Cow genome map


           Conread name:
           Ss1.1-raor029_h22.5
        

               Conread position:
               42-465
               

               Cow position:
               
               

               Alignm length:
               432
               

               Alignm identity:
               268
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               41, 70
               

               Conread position:
               42-467
               

               Cow position:
               
               

               Alignm length:
               436
               

               Alignm identity:
               274
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               39, 79
               

               Conread position:
               42-515
               

               Cow position:
               
               

               Alignm length:
               489
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               35, 79
               

               Conread position:
               42-526
               

               Cow position:
               
               

               Alignm length:
               506
               

               Alignm identity:
               318
               

               Alignm E-value:
               5e-36
               

               Alignm gaps (pig, cow):
               30, 69
               

               Conread position:
               54-420
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               21, 151
               

               Conread position:
               71-524
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 27
               

               Conread position:
               73-469
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               17, 24
               

               Conread position:
               73-478
               

               Cow position:
               
               

               Alignm length:
               409
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               327, 17
               

               Conread position:
               73-513
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               17, 39
               

               Conread position:
               74-469
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               248
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               61, 111
               

               Conread position:
               74-526
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               293
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               85, 120
               

               Conread position:
               75-454
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               10, 21
               

               Conread position:
               75-476
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               232, 225
               

               Conread position:
               75-501
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               279
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               11, 22
               

               Conread position:
               75-512
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               263
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               13, 22
               

               Conread position:
               75-512
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               262
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               13, 22
               

               Conread position:
               75-528
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               294
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               93, 102
               

               Conread position:
               75-528
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               10, 22
               

               Conread position:
               78-503
               

               Cow position:
               
               

               Alignm length:
               430
               

               Alignm identity:
               261
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               11, 24
               

               Conread position:
               78-513
               

               Cow position:
               
               

               Alignm length:
               437
               

               Alignm identity:
               289
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               21, 34
               

               Conread position:
               81-524
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               269
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               286, 66
               

               Conread position:
               91-511
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               250
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               83, 96
               

               Conread position:
               96-482
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               254
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               155, 21
               

               Conread position:
               111-511
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               256
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               81, 91
               

               Conread position:
               114-516
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               265
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 67
               

               Conread position:
               115-513
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               157, 148
               

               Conread position:
               115-515
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               257
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               116-315
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               133
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               116-386
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               179
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               170, 149
               

               Conread position:
               116-467
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               222
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               103, 0
               

               Conread position:
               117-526
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               251
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               85, 66
               

               Conread position:
               128-515
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               245
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               122, 129
               

               Conread position:
               129-523
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               136-514
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               261
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               340, 43
               

               Conread position:
               141-516
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               243
               

               Alignm E-value:
               8.00001e-41
               

               Alignm gaps (pig, cow):
               109, 116
               

               Conread position:
               141-526
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               55, 61
               

               Conread position:
               201-429
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               65, 71
               

               Conread position:
               201-503
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               191
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               190, 183
               

               Conread position:
               235-509
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               71, 0
               

               Conread position:
               284-514
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               160
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               152, 134
               

               Conread position:
               287-512
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               25, 0
               
Show alignments to all cow chromosomes.