position:
               
241-475
               

               
Cow position:
               
chr5:41452839-41452612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
178, 61
               

               
Conread position:
               
241-580
               

               
Cow position:
               
chr5:59115208-59115535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
343
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
94, 51
               

               
Conread position:
               
243-646
               

               
Cow position:
               
chr5:55955735-55956130 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
410
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
247, 78
               

               
Conread position:
               
243-652
               

               
Cow position:
               
chr5:30178681-30178276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
153, 45
               

               
Conread position:
               
244-571
               

               
Cow position:
               
chr5:56317125-56317438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
216
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
244-579
               

               
Cow position:
               
chr5:12866998-12866671 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
340
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
85, 176
               

               
Conread position:
               
244-652
               

               
Cow position:
               
chr5:30092799-30092402 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
92, 30
               

               
Conread position:
               
244-675
               

               
Cow position:
               
chr5:41010166-41009761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
432
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
81, 0
               

               
Conread position:
               
245-629
               

               
Cow position:
               
chr5:64697612-64697991 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
103, 72
               

               
Conread position:
               
245-652
               

               
Cow position:
               
chr5:44028914-44028526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
257, 108
               

               
Conread position:
               
246-577
               

               
Cow position:
               
chr5:30950087-30949760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
332
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6.02558e-44
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
248-656
               

               
Cow position:
               
chr5:65967897-65967507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
411
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
172, 77
               

               
Conread position:
               
251-499
               

               
Cow position:
               
chr5:21920205-21920457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
85, 230
               

               
Conread position:
               
253-681
               

               
Cow position:
               
chr5:44673523-44673961 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
444
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
162, 75
               

               
Conread position:
               
262-643
               

               
Cow position:
               
chr5:47696594-47696243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
146, 36
               

               
Conread position:
               
265-579
               

               
Cow position:
               
chr5:54060125-54060433 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
316
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
125, 30
               

               
Conread position:
               
265-580
               

               
Cow position:
               
chr5:16206308-16205997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
213
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
35, 64
               

               
Conread position:
               
265-644
               

               
Cow position:
               
chr5:12673613-12673262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
8, 38
               

               
Conread position:
               
265-646
               

               
Cow position:
               
chr5:60175317-60175706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
138, 78
               

               
Conread position:
               
265-649
               

               
Cow position:
               
chr5:61809837-61809474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
159, 89
               

               
Conread position:
               
265-652
               

               
Cow position:
               
chr5:35459443-35459070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
237, 26
               

               
Conread position:
               
265-652
               

               
Cow position:
               
chr5:42050399-42050770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
154, 60
               

               
Conread position:
               
265-671
               

               
Cow position:
               
chr5:54048497-54048106 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
408
               

               
Alignm identity:
               
271
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
250, 26
               

               
Conread position:
               
266-580
               

               
Cow position:
               
chr5:36255411-36255099 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
136, 87
               

               
Conread position:
               
266-652
               

               
Cow position:
               
chr5:66972276-66972656 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
268-648
               

               
Cow position:
               
chr5:35247261-35246885 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 62
               

               
Conread position:
               
268-648
               

               
Cow position:
               
chr5:60117253-60117650 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
260
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
5, 76
               

               
Conread position:
               
268-652
               

               
Cow position:
               
chr5:30629308-30628927 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
5, 61
               

               
Conread position:
               
269-671
               

               
Cow position:
               
chr5:49919782-49920171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
406
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
5.00264e-43
               

               
Alignm gaps (pig, cow):
               
194, 19
               

               
Conread position:
               
271-544
               

               
Cow position:
               
chr5:65883922-65883651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
113, 104
               

               
Conread position:
               
272-659
               

               
Cow position:
               
chr5:12761261-12760887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
64, 43
               

               
Conread position:
               
272-684
               

               
Cow position:
               
chr5:66581818-66582228 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
419
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
216, 56
               

               
Conread position:
               
273-620
               

               
Cow position:
               
chr5:45397434-45397761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
52, 0
               

               
Conread position:
               
274-475
               

               
Cow position:
               
chr5:51801113-51800919 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
275-652
               

               
Cow position:
               
chr5:25035384-25035028 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
19, 0
               

               
Conread position:
               
275-683
               

               
Cow position:
               
chr5:19335932-19335523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
413
               

               
Alignm identity:
               
276
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
16, 383
               

               
Conread position:
               
276-676
               

               
Cow position:
               
chr5:64027149-64026760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
407
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
355, 52
               

               
Conread position:
               
277-504
               

               
Cow position:
               
chr5:16214547-16214769 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
146, 41
               

               
Conread position:
               
277-658
               

               
Cow position:
               
chr5:11540188-11539820 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
270, 51
               

               
Conread position:
               
277-675
               

               
Cow position:
               
chr5:29097219-29097606 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
404
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
49, 130
               

               
Conread position:
               
279-580
               

               
Cow position:
               
chr5:14473551-14473245 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
208
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
57, 14
               

               
Conread position:
               
279-663
               

               
Cow position:
               
chr5:36650413-36650791 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
205, 29
               

               
Conread position:
               
281-545
               

               
Cow position:
               
chr5:67540339-67540077 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
143, 47
               

               
Conread position:
               
281-652
               

               
Cow position:
               
chr5:36624097-36624477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
80, 138
               

               
Conread position:
               
281-680
               

               
Cow position:
               
chr5:73168134-73167759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
401
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
362, 21
               

               
Conread position:
               
283-666
               

               
Cow position:
               
chr5:991332-991712 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
224, 45
               

               
Conread position:
               
285-574
               

               
Cow position:
               
chr5:45273633-45273352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
290
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
43, 0
               

               
Conread position:
               
285-585
               

               
Cow position:
               
chr5:54768042-54767748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
302
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
135, 43
               

               
Conread position:
               
286-579
               

               
Cow position:
               
chr5:63427137-63426847 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
296
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
279, 25
               

               
Conread position:
               
