Cow genome map
Conread name: | Ss1.1-raor029_h22.5 |
Conread position: | 1-331 |
Cow position: | chr19:23597390-23597730 (view UCSC Genome Browser custom track) |
Alignm length: | 346 |
Alignm identity: | 230 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 32, 37 |
Conread position: | 1-460 |
Cow position: | chr19:14940601-14941069 (view UCSC Genome Browser custom track) |
Alignm length: | 470 |
Alignm identity: | 307 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 74, 121 |
Conread position: | 1-508 |
Cow position: | chr19:23649663-23650179 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 104 |
Conread position: | 1-511 |
Cow position: | chr19:14940013-14940532 (view UCSC Genome Browser custom track) |
Alignm length: | 520 |
Alignm identity: | 363 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 0 |
Conread position: | 1-513 |
Cow position: | chr19:23613709-23614230 (view UCSC Genome Browser custom track) |
Alignm length: | 527 |
Alignm identity: | 360 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 42 |
Conread position: | 1-513 |
Cow position: | chr19:23649747-23650268 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 342 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 105 |
Conread position: | 1-513 |
Cow position: | chr19:23649915-23650436 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 341 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 31, 37 |
Conread position: | 1-514 |
Cow position: | chr19:14940265-14940787 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 112 |
Conread position: | 1-514 |
Cow position: | chr19:14960366-14959846 (view UCSC Genome Browser custom track) |
Alignm length: | 525 |
Alignm identity: | 353 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 22 |
Conread position: | 1-514 |
Cow position: | chr19:23614297-23614819 (view UCSC Genome Browser custom track) |
Alignm length: | 524 |
Alignm identity: | 347 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 81, 344 |
Conread position: | 1-514 |
Cow position: | chr19:23614549-23615071 (view UCSC Genome Browser custom track) |
Alignm length: | 526 |
Alignm identity: | 345 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 32, 42 |
Conread position: | 1-517 |
Cow position: | chr19:14960282-14959761 (view UCSC Genome Browser custom track) |
Alignm length: | 528 |
Alignm identity: | 349 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 105 |
Conread position: | 1-523 |
Cow position: | chr19:14940349-14940880 (view UCSC Genome Browser custom track) |
Alignm length: | 533 |
Alignm identity: | 356 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 65, 192 |
Conread position: | 1-524 |
Cow position: | chr19:14940181-14940713 (view UCSC Genome Browser custom track) |
Alignm length: | 534 |
Alignm identity: | 370 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 75, 105 |
Conread position: | 1-524 |
Cow position: | chr19:23614045-23614577 (view UCSC Genome Browser custom track) |
Alignm length: | 533 |
Alignm identity: | 352 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 0 |
Conread position: | 1-528 |
Cow position: | chr19:14959544-14959023 (view UCSC Genome Browser custom track) |
Alignm length: | 541 |
Alignm identity: | 348 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 71, 119 |
Conread position: | 2-479 |
Cow position: | chr19:23650000-23650486 (view UCSC Genome Browser custom track) |
Alignm length: | 490 |
Alignm identity: | 313 |
Alignm E-value: | 2.94273e-44 |
Alignm gaps (pig, cow): | 48, 53 |
Conread position: | 3-351 |
Cow position: | chr19:14948356-14947999 (view UCSC Genome Browser custom track) |
Alignm length: | 360 |
Alignm identity: | 227 |
Alignm E-value: | 1e-25 |
Alignm gaps (pig, cow): | 72, 119 |
Conread position: | 3-395 |
Cow position: | chr19:23614719-23615118 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 276 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 132 |
Conread position: | 3-511 |
Cow position: | chr19:23613627-23614144 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 355 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 282 |
Conread position: | 3-511 |
Cow position: | chr19:23613879-23614396 (view UCSC Genome Browser custom track) |
Alignm length: | 519 |
Alignm identity: | 354 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 71, 112 |
Conread position: | 3-514 |
Cow position: | chr19:14940435-14940955 (view UCSC Genome Browser custom track) |
