Cow genome map


           Conread name:
           Ss1.1-ramn3511b_i2.5
        

               Conread position:
               221-419
               

               Cow position:
               chr20:19201817-19201618 (view UCSC Genome Browser custom track)
               

               Alignm length:
               205
               

               Alignm identity:
               148
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               52, 9
               

               Conread position:
               229-419
               

               Cow position:
               chr20:17841019-17840832 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               139
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               44, 9
               

               Conread position:
               233-420
               

               Cow position:
               chr20:24491754-24491943 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               137
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               13, 112
               

               Conread position:
               240-432
               

               Cow position:
               chr20:27407628-27407812 (view UCSC Genome Browser custom track)
               

               Alignm length:
               195
               

               Alignm identity:
               138
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               33, 52
               

               Conread position:
               245-420
               

               Cow position:
               chr20:13829522-13829346 (view UCSC Genome Browser custom track)
               

               Alignm length:
               182
               

               Alignm identity:
               131
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               30, 51
               

               Conread position:
               247-458
               

               Cow position:
               chr20:11751911-11751700 (view UCSC Genome Browser custom track)
               

               Alignm length:
               215
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               100, 9
               

               Conread position:
               253-415
               

               Cow position:
               chr20:23506188-23506026 (view UCSC Genome Browser custom track)
               

               Alignm length:
               167
               

               Alignm identity:
               121
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               136, 11
               

               Conread position:
               256-419
               

               Cow position:
               chr20:4891867-4892032 (view UCSC Genome Browser custom track)
               

               Alignm length:
               166
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               273-423
               

               Cow position:
               chr20:16977605-16977761 (view UCSC Genome Browser custom track)
               

               Alignm length:
               157
               

               Alignm identity:
               116
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               273-431
               

               Cow position:
               chr20:12581724-12581879 (view UCSC Genome Browser custom track)
               

               Alignm length:
               159
               

               Alignm identity:
               115
               

               Alignm E-value:
               8e-22
               

               Alignm gaps (pig, cow):
               105, 0
               
Show alignments to all cow chromosomes.