Cow genome map
| Conread name: | Ss1.1-ramn3511b_i2.5 |
| Conread position: | 205-419 |
| Cow position: | chrX:4403607-4403388 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 152 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 61, 34 |
| Conread position: | 222-420 |
| Cow position: | chrX:42087098-42086897 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 26, 14 |
| Conread position: | 233-420 |
| Cow position: | chrX:5118239-5118428 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 10, 34 |
| Conread position: | 243-420 |
| Cow position: | chrX:42380861-42381042 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 14, 57 |
| Conread position: | 250-419 |
| Cow position: | chrX:25815658-25815830 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 122 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 116, 0 |
| Conread position: | 256-415 |
| Cow position: | chrX:31480201-31480043 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 114, 91 |
| Conread position: | 256-419 |
| Cow position: | chrX:47100356-47100526 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 256-431 |
| Cow position: | chrX:19394790-19394612 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 125 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 133, 91 |
| Conread position: | 256-431 |
| Cow position: | chrX:34412085-34411905 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 17, 109 |
| Conread position: | 256-458 |
| Cow position: | chrX:14135910-14135712 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 133, 90 |
| Conread position: | 258-420 |
| Cow position: | chrX:22115081-22115247 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 123 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 42, 90 |
| Conread position: | 258-420 |
| Cow position: | chrX:31983343-31983515 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 127 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 258-431 |
| Cow position: | chrX:27668729-27668899 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 124 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 124, 52 |
| Conread position: | 258-438 |
| Cow position: | chrX:20957472-20957290 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 131, 88 |
| Conread position: | 265-419 |
| Cow position: | chrX:296618-296462 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 116 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 124, 68 |
| Conread position: | 265-421 |
| Cow position: | chrX:10251976-10252131 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 124, 96 |
| Conread position: | 265-456 |
| Cow position: | chrX:24365596-24365789 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 124, 68 |
| Conread position: | 265-458 |
| Cow position: | chrX:32821266-32821059 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 265-460 |
| Cow position: | chrX:28940470-28940272 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 124, 79 |
| Conread position: | 273-420 |
| Cow position: | chrX:6480377-6480526 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 113 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 116, 60 |
| Conread position: | 274-418 |
| Cow position: | chrX:7648195-7648338 (view UCSC Genome Browser custom track) |
| Alignm length: | 146 |
| Alignm identity: | 111 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 21, 95 |
Show alignments to all cow chromosomes.