Alignm length: | 523 |
Alignm identity: | 351 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 69, 115 |
Conread position: | 3-514 |
Cow position: | chr19:20635522-20635002 (view UCSC Genome Browser custom track) |
Alignm length: | 523 |
Alignm identity: | 333 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 80, 270 |
Conread position: | 3-514 |
Cow position: | chr19:23614467-23614987 (view UCSC Genome Browser custom track) |
Alignm length: | 523 |
Alignm identity: | 362 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 118 |
Conread position: | 3-524 |
Cow position: | chr19:23613795-23614325 (view UCSC Genome Browser custom track) |
Alignm length: | 533 |
Alignm identity: | 369 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 40 |
Conread position: | 3-524 |
Cow position: | chr19:43570355-43569835 (view UCSC Genome Browser custom track) |
Alignm length: | 528 |
Alignm identity: | 357 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 41 |
Conread position: | 8-513 |
Cow position: | chr19:23597061-23597575 (view UCSC Genome Browser custom track) |
Alignm length: | 517 |
Alignm identity: | 340 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 34 |
Conread position: | 37-512 |
Cow position: | chr19:23649447-23649931 (view UCSC Genome Browser custom track) |
Alignm length: | 487 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 44, 69 |
Conread position: | 42-392 |
Cow position: | chr19:14959176-14958823 (view UCSC Genome Browser custom track) |
Alignm length: | 355 |
Alignm identity: | 236 |
Alignm E-value: | 3.00018e-42 |
Alignm gaps (pig, cow): | 41, 217 |
Conread position: | 42-397 |
Cow position: | chr19:23597347-23597711 (view UCSC Genome Browser custom track) |
Alignm length: | 366 |
Alignm identity: | 241 |
Alignm E-value: | 6e-39 |
Alignm gaps (pig, cow): | 39, 64 |
Conread position: | 42-475 |
Cow position: | chr19:23597263-23597705 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 33, 66 |
Conread position: | 42-480 |
Cow position: | chr19:14959741-14959308 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 53, 29 |
Conread position: | 42-513 |
Cow position: | chr19:20677513-20677993 (view UCSC Genome Browser custom track) |
Alignm length: | 481 |
Alignm identity: | 325 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 41, 0 |
Conread position: | 42-514 |
Cow position: | chr19:14959335-14958869 (view UCSC Genome Browser custom track) |
Alignm length: | 475 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 73, 50 |
Conread position: | 42-515 |
Cow position: | chr19:20678101-20678583 (view UCSC Genome Browser custom track) |
Alignm length: | 485 |
Alignm identity: | 324 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 42, 263 |
Conread position: | 42-527 |
Cow position: | chr19:23613582-23614076 (view UCSC Genome Browser custom track) |
Alignm length: | 495 |
Alignm identity: | 339 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 30, 0 |
Conread position: | 47-514 |
Cow position: | chr19:20635646-20635170 (view UCSC Genome Browser custom track) |
Alignm length: | 478 |
Alignm identity: | 313 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 35, 394 |
Conread position: | 73-373 |
Cow position: | chr19:43569950-43569654 (view UCSC Genome Browser custom track) |
Alignm length: | 303 |
Alignm identity: | 212 |
Alignm E-value: | 7.00005e-41 |
Alignm gaps (pig, cow): | 17, 39 |
Conread position: | 73-447 |
Cow position: | chr19:14916069-14916438 (view UCSC Genome Browser custom track) |
Alignm length: | 378 |
Alignm identity: | 242 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 15, 25 |
Conread position: | 73-477 |
Cow position: | chr19:23614714-23615118 (view UCSC Genome Browser custom track) |
Alignm length: | 408 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 192, 202 |
Conread position: | 73-513 |
Cow position: | chr19:23613454-23613894 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 301 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 23 |
Conread position: | 73-514 |
Cow position: | chr19:23614294-23614735 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 298 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 17, 27 |
Conread position: | 73-514 |
Cow position: | chr19:23649576-23650017 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 310 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 23 |
Conread position: | 73-515 |