294-558
               

               
Cow position:
               
chr5:56680124-56680392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
271
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
125, 34
               

               
Conread position:
               
294-652
               

               
Cow position:
               
chr5:52126652-52126998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
252, 51
               

               
Conread position:
               
297-579
               

               
Cow position:
               
chr5:26477132-26476861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
286
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
125, 30
               

               
Conread position:
               
298-652
               

               
Cow position:
               
chr5:7057525-7057171 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
33, 107
               

               
Conread position:
               
298-656
               

               
Cow position:
               
chr5:64140411-64140768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
365
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 67
               

               
Conread position:
               
298-666
               

               
Cow position:
               
chr5:50857813-50858176 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
24, 10
               

               
Conread position:
               
298-669
               

               
Cow position:
               
chr5:18289010-18289363 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
374
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
350, 30
               

               
Conread position:
               
299-667
               

               
Cow position:
               
chr5:61999660-61999311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
373
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
349, 80
               

               
Conread position:
               
302-681
               

               
Cow position:
               
chr5:12901800-12902175 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
266
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
100, 26
               

               
Conread position:
               
304-646
               

               
Cow position:
               
chr5:71846037-71845706 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
22, 92
               

               
Conread position:
               
305-534
               

               
Cow position:
               
chr5:57561405-57561635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
305-576
               

               
Cow position:
               
chr5:45574503-45574774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
277
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
111, 23
               

               
Conread position:
               
305-578
               

               
Cow position:
               
chr5:7697893-7698156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
186
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
202, 23
               

               
Conread position:
               
305-585
               

               
Cow position:
               
chr5:53710806-53710526 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
282
               

               
Alignm identity:
               
197
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
31, 99
               

               
Conread position:
               
305-591
               

               
Cow position:
               
chr5:19523785-19524067 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
305-651
               

               
Cow position:
               
chr5:60016055-60016389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
349
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
39, 23
               

               
Conread position:
               
305-673
               

               
Cow position:
               
chr5:33560846-33560490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 23
               

               
Conread position:
               
306-652
               

               
Cow position:
               
chr5:35319684-35319334 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
354
               

               
Alignm identity:
               
221
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
82, 16
               

               
Conread position:
               
307-574
               

               
Cow position:
               
chr5:60183691-60183958 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
54, 26
               

               
Conread position:
               
312-595
               

               
Cow position:
               
chr5:58490612-58490904 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
297
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
106, 16
               

               
Conread position:
               
312-629
               

               
Cow position:
               
chr5:64168345-64168034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
97, 88
               

               
Conread position:
               
312-680
               

               
Cow position:
               
chr5:43371303-43370936 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
246
               

               
Alignm E-value:
               
4.99983e-42
               

               
Alignm gaps (pig, cow):
               
336, 111
               

               
Conread position:
               
315-659
               

               
Cow position:
               
chr5:31475579-31475917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
88, 0
               

               
Conread position:
               
316-574
               

               
Cow position:
               
chr5:41293979-41294233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
224, 12
               

               
Conread position:
               
318-579
               

               
Cow position:
               
chr5:55019194-55019448 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
177
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
319-671
               

               
Cow position:
               
chr5:59384791-59384441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
87, 136
               

               
Conread position:
               
322-668
               

               
Cow position:
               
chr5:46681810-46681481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
236
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
140, 6
               

               
Conread position:
               
322-679
               

               
Cow position:
               
chr5:25365994-25366351 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
370
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
93, 15
               

               
Conread position:
               
325-676
               

               
Cow position:
               
chr5:64555433-64555784 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
4.00001e-40
               

               
Alignm gaps (pig, cow):
               
18, 77
               

               
Conread position:
               
327-643
               

               
Cow position:
               
chr5:53946802-53947116 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
215
               

               
Alignm E-value:
               
9.99995e-41
               

               
Alignm gaps (pig, cow):
               
50, 90
               

               
Conread position:
               
327-668
               

               
Cow position:
               
chr5:49474638-49474311 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
345
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
61, 26
               

               
Conread position:
               
327-682
               

               
Cow position:
               
chr5:36039097-36038747 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
87, 58
               

               
Conread position:
               
328-573
               

               
Cow position:
               
chr5:35125961-35126206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
247
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
5e-31
               

               
Alignm gaps (pig, cow):
               
86, 74
               

               
Conread position:
               
328-583
               

               
Cow position:
               
chr5:1087288-1087045 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
38, 0
               

               
Conread position:
               
328-652
               

               
Cow position:
               
chr5:71015972-71015659 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
141, 62
               

               
Conread position:
               
329-656
               

               
Cow position:
               
chr5:33833953-33834270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
330-574
               

               
Cow position:
               
chr5:59873181-59872928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
254
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
101, 0
               

               
Conread position:
               
331-652
               

               
Cow position:
               
chr5:57527007-57526701 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
331-663
               

               
Cow position:
               
chr5:35229219-35228907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
332-659
               

               
Cow position:
               
chr5:43402812-43403142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
333
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
92, 217
               

               
Conread position:
               
336-655
               

               
Cow position:
               
chr5:56548494-56548795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
38, 67
               

               
Conread position:
               
336-684
               

               
Cow position:
               
chr5:65140203-65140558 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
363
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
34, 73
               

               
Conread position:
               
343-666
               

               
Cow position:
               
chr5:14345176-14344857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
328
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
12, 62
               

               
Conread position:
               
346-652
               

               
Cow position:
               
chr5:19752231-19752527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
77, 44
               

               
Conread position:
               
346-665
               

               
Cow position:
               
chr5:57756105-57755795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
322
               

               
Alignm identity:
               
219
               

               
Alignm E-value:
               
9e-37
               

               
Alignm gaps (pig, cow):
               
68, 77
               

               
Conread position:
               
346-670
               

               
Cow position:
               
chr5:61912386-61912049 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
342
               

               
Alignm identity:
               
228
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
60, 79
               

               
Conread position:
               
