Cow genome map


           Conread name:
           Ss1.1-raor029_h22.5
        

               Conread position:
               1-380
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               216
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               303, 87
               

               Conread position:
               1-460
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               269
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               42, 25
               

               Conread position:
               1-479
               

               Cow position:
               
               

               Alignm length:
               491
               

               Alignm identity:
               324
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 23
               

               Conread position:
               1-514
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 105
               

               Conread position:
               1-514
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 0
               

               Conread position:
               1-516
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               367
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               74, 105
               

               Conread position:
               41-512
               

               Cow position:
               
               

               Alignm length:
               482
               

               Alignm identity:
               311
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               37, 65
               

               Conread position:
               73-346
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               173
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               17, 28
               

               Conread position:
               73-471
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 45
               

               Conread position:
               73-511
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 24
               

               Conread position:
               78-512
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               277
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               11, 20
               

               Conread position:
               79-524
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               276
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               10, 18
               

               Conread position:
               111-514
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 14
               

               Conread position:
               117-516
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               117-517
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               69, 75
               

               Conread position:
               117-524
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               261
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               65, 75
               

               Conread position:
               122-504
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               81, 74
               

               Conread position:
               129-420
               

               Cow position:
               
               

               Alignm length:
               294
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               123, 130
               

               Conread position:
               162-514
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               226
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               162-524
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               24, 31
               

               Conread position:
               183-513
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               55, 48
               

               Conread position:
               206-511
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               200
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               257-515
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               182
               

               Alignm E-value:
               8.99998e-41
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               271-521
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               200, 0
               

               Conread position:
               303-514
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               55, 66
               
Show alignments to all cow chromosomes.