Cow genome map


           Conread name:
           Ss1.1-raor029_h22.5
        

               Conread position:
               1-469
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               30, 22
               

               Conread position:
               1-477
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               320
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 467
               

               Conread position:
               1-506
               

               Cow position:
               
               

               Alignm length:
               507
               

               Alignm identity:
               340
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               356, 25
               

               Conread position:
               1-514
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               77, 104
               

               Conread position:
               1-514
               

               Cow position:
               
               

               Alignm length:
               524
               

               Alignm identity:
               339
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 202
               

               Conread position:
               1-515
               

               Cow position:
               
               

               Alignm length:
               526
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 22
               

               Conread position:
               1-528
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               363
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 358
               

               Conread position:
               42-436
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 59
               

               Conread position:
               42-516
               

               Cow position:
               
               

               Alignm length:
               483
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 377
               

               Conread position:
               42-526
               

               Cow position:
               
               

               Alignm length:
               495
               

               Alignm identity:
               335
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               33, 77
               

               Conread position:
               66-506
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               287
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               83, 31
               

               Conread position:
               72-525
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               292
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               17, 40
               

               Conread position:
               73-407
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               219
               

               Alignm E-value:
               5e-33
               

               Alignm gaps (pig, cow):
               100, 111
               

               Conread position:
               73-514
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               371, 33
               

               Conread position:
               73-514
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               196, 200
               

               Conread position:
               73-524
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 25
               

               Conread position:
               73-524
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               312
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               284, 277
               

               Conread position:
               74-395
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               218
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               18, 24
               

               Conread position:
               74-514
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 195
               

               Conread position:
               75-481
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               364, 356
               

               Conread position:
               75-514
               

               Cow position:
               
               

               Alignm length:
               441
               

               Alignm identity:
               301
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               200, 192
               

               Conread position:
               75-514
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               304
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 37
               

               Conread position:
               76-514
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               293
               

               Alignm E-value:
               2.00386e-43
               

               Alignm gaps (pig, cow):
               27, 12
               

               Conread position:
               107-511
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               273
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               84, 74
               

               Conread position:
               108-525
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               42, 17
               

               Conread position:
               111-514
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               80, 70
               

               Conread position:
               115-514
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               271
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               380, 134
               

               Conread position:
               115-514
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               259
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               242, 236
               

               Conread position:
               115-515
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               266
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               123-496
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               247
               

               Alignm E-value:
               9e-39
               

               Alignm gaps (pig, cow):
               243, 219
               

               Conread position:
               181-514
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               227
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               94, 86
               

               Conread position:
               181-515
               

               Cow position:
               
               

               Alignm length:
               336
               

               Alignm identity:
               225
               

               Alignm E-value:
               5.00264e-43
               

               Alignm gaps (pig, cow):
               94, 87
               

               Conread position:
               297-510
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               50, 0
               
Show alignments to all cow chromosomes.