346-679
               

               
Cow position:
               
chr5:59395583-59395923 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
346
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
120, 70
               

               
Conread position:
               
347-629
               

               
Cow position:
               
chr5:57419864-57419593 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
348-666
               

               
Cow position:
               
chr5:61914498-61914811 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
325
               

               
Alignm identity:
               
227
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
128, 55
               

               
Conread position:
               
349-656
               

               
Cow position:
               
chr5:44921468-44921156 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
317
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
117, 54
               

               
Conread position:
               
350-621
               

               
Cow position:
               
chr5:49668408-49668683 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
280
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
102, 66
               

               
Conread position:
               
351-591
               

               
Cow position:
               
chr5:33654616-33654381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
16, 53
               

               
Conread position:
               
359-640
               

               
Cow position:
               
chr5:63234887-63234609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
204, 101
               

               
Conread position:
               
359-652
               

               
Cow position:
               
chr5:56136982-56136695 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
65, 43
               

               
Conread position:
               
359-662
               

               
Cow position:
               
chr5:11769207-11769508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
211
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
18, 118
               

               
Conread position:
               
359-664
               

               
Cow position:
               
chr5:7012909-7012612 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
307
               

               
Alignm identity:
               
220
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
55, 44
               

               
Conread position:
               
359-676
               

               
Cow position:
               
chr5:43604082-43604386 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
359-679
               

               
Cow position:
               
chr5:20843461-20843146 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
327
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
1.99965e-42
               

               
Alignm gaps (pig, cow):
               
44, 66
               

               
Conread position:
               
360-629
               

               
Cow position:
               
chr5:59330808-59330536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
42, 208
               

               
Conread position:
               
361-673
               

               
Cow position:
               
chr5:41935716-41935409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
319
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
19, 46
               

               
Conread position:
               
370-670
               

               
Cow position:
               
chr5:15470882-15471162 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
301
               

               
Alignm identity:
               
206
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
370-676
               

               
Cow position:
               
chr5:30418924-30419220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
308
               

               
Alignm identity:
               
202
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
65, 31
               

               
Conread position:
               
374-652
               

               
Cow position:
               
chr5:2423333-2423063 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
24, 43
               

               
Conread position:
               
376-579
               

               
Cow position:
               
chr5:55061881-55062083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
49, 26
               

               
Conread position:
               
377-579
               

               
Cow position:
               
chr5:41981327-41981525 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
50, 37
               

               
Conread position:
               
379-629
               

               
Cow position:
               
chr5:37894951-37895198 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
46, 23
               

               
Conread position:
               
382-621
               

               
Cow position:
               
chr5:49501862-49501623 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
176, 8
               

               
Conread position:
               
383-666
               

               
Cow position:
               
chr5:61784765-61784485 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
31, 0
               

               
Conread position:
               
384-628
               

               
Cow position:
               
chr5:19796936-19797184 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
250
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
18, 123
               

               
Conread position:
               
385-678
               

               
Cow position:
               
chr5:270137-269843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
298
               

               
Alignm identity:
               
198
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
58, 18
               

               
Conread position:
               
386-580
               

               
Cow position:
               
chr5:3588992-3589185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
28, 63
               

               
Conread position:
               
386-666
               

               
Cow position:
               
chr5:37983129-37983409 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
196
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
63, 17
               

               
Conread position:
               
387-628
               

               
Cow position:
               
chr5:55795998-55795768 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
103, 17
               

               
Conread position:
               
387-647
               

               
Cow position:
               
chr5:33273657-33273918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
182
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
27, 99
               

               
Conread position:
               
387-652
               

               
Cow position:
               
chr5:6444184-6443917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
100, 27
               

               
Conread position:
               
387-664
               

               
Cow position:
               
chr5:54875733-54875453 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
86, 44
               

               
Conread position:
               
387-673
               

               
Cow position:
               
chr5:62811790-62812074 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
63, 16
               

               
Conread position:
               
387-678
               

               
Cow position:
               
chr5:70678673-70678392 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
210
               

               
Alignm E-value:
               
9.99967e-42
               

               
Alignm gaps (pig, cow):
               
263, 16
               

               
Conread position:
               
390-621
               

               
Cow position:
               
chr5:61007035-61007262 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
170
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
26, 0
               

               
Conread position:
               
390-649
               

               
Cow position:
               
chr5:50101408-50101155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
33, 13
               

               
Conread position:
               
390-652
               

               
Cow position:
               
chr5:30406176-30406440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
29, 8
               

               
Conread position:
               
390-664
               

               
Cow position:
               
chr5:30247550-30247287 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
205
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
13, 0
               

               
Conread position:
               
391-629
               

               
Cow position:
               
chr5:23912231-23911995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
21, 11
               

               
Conread position:
               
391-655
               

               
Cow position:
               
chr5:52108296-52108029 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
166, 12
               

               
Conread position:
               
391-682
               

               
Cow position:
               
chr5:65883657-65883370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
257, 178
               

               
Conread position:
               
392-629
               

               
Cow position:
               
chr5:57279352-57279589 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
22, 191
               

               
Conread position:
               
393-667
               

               
Cow position:
               
chr5:46672178-46672455 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
285
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
148, 21
               

               
Conread position:
               
394-683
               

               
Cow position:
               
chr5:17835188-17834899 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
295
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
20, 127
               

               
Conread position:
               
398-572
               

               
Cow position:
               
chr5:56287525-56287352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
175
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
34, 0
               

               
Conread position:
               
403-629
               

               
Cow position:
               
chr5:37713675-37713449 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
229
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
7, 174
               

               
Conread position:
               
403-666
               

               
Cow position:
               
chr5:34347747-34347490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
1e-39
               

               
Alignm gaps (pig, cow):
               
252, 64
               

               
Conread position:
               
404-579
               

               
Cow position:
               
chr5:58555118-58555292 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
29, 162
               

               
Conread position:
               
