Cow genome map

Conread name: Ss1.1-raor029_h22.5

Conread position: 1-473
Cow position:
Alignm length: 486
Alignm identity: 304
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 31, 42

Conread position: 1-479
Cow position:
Alignm length: 491
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 42

Conread position: 1-486
Cow position:
Alignm length: 487
Alignm identity: 324
Alignm E-value: 0
Alignm gaps (pig, cow): 422, 91

Conread position: 1-493
Cow position:
Alignm length: 495
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 54

Conread position: 1-506
Cow position:
Alignm length: 506
Alignm identity: 310
Alignm E-value: 0
Alignm gaps (pig, cow): 32, 0

Conread position: 1-512
Cow position:
Alignm length: 522
Alignm identity: 353
Alignm E-value: 0
Alignm gaps (pig, cow): 69, 106

Conread position: 1-513
Cow position:
Alignm length: 527
Alignm identity: 333
Alignm E-value: 1.99965e-42
Alignm gaps (pig, cow): 32, 42

Conread position: 1-515
Cow position:
Alignm length: 525
Alignm identity: 378
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 54

Conread position: 1-525
Cow position:
Alignm length: 535
Alignm identity: 369
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 54

Conread position: 1-526
Cow position:
Alignm length: 536
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 167

Conread position: 1-528
Cow position:
Alignm length: 538
Alignm identity: 359
Alignm E-value: 0
Alignm gaps (pig, cow): 80, 22

Conread position: 2-523
Cow position:
Alignm length: 535
Alignm identity: 366
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 53

Conread position: 3-462
Cow position:
Alignm length: 473
Alignm identity: 303
Alignm E-value: 1e-39
Alignm gaps (pig, cow): 40, 33

Conread position: 3-463
Cow position:
Alignm length: 478
Alignm identity: 294
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 19, 35

Conread position: 3-490
Cow position:
Alignm length: 499
Alignm identity: 301
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 85, 121

Conread position: 3-514
Cow position:
Alignm length: 525
Alignm identity: 324
Alignm E-value: 9e-37
Alignm gaps (pig, cow): 32, 19

Conread position: 31-528
Cow position:
Alignm length: 508
Alignm identity: 337
Alignm E-value: 0
Alignm gaps (pig, cow): 19, 11

Conread position: 42-512
Cow position:
Alignm length: 481
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 64

Conread position: 42-528
Cow position:
Alignm length: 488
Alignm identity: 325
Alignm E-value: 0
Alignm gaps (pig, cow): 13, 9

Conread position: 43-524
Cow position:
Alignm length: 491
Alignm identity: 300
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 7, 12

Conread position: 66-512
Cow position:
Alignm length: 454
Alignm identity: 298
Alignm E-value: 6.02558e-44
Alignm gaps (pig, cow): 50, 36

Conread position: 71-350
Cow position:
Alignm length: 282
Alignm identity: 187
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 5, 27

Conread position: 72-410
Cow position:
Alignm length: 340
Alignm identity: 235
Alignm E-value: 0
Alignm gaps (pig, cow): 28, 20

Conread position: 72-524
Cow position:
Alignm length: 454
Alignm identity: 266
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 13, 26

Conread position: 73-398
Cow position:
Alignm length: 327
Alignm identity: 229
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 24

Conread position: 73-515
Cow position:
Alignm length: 444
Alignm identity: 306
Alignm E-value: 0
Alignm gaps (pig, cow): 26, 19

Conread position: 73-524
Cow position:
Alignm length: 453
Alignm identity: 270
Alignm E-value: 0
Alignm gaps (pig, cow): 449, 0

Conread position: 73-526
Cow position:
Alignm length: 457
Alignm identity: 301
Alignm E-value: 0
Alignm gaps (pig, cow): 12, 32

Conread position: 73-526
Cow position:
Alignm length: 454
Alignm identity: 319
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 73-528
Cow position:
Alignm length: 456
Alignm identity: 320
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 74-447
Cow position:
Alignm length: 377
Alignm identity: 241
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 13, 23

Conread position: 74-511
Cow position:
Alignm length: 439
Alignm identity: 304
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 22

Conread position: 74-512
Cow position:
Alignm length: 441
Alignm identity: 299
Alignm E-value: 0
Alignm gaps (pig, cow): 17, 28

Conread position: 74-524
Cow position:
Alignm length: 452
Alignm identity: 328
Alignm E-value: 0
Alignm gaps (pig, cow): 16, 22

Conread position: 75-477
Cow position:
Alignm length: 405
Alignm identity: 269
Alignm E-value: 0
Alignm gaps (pig, cow): 396, 349

Conread position: 75-505
Cow position:
Alignm length: 435
Alignm identity: 269
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 15, 22

Conread position: 77-506
Cow position:
Alignm length: 432
Alignm identity: 290
Alignm E-value: 0
Alignm gaps (pig, cow): 11, 19

Conread position: 78-500
Cow position:
Alignm length: 425
Alignm identity: 277
Alignm E-value: 0
Alignm gaps (pig, cow): 257, 265

Conread position: 78-506
Cow position:
Alignm length: 435
Alignm identity: 285
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 93, 100

Conread position: 109-512
Cow position:
Alignm length: 405
Alignm identity: 280
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 0

Conread position: 110-520
Cow position:
Alignm length: 416
Alignm identity: 265
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 249, 71

Conread position: 116-526
Cow position:
Alignm length: 411
Alignm identity: 255
Alignm E-value: 6e-33
Alignm gaps (pig, cow): 17, 0

Conread position: 116-528
Cow position:
Alignm length: 414
Alignm identity: 266
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 202, 144

Conread position: 117-526
Cow position:
Alignm length: 413
Alignm identity: 255
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 98, 79

Conread position: 120-511
Cow position:
Alignm length: 395
Alignm identity: 240
Alignm E-value: 8e-26
Alignm gaps (pig, cow): 74, 84

Conread position: 120-524
Cow position:
Alignm length: 405
Alignm identity: 296
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 125-514
Cow position:
Alignm length: 397
Alignm identity: 265
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 5, 29

Conread position: 133-514
Cow position:
Alignm length: 385
Alignm identity: 241
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 7, 45

Conread position: 141-511
Cow position:
Alignm length: 371
Alignm identity: 265
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 145-515
Cow position:
Alignm length: 377
Alignm identity: 255
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 47, 35

Conread position: 148-526
Cow position:
Alignm length: 379
Alignm identity: 217
Alignm E-value: 4.99997e-41
Alignm gaps (pig, cow): 0, 0

Conread position: 153-526
Cow position:
Alignm length: 375
Alignm identity: 248
Alignm E-value: 7.00649e-45
Alignm gaps (pig, cow): 22, 83

Conread position: 159-514
Cow position:
Alignm length: 359
Alignm identity: 232
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 8, 20

Conread position: 182-511
Cow position:
Alignm length: 338
Alignm identity: 226
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 92, 48

Conread position: 220-514
Cow position:
Alignm length: 296
Alignm identity: 184
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 201, 210

Conread position: 222-502
Cow position:
Alignm length: 284
Alignm identity: 194
Alignm E-value: 7e-35
Alignm gaps (pig, cow): 32, 37

Conread position: 224-524
Cow position:
Alignm length: 301
Alignm identity: 209
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 300-515
Cow position:
Alignm length: 218
Alignm identity: 147
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 5, 150

Show alignments to all cow chromosomes.