Cow position: | chr19:14940598-14941040 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 305 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 129, 122 |
Conread position: | 73-524 |
Cow position: | chr19:23614210-23614661 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 74-514 |
Cow position: | chr19:14948443-14948004 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 16, 38 |
Conread position: | 74-514 |
Cow position: | chr19:23614043-23614483 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 74-525 |
Cow position: | chr19:43570117-43569670 (view UCSC Genome Browser custom track) |
Alignm length: | 454 |
Alignm identity: | 292 |
Alignm E-value: | 1.4013e-45 |
Alignm gaps (pig, cow): | 191, 204 |
Conread position: | 74-528 |
Cow position: | chr19:23613539-23613993 (view UCSC Genome Browser custom track) |
Alignm length: | 455 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 75-511 |
Cow position: | chr19:14940180-14940616 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 175, 182 |
Conread position: | 75-511 |
Cow position: | chr19:20678059-20678495 (view UCSC Genome Browser custom track) |
Alignm length: | 438 |
Alignm identity: | 295 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 20 |
Conread position: | 75-511 |
Cow position: | chr19:20678227-20678663 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 306 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 21 |
Conread position: | 75-512 |
Cow position: | chr19:20677639-20678076 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 17 |
Conread position: | 75-513 |
Cow position: | chr19:14940012-14940450 (view UCSC Genome Browser custom track) |
Alignm length: | 439 |
Alignm identity: | 299 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 75-513 |
Cow position: | chr19:20677891-20678329 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 14, 21 |
Conread position: | 75-514 |
Cow position: | chr19:23649662-23650101 (view UCSC Genome Browser custom track) |
Alignm length: | 443 |
Alignm identity: | 297 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 22 |
Conread position: | 75-514 |
Cow position: | chr19:23649914-23650353 (view UCSC Genome Browser custom track) |
Alignm length: | 441 |
Alignm identity: | 300 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 200, 193 |
Conread position: | 75-515 |
Cow position: | chr19:14960367-14959929 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 29, 23 |
Conread position: | 75-515 |
Cow position: | chr19:20677807-20678247 (view UCSC Genome Browser custom track) |
Alignm length: | 446 |
Alignm identity: | 294 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 37 |
Conread position: | 75-515 |
Cow position: | chr19:23596972-23597409 (view UCSC Genome Browser custom track) |
Alignm length: | 442 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 200, 67 |
Conread position: | 75-516 |
Cow position: | chr19:20677471-20677912 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 293 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 15, 29 |
Conread position: | 75-516 |
Cow position: | chr19:20678311-20678749 (view UCSC Genome Browser custom track) |
Alignm length: | 445 |
Alignm identity: | 290 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 25, 17 |
Conread position: | 75-516 |
Cow position: | chr19:23597221-23597663 (view UCSC Genome Browser custom track) |
Alignm length: | 444 |
Alignm identity: | 311 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 198, 193 |
Conread position: | 77-528 |
Cow position: | chr19:23613374-23613825 (view UCSC Genome Browser custom track) |
Alignm length: | 453 |
Alignm identity: | 308 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 13, 21 |
Conread position: | 78-528 |
Cow position: | chr19:14960448-14960000 (view UCSC Genome Browser custom track) |
Alignm length: | 452 |
Alignm identity: | 321 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 19 |
Conread position: | 109-515 |
Cow position: | chr19:23649444-23649850 (view UCSC Genome Browser custom track) |
Alignm length: | 407 |
Alignm identity: | 268 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 114-514 |
Cow position: | chr19:14939968-14940367 (view UCSC Genome Browser custom track) |
Alignm length: | 401 |
Alignm identity: | 284 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 6, 0 |
Conread position: | 114-518 |