404-675
               

               
Cow position:
               
chr5:2827359-2827626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
171, 17
               

               
Conread position:
               
404-675
               

               
Cow position:
               
chr5:5760331-5760057 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
279
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
10, 18
               

               
Conread position:
               
404-679
               

               
Cow position:
               
chr5:25597820-25598076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
405-643
               

               
Cow position:
               
chr5:35397488-35397721 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
20, 9
               

               
Conread position:
               
405-652
               

               
Cow position:
               
chr5:40097582-40097823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
405-684
               

               
Cow position:
               
chr5:67679162-67679439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
281
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
158, 139
               

               
Conread position:
               
406-554
               

               
Cow position:
               
chr5:20595448-20595597 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
151
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
14, 118
               

               
Conread position:
               
407-652
               

               
Cow position:
               
chr5:23208942-23209185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
162, 0
               

               
Conread position:
               
407-680
               

               
Cow position:
               
chr5:37266057-37265788 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
275
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
223, 162
               

               
Conread position:
               
408-629
               

               
Cow position:
               
chr5:30266901-30266682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
173, 0
               

               
Conread position:
               
408-638
               

               
Cow position:
               
chr5:60741231-60741457 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
409-648
               

               
Cow position:
               
chr5:69383243-69383473 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
240
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
409-678
               

               
Cow position:
               
chr5:32935731-32935996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
272
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
26, 20
               

               
Conread position:
               
413-649
               

               
Cow position:
               
chr5:55259399-55259631 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
239
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
12, 132
               

               
Conread position:
               
413-652
               

               
Cow position:
               
chr5:33918715-33918477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
12, 169
               

               
Conread position:
               
413-652
               

               
Cow position:
               
chr5:69333489-69333727 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
12, 135
               

               
Conread position:
               
413-683
               

               
Cow position:
               
chr5:18513715-18513447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
273
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
237, 64
               

               
Conread position:
               
415-679
               

               
Cow position:
               
chr5:58232131-58232393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
268
               

               
Alignm identity:
               
179
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
66, 15
               

               
Conread position:
               
415-681
               

               
Cow position:
               
chr5:65760535-65760278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
190
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
235, 6
               

               
Conread position:
               
416-640
               

               
Cow position:
               
chr5:30153040-30152821 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
416-652
               

               
Cow position:
               
chr5:65343617-65343855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
164
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
73, 168
               

               
Conread position:
               
416-679
               

               
Cow position:
               
chr5:56613570-56613314 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
265
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
137, 146
               

               
Conread position:
               
417-629
               

               
Cow position:
               
chr5:16939599-16939389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
417-652
               

               
Cow position:
               
chr5:26133102-26132869 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
417-652
               

               
Cow position:
               
chr5:51555086-51554859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
417-652
               

               
Cow position:
               
chr5:58737763-58737530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
417-653
               

               
Cow position:
               
chr5:30561927-30562155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
156, 0
               

               
Conread position:
               
417-659
               

               
Cow position:
               
chr5:22608638-22608872 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
37, 0
               

               
Conread position:
               
417-666
               

               
Cow position:
               
chr5:4120019-4120266 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
171
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
12, 166
               

               
Conread position:
               
417-667
               

               
Cow position:
               
chr5:59627096-59627333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
251
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
3e-37
               

               
Alignm gaps (pig, cow):
               
7, 0
               

               
Conread position:
               
417-673
               

               
Cow position:
               
chr5:19860249-19859998 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
39, 92
               

               
Conread position:
               
417-674
               

               
Cow position:
               
chr5:29829900-29829639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
1e-30
               

               
Alignm gaps (pig, cow):
               
38, 133
               

               
Conread position:
               
417-676
               

               
Cow position:
               
chr5:57393309-57393058 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
109, 0
               

               
Conread position:
               
417-677
               

               
Cow position:
               
chr5:57062534-57062278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
262
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
123, 174
               

               
Conread position:
               
417-679
               

               
Cow position:
               
chr5:52852966-52853216 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
163, 0
               

               
Conread position:
               
417-681
               

               
Cow position:
               
chr5:6126833-6127082 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
266
               

               
Alignm identity:
               
180
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
7, 47
               

               
Conread position:
               
417-684
               

               
Cow position:
               
chr5:61771108-61771381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
276
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
45, 164
               

               
Conread position:
               
418-629
               

               
Cow position:
               
chr5:35513211-35513424 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
164, 0
               

               
Conread position:
               
418-652
               

               
Cow position:
               
chr5:873034-873268 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
7, 128
               

               
Conread position:
               
418-652
               

               
Cow position:
               
chr5:61414342-61414574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
235
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
163, 0
               

               
Conread position:
               
418-656
               

               
Cow position:
               
chr5:18062323-18062080 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
245
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
113, 108
               

               
Conread position:
               
418-671
               

               
Cow position:
               
chr5:56060074-56059819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
4e-39
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
418-684
               

               
Cow position:
               
chr5:46541059-46540801 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
69, 59
               

               
Conread position:
               
418-684
               

               
Cow position:
               
chr5:55965898-55965632 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
269
               

               
Alignm identity:
               
188
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
246, 163
               

               
Conread position:
               
420-629
               

               
Cow position:
               
chr5:69751389-69751182 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
12, 72
               

               
Conread position:
               
420-640
               

               
Cow position:
               
chr5:51920286-51920504 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
161, 0
               

               
Conread position:
               
420-644
               

               
Cow position:
               
chr5:40170428-40170201 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
12, 166
               

               
Conread position:
               
420-652
               

               
Cow position:
               
chr5:22565618-22565845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
420-669
               

               
Cow position:
               
chr5:67672221-67672475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
130, 25
               

               
Conread position:
               
421-578
               

               
Cow position:
               
chr5:50526261-50526417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
421-605
               

               
Cow position:
               
chr5:11289394-11289209 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
188
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
47, 163
               

               
Conread position:
               
421-616
               

               
Cow position:
               
chr5:61492092-61492288 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
149, 0
               

