Cow genome map

Conread name: Ss1.1-raor029_h22.5

Conread position: 1-485
Cow position:
Alignm length: 499
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 25, 42

Conread position: 1-493
Cow position:
Alignm length: 506
Alignm identity: 326
Alignm E-value: 0
Alignm gaps (pig, cow): 23, 37

Conread position: 1-508
Cow position:
Alignm length: 521
Alignm identity: 339
Alignm E-value: 0
Alignm gaps (pig, cow): 42, 35

Conread position: 1-510
Cow position:
Alignm length: 519
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 0

Conread position: 1-511
Cow position:
Alignm length: 522
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 120

Conread position: 1-512
Cow position:
Alignm length: 523
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 40

Conread position: 1-513
Cow position:
Alignm length: 523
Alignm identity: 338
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 110

Conread position: 1-514
Cow position:
Alignm length: 524
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 74, 105

Conread position: 1-519
Cow position:
Alignm length: 530
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 83, 273

Conread position: 1-520
Cow position:
Alignm length: 533
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 42

Conread position: 1-523
Cow position:
Alignm length: 534
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 283

Conread position: 1-524
Cow position:
Alignm length: 533
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 0

Conread position: 1-524
Cow position:
Alignm length: 535
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 54, 44

Conread position: 1-524
Cow position:
Alignm length: 534
Alignm identity: 365
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 439

Conread position: 1-524
Cow position:
Alignm length: 535
Alignm identity: 354
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 42

Conread position: 1-525
Cow position:
Alignm length: 537
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 73, 100

Conread position: 1-526
Cow position:
Alignm length: 536
Alignm identity: 335
Alignm E-value: 0
Alignm gaps (pig, cow): 76, 104

Conread position: 1-528
Cow position:
Alignm length: 539
Alignm identity: 373
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 37

Conread position: 3-477
Cow position:
Alignm length: 485
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 269

Conread position: 3-484
Cow position:
Alignm length: 491
Alignm identity: 341
Alignm E-value: 0
Alignm gaps (pig, cow): 81, 0

Conread position: 3-511
Cow position:
Alignm length: 520
Alignm identity: 324
Alignm E-value: 5.99994e-41
Alignm gaps (pig, cow): 30, 39

Conread position: 3-511
Cow position:
Alignm length: 520
Alignm identity: 372
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 52

Conread position: 3-512
Cow position:
Alignm length: 520
Alignm identity: 358
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 52

Conread position: 3-523
Cow position:
Alignm length: 531
Alignm identity: 360
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 52

Conread position: 3-524
Cow position:
Alignm length: 533
Alignm identity: 377
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 52

Conread position: 3-524
Cow position:
Alignm length: 534
Alignm identity: 357
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 40

Conread position: 3-525
Cow position:
Alignm length: 533
Alignm identity: 361
Alignm E-value: 0
Alignm gaps (pig, cow): 78, 104

Conread position: 42-406
Cow position:
Alignm length: 375
Alignm identity: 264
Alignm E-value: 0
Alignm gaps (pig, cow): 39, 65

Conread position: 42-514
Cow position:
Alignm length: 484
Alignm identity: 332
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 233

Conread position: 47-528
Cow position:
Alignm length: 483
Alignm identity: 327
Alignm E-value: 0
Alignm gaps (pig, cow): 205, 6

Conread position: 73-515
Cow position:
Alignm length: 444
Alignm identity: 289
Alignm E-value: 0
Alignm gaps (pig, cow): 202, 192

Conread position: 73-517
Cow position:
Alignm length: 448
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 129, 125

Conread position: 74-515
Cow position:
Alignm length: 442
Alignm identity: 286
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 74-524
Cow position:
Alignm length: 453
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 24

Conread position: 74-528
Cow position:
Alignm length: 455
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 75-516
Cow position:
Alignm length: 445
Alignm identity: 313
Alignm E-value: 0
Alignm gaps (pig, cow): 14, 19

Conread position: 75-524
Cow position:
Alignm length: 451
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 36

Conread position: 76-524
Cow position:
Alignm length: 450
Alignm identity: 314
Alignm E-value: 0
Alignm gaps (pig, cow): 30, 36

Conread position: 107-524
Cow position:
Alignm length: 418
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 109-515
Cow position:
Alignm length: 408
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 168, 145

Conread position: 115-513
Cow position:
Alignm length: 400
Alignm identity: 261
Alignm E-value: 2.8026e-45
Alignm gaps (pig, cow): 324, 31

Conread position: 143-514
Cow position:
Alignm length: 372
Alignm identity: 263
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 184-524
Cow position:
Alignm length: 343
Alignm identity: 228
Alignm E-value: 1.99993e-41
Alignm gaps (pig, cow): 241, 254

Conread position: 192-505
Cow position:
Alignm length: 314
Alignm identity: 212
Alignm E-value: 2.00386e-43
Alignm gaps (pig, cow): 0, 0

Conread position: 196-526
Cow position:
Alignm length: 332
Alignm identity: 232
Alignm E-value: 0
Alignm gaps (pig, cow): 20, 13

Conread position: 222-524
Cow position:
Alignm length: 303
Alignm identity: 196
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 28, 0

Conread position: 363-526
Cow position:
Alignm length: 164
Alignm identity: 117
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Show alignments to all cow chromosomes.