Cow genome map
| Conread name: | Ss1.1-raor029_h22.5 |
| Conread position: | 1-485 |
| Cow position: | chr17:22452105-22451612 (view UCSC Genome Browser custom track) |
| Alignm length: | 499 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 25, 42 |
| Conread position: | 1-493 |
| Cow position: | chr17:22499035-22498532 (view UCSC Genome Browser custom track) |
| Alignm length: | 506 |
| Alignm identity: | 326 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 37 |
| Conread position: | 1-508 |
| Cow position: | chr17:22452189-22451673 (view UCSC Genome Browser custom track) |
| Alignm length: | 521 |
| Alignm identity: | 339 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 42, 35 |
| Conread position: | 1-510 |
| Cow position: | chr17:22589910-22589392 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 1-511 |
| Cow position: | chr17:22590162-22589643 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 120 |
| Conread position: | 1-512 |
| Cow position: | chr17:22552072-22551552 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 40 |
| Conread position: | 1-513 |
| Cow position: | chr17:22590246-22589725 (view UCSC Genome Browser custom track) |
| Alignm length: | 523 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 110 |
| Conread position: | 1-514 |
| Cow position: | chr17:22552996-22552474 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 105 |
| Conread position: | 1-519 |
| Cow position: | chr17:22499287-22498759 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 83, 273 |
| Conread position: | 1-520 |
| Cow position: | chr17:22452357-22451829 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 33, 42 |
| Conread position: | 1-523 |
| Cow position: | chr17:22499371-22498840 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 283 |
| Conread position: | 1-524 |
| Cow position: | chr17:22552240-22551708 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 1-524 |
| Cow position: | chr17:22589826-22589294 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 44 |
| Conread position: | 1-524 |
| Cow position: | chr17:22589994-22589462 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 439 |
| Conread position: | 1-524 |
| Cow position: | chr17:22590078-22589546 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 354 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 42 |
| Conread position: | 1-525 |
| Cow position: | chr17:22552744-22552211 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 73, 100 |
| Conread position: | 1-526 |
| Cow position: | chr17:22499119-22498585 (view UCSC Genome Browser custom track) |
| Alignm length: | 536 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 76, 104 |
| Conread position: | 1-528 |
| Cow position: | chr17:22552660-22552124 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 373 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 32, 37 |
| Conread position: | 3-477 |
| Cow position: | chr17:22589656-22589173 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 269 |
| Conread position: | 3-484 |
| Cow position: | chr17:22551986-22551496 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 3-511 |
| Cow position: | chr17:22473444-22473962 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 324 |
| Alignm E-value: | 5.99994e-41 |
| Alignm gaps (pig, cow): | 30, 39 |
| Conread position: | 3-511 |
| Cow position: | chr17:22552910-22552393 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 52 |
| Conread position: | 3-512 |
| Cow position: | chr17:22552154-22551636 (view UCSC Genome Browser custom track) |
| Alignm length: | 520 |
| Alignm identity: | 358 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 52 |
| Conread position: | 3-523 |
| Cow position: | chr17:22552826-22552297 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 360 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 52 |
| Conread position: | 3-524 |
| Cow position: | chr17:22552406-22551876 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 377 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 48, 52 |
| Conread position: | 3-524 |
| Cow position: | chr17:22589740-22589210 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 357 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 40 |
| Conread position: | 3-525 |
| Cow position: | chr17:22552574-22552043 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 361 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 78, 104 |
| Conread position: | 42-406 |
| Cow position: | chr17:22551863-22551490 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 264 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 39, 65 |
| Conread position: | 42-514 |
| Cow position: | chr17:22452232-22451751 (view UCSC Genome Browser custom track) |
| Alignm length: | 484 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 40, 233 |
| Conread position: | 47-528 |
| Cow position: | chr17:22553192-22552712 (view UCSC Genome Browser custom track) |
| Alignm length: | 483 |
| Alignm identity: | 327 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 205, 6 |
| Conread position: | 73-515 |
| Cow position: | chr17:22473439-22473881 (view UCSC Genome Browser custom track) |
| Alignm length: | 444 |
| Alignm identity: | 289 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 202, 192 |
| Conread position: | 73-517 |
| Cow position: | chr17:22473271-22473715 (view UCSC Genome Browser custom track) |
| Alignm length: | 448 |
| Alignm identity: | 299 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 129, 125 |
| Conread position: | 74-515 |
| Cow position: | chr17:22499121-22498680 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 286 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 74-524 |
| Cow position: | chr17:22553082-22552632 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 319 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 24 |
| Conread position: | 74-528 |
| Cow position: | chr17:22552242-22551788 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 324 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 75-516 |
| Cow position: | chr17:22473357-22473798 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 313 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 14, 19 |
| Conread position: | 75-524 |
| Cow position: | chr17:22590247-22589798 (view UCSC Genome Browser custom track) |
| Alignm length: | 451 |
| Alignm identity: | 304 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 19, 36 |
| Conread position: | 76-524 |
| Cow position: | chr17:22552996-22552548 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 314 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 36 |
| Conread position: | 107-524 |
| Cow position: | chr17:22590299-22589882 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 290 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 109-515 |
| Cow position: | chr17:22452408-22452002 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 277 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 168, 145 |
| Conread position: | 115-513 |
| Cow position: | chr17:22473232-22473627 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 261 |
| Alignm E-value: | 2.8026e-45 |
| Alignm gaps (pig, cow): | 324, 31 |
| Conread position: | 143-514 |
| Cow position: | chr17:22499388-22499017 (view UCSC Genome Browser custom track) |
| Alignm length: | 372 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 184-524 |
| Cow position: | chr17:22590306-22589966 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 228 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 241, 254 |
| Conread position: | 192-505 |
| Cow position: | chr17:22452409-22452096 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 212 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 196-526 |
| Cow position: | chr17:22499419-22499089 (view UCSC Genome Browser custom track) |
| Alignm length: | 332 |
| Alignm identity: | 232 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 20, 13 |
| Conread position: | 222-524 |
| Cow position: | chr17:22473174-22473470 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 196 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 363-526 |
| Cow position: | chr17:22590295-22590132 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.