               
Conread position:
               
421-641
               

               
Cow position:
               
chr5:48867465-48867255 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
136, 0
               

               
Conread position:
               
421-650
               

               
Cow position:
               
chr5:69033221-69033000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
421-652
               

               
Cow position:
               
chr5:4226346-4226581 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
165
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
151, 127
               

               
Conread position:
               
421-653
               

               
Cow position:
               
chr5:15364268-15364498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
140, 78
               

               
Conread position:
               
421-666
               

               
Cow position:
               
chr5:6520010-6520247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
168
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
65, 126
               

               
Conread position:
               
421-672
               

               
Cow position:
               
chr5:55783951-55783716 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
252
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
60, 0
               

               
Conread position:
               
421-675
               

               
Cow position:
               
chr5:2469208-2468964 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
255
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
421-675
               

               
Cow position:
               
chr5:29970704-29970962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
261
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
41, 156
               

               
Conread position:
               
421-681
               

               
Cow position:
               
chr5:54750814-54751065 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
264
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
216, 33
               

               
Conread position:
               
421-683
               

               
Cow position:
               
chr5:35989756-35990020 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
41, 81
               

               
Conread position:
               
421-684
               

               
Cow position:
               
chr5:34915054-34914794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
267
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
199, 146
               

               
Conread position:
               
422-656
               

               
Cow position:
               
chr5:52137935-52138169 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
238
               

               
Alignm identity:
               
172
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
45, 161
               

               
Conread position:
               
422-663
               

               
Cow position:
               
chr5:53935547-53935319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
242
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
422-683
               

               
Cow position:
               
chr5:61049332-61049592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
187
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
229, 159
               

               
Conread position:
               
423-581
               

               
Cow position:
               
chr5:38739402-38739244 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
112
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
423-659
               

               
Cow position:
               
chr5:70750184-70749953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
423-663
               

               
Cow position:
               
chr5:44810238-44810000 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
175
               

               
Alignm E-value:
               
4.00001e-41
               

               
Alignm gaps (pig, cow):
               
158, 0
               

               
Conread position:
               
423-681
               

               
Cow position:
               
chr5:60422969-60422719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
152, 0
               

               
Conread position:
               
424-629
               

               
Cow position:
               
chr5:56072159-56071948 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
43, 164
               

               
Conread position:
               
424-674
               

               
Cow position:
               
chr5:63187881-63187628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
258
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
2e-33
               

               
Alignm gaps (pig, cow):
               
26, 96
               

               
Conread position:
               
424-684
               

               
Cow position:
               
chr5:11562721-11562469 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
263
               

               
Alignm identity:
               
185
               

               
Alignm E-value:
               
6e-33
               

               
Alignm gaps (pig, cow):
               
55, 142
               

               
Conread position:
               
425-665
               

               
Cow position:
               
chr5:17104856-17105083 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
57, 0
               

               
Conread position:
               
425-673
               

               
Cow position:
               
chr5:37090642-37090389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
28, 122
               

               
Conread position:
               
425-673
               

               
Cow position:
               
chr5:71445395-71445639 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
249
               

               
Alignm identity:
               
178
               

               
Alignm E-value:
               
3e-38
               

               
Alignm gaps (pig, cow):
               
25, 0
               

               
Conread position:
               
425-674
               

               
Cow position:
               
chr5:45405041-45405295 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
257
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
41, 163
               

               
Conread position:
               
425-684
               

               
Cow position:
               
chr5:20394337-20394595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
117, 0
               

               
Conread position:
               
426-651
               

               
Cow position:
               
chr5:61132907-61132673 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
236
               

               
Alignm identity:
               
160
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
27, 128
               

               
Conread position:
               
427-684
               

               
Cow position:
               
chr5:60212589-60212842 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
260
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
46, 121
               

               
Conread position:
               
428-684
               

               
Cow position:
               
chr5:56549370-56549626 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
259
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
3e-36
               

               
Alignm gaps (pig, cow):
               
30, 139
               

               
Conread position:
               
431-640
               

               
Cow position:
               
chr5:56361805-56362025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
132, 51
               

               
Conread position:
               
431-652
               

               
Cow position:
               
chr5:5016438-5016649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
224
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
200, 47
               

               
Conread position:
               
431-652
               

               
Cow position:
               
chr5:60948142-60948358 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
431-673
               

               
Cow position:
               
chr5:17828470-17828230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
244
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
135, 124
               

               
Conread position:
               
431-678
               

               
Cow position:
               
chr5:52137045-52136804 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
248
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
6e-34
               

               
Alignm gaps (pig, cow):
               
150, 0
               

               
Conread position:
               
431-684
               

               
Cow position:
               
chr5:51539132-51539381 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
169
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
207, 150
               

               
Conread position:
               
432-666
               

               
Cow position:
               
chr5:3743332-3743563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
143, 115
               

               
Conread position:
               
433-656
               

               
Cow position:
               
chr5:26894711-26894481 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
433-658
               

               
Cow position:
               
chr5:57825147-57825370 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
232
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
33, 72
               

               
Conread position:
               
433-658
               

               
Cow position:
               
chr5:66659520-66659746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
8e-36
               

               
Alignm gaps (pig, cow):
               
126, 0
               

               
Conread position:
               
433-672
               

               
Cow position:
               
chr5:64060457-64060693 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
241
               

               
Alignm identity:
               
174
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
225, 128
               

               
Conread position:
               
434-652
               

               
Cow position:
               
chr5:28681505-28681290 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
129, 113
               

               
Conread position:
               
435-654
               

               
Cow position:
               
chr5:36370296-36370502 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
436-665
               

               
Cow position:
               
chr5:44196915-44196691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
230
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
124, 0
               

               
Conread position:
               
440-673
               

               
Cow position:
               
chr5:19079270-19079489 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
234
               

               
Alignm identity:
               
163
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
83, 0
               

               
Conread position:
               
