Cow genome map
| Conread name: | Ss1.1-raor029_h22.5 |
| Conread position: | 1-513 |
| Cow position: | chr6:49340510-49341031 (view UCSC Genome Browser custom track) |
| Alignm length: | 524 |
| Alignm identity: | 351 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 74, 109 |
| Conread position: | 1-513 |
| Cow position: | chr6:49340846-49341367 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 37 |
| Conread position: | 1-514 |
| Cow position: | chr6:49340762-49341284 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 369 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 29, 37 |
| Conread position: | 2-516 |
| Cow position: | chr6:49396154-49396671 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 337 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 35 |
| Conread position: | 3-514 |
| Cow position: | chr6:49340428-49340948 (view UCSC Genome Browser custom track) |
| Alignm length: | 526 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 30, 35 |
| Conread position: | 3-514 |
| Cow position: | chr6:49340680-49341200 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 367 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 35 |
| Conread position: | 3-514 |
| Cow position: | chr6:49340932-49341451 (view UCSC Genome Browser custom track) |
| Alignm length: | 525 |
| Alignm identity: | 365 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 28, 35 |
| Conread position: | 42-515 |
| Cow position: | chr6:49395942-49396418 (view UCSC Genome Browser custom track) |
| Alignm length: | 485 |
| Alignm identity: | 300 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 33, 226 |
| Conread position: | 46-511 |
| Cow position: | chr6:49340317-49340777 (view UCSC Genome Browser custom track) |
| Alignm length: | 467 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 229, 12 |
| Conread position: | 73-511 |
| Cow position: | chr6:49340423-49340860 (view UCSC Genome Browser custom track) |
| Alignm length: | 441 |
| Alignm identity: | 311 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 17, 26 |
| Conread position: | 73-526 |
| Cow position: | chr6:49396396-49396849 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 286 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 14, 24 |
| Conread position: | 74-528 |
| Cow position: | chr6:49396313-49396767 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 287 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 15, 23 |
| Conread position: | 77-528 |
| Cow position: | chr6:49396070-49396515 (view UCSC Genome Browser custom track) |
| Alignm length: | 456 |
| Alignm identity: | 293 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 12, 38 |
| Conread position: | 78-505 |
| Cow position: | chr6:49396569-49396996 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 257 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 112-514 |
| Cow position: | chr6:49340218-49340612 (view UCSC Genome Browser custom track) |
| Alignm length: | 411 |
| Alignm identity: | 276 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 9, 73 |
| Conread position: | 114-514 |
| Cow position: | chr6:49428960-49429360 (view UCSC Genome Browser custom track) |
| Alignm length: | 403 |
| Alignm identity: | 244 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 142, 121 |
| Conread position: | 144-444 |
| Cow position: | chr6:49396719-49397020 (view UCSC Genome Browser custom track) |
| Alignm length: | 303 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 125, 131 |
| Conread position: | 201-528 |
| Cow position: | chr6:49429131-49429458 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 202 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 206-514 |
| Cow position: | chr6:49340388-49340696 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 69, 58 |
| Conread position: | 375-519 |
| Cow position: | chr6:49340389-49340533 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 107 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.