Cow genome map


           Conread name:
           Ss1.1-ramn3511b_i2.5
        

               Conread position:
               239-419
               

               Cow position:
               chr28:4159194-4159004 (view UCSC Genome Browser custom track)
               

               Alignm length:
               191
               

               Alignm identity:
               134
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               34, 0
               

               Conread position:
               256-417
               

               Cow position:
               chr28:751440-751278 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               119
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               17, 81
               

               Conread position:
               256-419
               

               Cow position:
               chr28:19994736-19994901 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               125
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               119, 8
               

               Conread position:
               256-420
               

               Cow position:
               chr28:7557514-7557686 (view UCSC Genome Browser custom track)
               

               Alignm length:
               174
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               17, 109
               

               Conread position:
               258-415
               

               Cow position:
               chr28:8716172-8716335 (view UCSC Genome Browser custom track)
               

               Alignm length:
               165
               

               Alignm identity:
               121
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               82, 7
               

               Conread position:
               258-420
               

               Cow position:
               chr28:7350861-7350702 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               126
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               15, 35
               

               Conread position:
               265-412
               

               Cow position:
               chr28:4884051-4884197 (view UCSC Genome Browser custom track)
               

               Alignm length:
               152
               

               Alignm identity:
               114
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               124, 82
               

               Conread position:
               265-420
               

               Cow position:
               chr28:3759199-3759038 (view UCSC Genome Browser custom track)
               

               Alignm length:
               162
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               272-410
               

               Cow position:
               chr28:3257185-3257046 (view UCSC Genome Browser custom track)
               

               Alignm length:
               143
               

               Alignm identity:
               109
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               117, 73
               

               Conread position:
               274-415
               

               Cow position:
               chr28:4077144-4077293 (view UCSC Genome Browser custom track)
               

               Alignm length:
               150
               

               Alignm identity:
               113
               

               Alignm E-value:
               6e-22
               

               Alignm gaps (pig, cow):
               61, 0
               
Show alignments to all cow chromosomes.