441-652
               

               
Cow position:
               
chr5:57087043-57086836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
9, 36
               

               
Conread position:
               
441-663
               

               
Cow position:
               
chr5:6544117-6543898 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
141, 0
               

               
Conread position:
               
441-666
               

               
Cow position:
               
chr5:49407374-49407150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
207, 106
               

               
Conread position:
               
441-684
               

               
Cow position:
               
chr5:28814928-28814689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
246
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
215, 30
               

               
Conread position:
               
443-652
               

               
Cow position:
               
chr5:46063518-46063719 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
132, 0
               

               
Conread position:
               
443-684
               

               
Cow position:
               
chr5:17826205-17826444 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
243
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
14, 81
               

               
Conread position:
               
446-648
               

               
Cow position:
               
chr5:50579142-50578942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
102, 119
               

               
Conread position:
               
446-656
               

               
Cow position:
               
chr5:13270993-13270785 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
117, 38
               

               
Conread position:
               
447-654
               

               
Cow position:
               
chr5:27084321-27084527 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
14, 136
               

               
Conread position:
               
449-666
               

               
Cow position:
               
chr5:34288223-34288014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
107, 33
               

               
Conread position:
               
450-638
               

               
Cow position:
               
chr5:30035095-30035281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
131, 0
               

               
Conread position:
               
450-640
               

               
Cow position:
               
chr5:54753224-54753035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
40, 126
               

               
Conread position:
               
450-648
               

               
Cow position:
               
chr5:62341056-62341252 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
83, 133
               

               
Conread position:
               
450-666
               

               
Cow position:
               
chr5:37197804-37198019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
110, 93
               

               
Conread position:
               
450-670
               

               
Cow position:
               
chr5:38820632-38820414 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
152
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
201, 41
               

               
Conread position:
               
450-671
               

               
Cow position:
               
chr5:16185406-16185622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
450-680
               

               
Cow position:
               
chr5:55166748-55166974 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
451-648
               

               
Cow position:
               
chr5:29256678-29256486 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
80, 0
               

               
Conread position:
               
451-652
               

               
Cow position:
               
chr5:24915498-24915299 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
202
               

               
Alignm identity:
               
139
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
116, 0
               

               
Conread position:
               
451-652
               

               
Cow position:
               
chr5:44798833-44799036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
186, 130
               

               
Conread position:
               
451-675
               

               
Cow position:
               
chr5:5808126-5808345 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
12, 0
               

               
Conread position:
               
451-683
               

               
Cow position:
               
chr5:58756377-58756152 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
233
               

               
Alignm identity:
               
161
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
130, 0
               

               
Conread position:
               
452-652
               

               
Cow position:
               
chr5:30796942-30796746 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
11, 0
               

               
Conread position:
               
452-682
               

               
Cow position:
               
chr5:19972973-19972748 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
231
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
5, 0
               

               
Conread position:
               
453-672
               

               
Cow position:
               
chr5:40122579-40122364 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
122, 0
               

               
Conread position:
               
454-629
               

               
Cow position:
               
chr5:38040532-38040365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
176
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
121, 0
               

               
Conread position:
               
454-629
               

               
Cow position:
               
chr5:54330913-54331090 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
180
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
134, 5
               

               
Conread position:
               
454-638
               

               
Cow position:
               
chr5:20812578-20812761 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
103, 63
               

               
Conread position:
               
454-640
               

               
Cow position:
               
chr5:53980722-53980538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
134
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
128, 0
               

               
Conread position:
               
454-647
               

               
Cow position:
               
chr5:44734693-44734506 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
123, 0
               

               
Conread position:
               
454-649
               

               
Cow position:
               
chr5:43839968-43839774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
197
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
7, 128
               

               
Conread position:
               
454-662
               

               
Cow position:
               
chr5:16668729-16668926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
108, 0
               

               
Conread position:
               
454-662
               

               
Cow position:
               
chr5:63173011-63172812 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
209
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
23, 0
               

               
Conread position:
               
454-681
               

               
Cow position:
               
chr5:57399220-57398997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
228
               

               
Alignm identity:
               
167
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
22, 0
               

               
Conread position:
               
456-656
               

               
Cow position:
               
chr5:62995991-62996189 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
201
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
2e-34
               

               
Alignm gaps (pig, cow):
               
125, 0
               

               
Conread position:
               
456-683
               

               
Cow position:
               
chr5:44901543-44901774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
237
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
60, 73
               

               
Conread position:
               
457-667
               

               
Cow position:
               
chr5:12562725-12562519 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
39, 86
               

               
Conread position:
               
457-671
               

               
Cow position:
               
chr5:22102593-22102794 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
155
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
457-671
               

               
Cow position:
               
chr5:49821463-49821679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
218
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
193, 105
               

               
Conread position:
               
457-671
               

               
Cow position:
               
chr5:54340804-54341011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
32, 0
               

               
Conread position:
               
458-666
               

               
Cow position:
               
chr5:64492310-64492518 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
211
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
190, 128
               

               
Conread position:
               
459-682
               

               
Cow position:
               
chr5:29172024-29172247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
227
               

               
Alignm identity:
               
166
               

               
Alignm E-value:
               
2e-35
               

               
Alignm gaps (pig, cow):
               
44, 94
               

               
Conread position:
               
460-684
               

               
Cow position:
               
chr5:56433919-56434137 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
461-670
               

               
Cow position:
               
chr5:19972768-19972563 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
114, 0
               

               
Conread position:
               
461-670
               

               
Cow position:
               
chr5:36634746-36634952 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
143
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
461-677
               

               
Cow position:
               
chr5:50421937-50421726 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
217
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
10, 0
               

               
Conread position:
               
462-656
               

               
Cow position:
               
chr5:31527356-31527163 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
7, 96
               

               
Conread position:
               
462-664
               

               
Cow position:
               
chr5:36205730-36205928 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
84, 0
               

               
Conread position:
               
462-665
               

               
Cow position:
               
chr5:38770574-38770374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
21, 0
               