Cow position: | chr19:20677762-20678166 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 116-473 |
Cow position: | chr19:14959177-14958826 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 235 |
Alignm E-value: | 7e-40 |
Alignm gaps (pig, cow): | 59, 0 |
Conread position: | 117-527 |
Cow position: | chr19:23597095-23597505 (view UCSC Genome Browser custom track) |
Alignm length: | 411 |
Alignm identity: | 267 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 122-524 |
Cow position: | chr19:14959582-14959189 (view UCSC Genome Browser custom track) |
Alignm length: | 405 |
Alignm identity: | 258 |
Alignm E-value: | 3e-33 |
Alignm gaps (pig, cow): | 80, 75 |
Conread position: | 123-514 |
Cow position: | chr19:20635477-20635086 (view UCSC Genome Browser custom track) |
Alignm length: | 394 |
Alignm identity: | 271 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 166, 175 |
Conread position: | 123-514 |
Cow position: | chr19:43570394-43570013 (view UCSC Genome Browser custom track) |
Alignm length: | 393 |
Alignm identity: | 260 |
Alignm E-value: | 8.99634e-43 |
Alignm gaps (pig, cow): | 156, 118 |
Conread position: | 126-511 |
Cow position: | chr19:14915953-14916335 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 15 |
Conread position: | 128-515 |
Cow position: | chr19:20677440-20677827 (view UCSC Genome Browser custom track) |
Alignm length: | 388 |
Alignm identity: | 253 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 135-514 |
Cow position: | chr19:23649302-23649681 (view UCSC Genome Browser custom track) |
Alignm length: | 380 |
Alignm identity: | 245 |
Alignm E-value: | 2.99878e-43 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 141-526 |
Cow position: | chr19:23613354-23613739 (view UCSC Genome Browser custom track) |
Alignm length: | 386 |
Alignm identity: | 269 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 147-514 |
Cow position: | chr19:23649398-23649765 (view UCSC Genome Browser custom track) |
Alignm length: | 368 |
Alignm identity: | 258 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 148-497 |
Cow position: | chr19:43570615-43570271 (view UCSC Genome Browser custom track) |
Alignm length: | 353 |
Alignm identity: | 220 |
Alignm E-value: | 3e-22 |
Alignm gaps (pig, cow): | 22, 32 |
Conread position: | 152-516 |
Cow position: | chr19:20635700-20635336 (view UCSC Genome Browser custom track) |
Alignm length: | 367 |
Alignm identity: | 246 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 52, 44 |
Conread position: | 159-513 |
Cow position: | chr19:14959711-14959359 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 229 |
Alignm E-value: | 1e-35 |
Alignm gaps (pig, cow): | 114, 60 |
Conread position: | 201-515 |
Cow position: | chr19:14948484-14948171 (view UCSC Genome Browser custom track) |
Alignm length: | 315 |
Alignm identity: | 211 |
Alignm E-value: | 7.00005e-41 |
Alignm gaps (pig, cow): | 81, 0 |
Conread position: | 206-514 |
Cow position: | chr19:23649289-23649597 (view UCSC Genome Browser custom track) |
Alignm length: | 310 |
Alignm identity: | 203 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 46, 53 |
Conread position: | 217-513 |
Cow position: | chr19:14960477-14960181 (view UCSC Genome Browser custom track) |
Alignm length: | 300 |
Alignm identity: | 218 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 12, 34 |
Conread position: | 219-478 |
Cow position: | chr19:20636116-20635860 (view UCSC Genome Browser custom track) |
Alignm length: | 260 |
Alignm identity: | 169 |
Alignm E-value: | 4e-25 |
Alignm gaps (pig, cow): | 67, 0 |
Conread position: | 219-524 |
Cow position: | chr19:14939988-14940293 (view UCSC Genome Browser custom track) |
Alignm length: | 306 |
Alignm identity: | 212 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 221-514 |
Cow position: | chr19:23613350-23613643 (view UCSC Genome Browser custom track) |
Alignm length: | 294 |
Alignm identity: | 193 |
Alignm E-value: | 1e-34 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 301-528 |
Cow position: | chr19:14939985-14940213 (view UCSC Genome Browser custom track) |
Alignm length: | 229 |
Alignm identity: | 158 |
Alignm E-value: | 3e-31 |
Alignm gaps (pig, cow): | 17, 0 |
Conread position: | 303-528 |
Cow position: | chr19:14960475-14960250 (view UCSC Genome Browser custom track) |
Alignm length: | 227 |
Alignm identity: | 161 |
Alignm E-value: | 3e-34 |
Alignm gaps (pig, cow): | 136, 131 |
Show alignments to all cow chromosomes.