               
Conread position:
               
462-666
               

               
Cow position:
               
chr5:46710622-46710823 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
462-666
               

               
Cow position:
               
chr5:46715522-46715723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
205
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
462-667
               

               
Cow position:
               
chr5:41736222-41736423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
90, 79
               

               
Conread position:
               
462-672
               

               
Cow position:
               
chr5:43465565-43465775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
188, 126
               

               
Conread position:
               
462-673
               

               
Cow position:
               
chr5:63068683-63068474 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
212
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
462-675
               

               
Cow position:
               
chr5:62822710-62822922 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
188, 72
               

               
Conread position:
               
462-679
               

               
Cow position:
               
chr5:52207583-52207799 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
219
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
188, 101
               

               
Conread position:
               
462-680
               

               
Cow position:
               
chr5:28881652-28881429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
225
               

               
Alignm identity:
               
162
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
95, 198
               

               
Conread position:
               
462-684
               

               
Cow position:
               
chr5:57139953-57139735 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
223
               

               
Alignm identity:
               
153
               

               
Alignm E-value:
               
3e-27
               

               
Alignm gaps (pig, cow):
               
85, 0
               

               
Conread position:
               
463-659
               

               
Cow position:
               
chr5:31648463-31648649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
198
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
189, 13
               

               
Conread position:
               
463-669
               

               
Cow position:
               
chr5:30221737-30221536 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
151
               

               
Alignm E-value:
               
5e-32
               

               
Alignm gaps (pig, cow):
               
102, 0
               

               
Conread position:
               
464-652
               

               
Cow position:
               
chr5:1005826-1005640 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
118, 0
               

               
Conread position:
               
464-683
               

               
Cow position:
               
chr5:44312372-44312150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
226
               

               
Alignm identity:
               
156
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
184, 7
               

               
Conread position:
               
465-656
               

               
Cow position:
               
chr5:69538583-69538772 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
465-670
               

               
Cow position:
               
chr5:59335813-59336016 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
7e-35
               

               
Alignm gaps (pig, cow):
               
55, 46
               

               
Conread position:
               
465-675
               

               
Cow position:
               
chr5:56327678-56327477 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
36, 112
               

               
Conread position:
               
466-673
               

               
Cow position:
               
chr5:51012043-51012248 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
9e-27
               

               
Alignm gaps (pig, cow):
               
64, 77
               

               
Conread position:
               
467-652
               

               
Cow position:
               
chr5:51800566-51800383 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
187
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
108, 95
               

               
Conread position:
               
468-669
               

               
Cow position:
               
chr5:56525666-56525467 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
8e-26
               

               
Alignm gaps (pig, cow):
               
185, 119
               

               
Conread position:
               
468-671
               

               
Cow position:
               
chr5:41226960-41226757 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
206
               

               
Alignm identity:
               
146
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
183, 114
               

               
Conread position:
               
468-674
               

               
Cow position:
               
chr5:46499606-46499809 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
207
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
94, 0
               

               
Conread position:
               
468-681
               

               
Cow position:
               
chr5:45854537-45854756 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
158
               

               
Alignm E-value:
               
2e-32
               

               
Alignm gaps (pig, cow):
               
33, 0
               

               
Conread position:
               
471-648
               

               
Cow position:
               
chr5:61201808-61201983 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
178
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
3e-26
               

               
Alignm gaps (pig, cow):
               
110, 0
               

               
Conread position:
               
471-649
               

               
Cow position:
               
chr5:55162675-55162851 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
125
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
111, 0
               

               
Conread position:
               
471-659
               

               
Cow position:
               
chr5:14454090-14454277 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
189
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
91, 0
               

               
Conread position:
               
471-674
               

               
Cow position:
               
chr5:70346350-70346552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
148
               

               
Alignm E-value:
               
5e-22
               

               
Alignm gaps (pig, cow):
               
29, 38
               

               
Conread position:
               
471-680
               

               
Cow position:
               
chr5:55041258-55041461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
210
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
103, 0
               

               
Conread position:
               
471-683
               

               
Cow position:
               
chr5:58446135-58445926 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
213
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
40, 0
               

               
Conread position:
               
472-683
               

               
Cow position:
               
chr5:30492744-30492531 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
216
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-29
               

               
Alignm gaps (pig, cow):
               
94, 111
               

               
Conread position:
               
473-671
               

               
Cow position:
               
chr5:60207759-60207950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
82, 0
               

               
Conread position:
               
474-671
               

               
Cow position:
               
chr5:67950734-67950539 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
199
               

               
Alignm identity:
               
138
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
176, 70
               

               
Conread position:
               
479-682
               

               
Cow position:
               
chr5:40637358-40637556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
204
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
483-652
               

               
Cow position:
               
chr5:43611759-43611925 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
1e-37
               

               
Alignm gaps (pig, cow):
               
98, 0
               

               
Conread position:
               
483-673
               

               
Cow position:
               
chr5:9487024-9486836 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
191
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
93, 0
               

               
Conread position:
               
483-673
               

               
Cow position:
               
chr5:40292878-40292691 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
136
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
170, 92
               

               
Conread position:
               
483-674
               

               
Cow position:
               
chr5:57447605-57447417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
192
               

               
Alignm identity:
               
149
               

               
Alignm E-value:
               
1e-38
               

               
Alignm gaps (pig, cow):
               
92, 0
               

               
Conread position:
               
483-684
               

               
Cow position:
               
chr5:19561387-19561187 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
203
               

               
Alignm identity:
               
147
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
177, 99
               

               
Conread position:
               
484-653
               

               
Cow position:
               
chr5:57687521-57687353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
24, 99
               

               
Conread position:
               
484-653
               

               
Cow position:
               
chr5:59662996-59662830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
170
               

               
Alignm identity:
               
124
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
78, 0
               

               
Conread position:
               
484-666
               

               
Cow position:
               
chr5:17987832-17987651 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
185
               

               
Alignm identity:
               
133
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
164, 36
               

               
Conread position:
               
485-652
               

               
Cow position:
               
chr5:26149097-26149261 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
168
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
97, 0
               

               
Conread position:
               
485-677
               

               
Cow position:
               
chr5:63939998-63939807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
137
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
14, 0
               

               
Conread position:
               
486-652
               

               
Cow position:
               
chr5:19052728-19052565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
167
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
5e-21
               

               
Alignm gaps (pig, cow):
               
96, 0
               

               
Conread position:
               
489-684
               

               
Cow position:
               
chr5:55949612-55949420 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
196
               

               
Alignm identity:
               
142
               

               
Alignm E-value:
               
4e-30
               

               
Alignm gaps (pig, cow):
               
79, 0
               

               
Conread position:
               
491-648
               

               
Cow position:
               
chr5:41530871-41530714 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
0, 0
               

               
Conread position:
               
491-664
               

               
Cow position:
               
chr5:54712996-54712830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
174
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
29, 0
               

               
Conread position:
               
491-666
               

               
Cow position:
               
chr5:12724322-12724150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
177
               

               
Alignm identity:
               
127
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
159, 42
               

               
Conread position:
               
491-681
               

               
Cow position:
               
chr5:24108991-24108800 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
194
               

               
Alignm identity:
               
144
               

               
Alignm E-value:
               
2e-31
               

               
Alignm gaps (pig, cow):
               
156, 91
               

               
Conread position:
               
491-683
               

               
Cow position:
               
chr5:56643136-56643326 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
141
               

               
Alignm E-value:
               
1e-27
               

               
Alignm gaps (pig, cow):
               
104, 89
               

               
Conread position:
               
492-680
               

               
Cow position:
               
chr5:58237380-58237197 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
193
               

               
Alignm identity:
               
140
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
62, 55
               

               
Conread position:
               
493-652
               

               
Cow position:
               
chr5:53825043-53824887 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
160
               

               
Alignm identity:
               
122
               

               
Alignm E-value:
               
3e-28
               

               
Alignm gaps (pig, cow):
               
72, 0
               

               
Conread position:
               
496-649
               

               
Cow position:
               
chr5:54555116-54554962 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
117
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
32, 89
               

               
Conread position:
               
496-666
               

               
Cow position:
               
chr5:58487449-58487613 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
171
               

               
Alignm identity:
               
130
               

               
Alignm E-value:
               
1e-28
               

               
Alignm gaps (pig, cow):
               
71, 0
               

               
Conread position:
               
496-673
               

               
Cow position:
               
chr5:15770382-15770202 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
181
               

               
Alignm identity:
               
129
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
154, 0
               

               
Conread position:
               
497-652
               

               
Cow position:
               
chr5:55749962-55749810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
156
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
35, 0
               

               
Conread position:
               
497-664
               

               
Cow position:
               
chr5:74980384-74980550 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
169
               

               
Alignm identity:
               
121
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
153, 85
               

               
Conread position:
               
499-670
               

               
Cow position:
               
chr5:21339192-21339014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
179
               

               
Alignm identity:
               
128
               

               
Alignm E-value:
               
2e-21
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
499-681
               

               
Cow position:
               
chr5:56624440-56624259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
184
               

               
Alignm identity:
               
135
               

               
Alignm E-value:
               
4e-29
               

               
Alignm gaps (pig, cow):
               
64, 84
               

               
Conread position:
               
501-666
               

               
Cow position:
               
chr5:43815738-43815576 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
166
               

               
Alignm identity:
               
120
               

               
Alignm E-value:
               
2e-23
               

               
Alignm gaps (pig, cow):
               
62, 0
               

               
Conread position:
               
509-664
               

               
Cow position:
               
chr5:6962002-6962157 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
158
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
6, 74
               

               
Conread position:
               
509-664
               

               
Cow position:
               
chr5:61593353-61593503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
141, 22
               

               
Conread position:
               
514-670
               

               
Cow position:
               
chr5:41639504-41639350 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
157
               

               
Alignm identity:
               
115
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
68, 0
               

               
Conread position:
               
514-677
               

               
Cow position:
               
chr5:25446977-25447136 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
165
               

               
Alignm identity:
               
123
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
49, 33
               

               
Conread position:
               
519-677
               

               
Cow position:
               
chr5:52153012-52152857 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
159
               

               
Alignm identity:
               
118
               

               
Alignm E-value:
               
7e-25
               

               
Alignm gaps (pig, cow):
               
61, 0
               

               
Conread position:
               
523-672
               

               
Cow position:
               
chr5:72867151-72867298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
150
               

               
Alignm identity:
               
113
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
59, 0
               

               
Conread position:
               
525-665
               

               
Cow position:
               
chr5:44582666-44582522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
146
               

               
Alignm identity:
               
111
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
18, 137
               

               
Conread position:
               
526-652
               

               
Cow position:
               
chr5:40740225-40740100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
128
               

               
Alignm identity:
               
100
               

               
Alignm E-value:
               
2e-22
               

               
Alignm gaps (pig, cow):
               
42, 57
               

               
Conread position:
               
527-664
               

               
Cow position:
               
chr5:74690149-74690014 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
138
               

               
Alignm identity:
               
106
               

               
Alignm E-value:
               
2e-24
               

               
Alignm gaps (pig, cow):
               
55, 0
               

               
Conread position:
               
527-674
               

               
Cow position:
               
chr5:56428469-56428320 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
152
               

               
Alignm identity:
               
116
               

               
Alignm E-value:
               
7e-24
               

               
Alignm gaps (pig, cow):
               
116, 55
               

               
Conread position:
               
532-683
               

               
Cow position:
               
chr5:32672725-32672574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
154
               

               
Alignm identity:
               
114
               

               
Alignm E-value:
               
6e-23
               

               
Alignm gaps (pig, cow):
               
117, 50
               
Show alignments to all cow chromosomes.